@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : OR1D4_HUMAN: (2016-01-12 )
MDGDNQSENSQFLLLGISESPEQQQILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMYFFLANLSFTDLFFVTNTIPKMLVNFQSQNKAISYAGCLTQLYFLVSLVTLDNLILAVMAYDRYVAICCPLHYVTAMSPGLCVLLLSLCWGLSVLYGLLLTFLLTRVTFCGPREIHYLFCDMYILLWLACSNTHIIHTALIATGCFIFLTLLGFMTTSYVRIVRTILQMPSASKKYKTFSTCASHLGVVSLFYGTLAMVYLQPLHTYSMKDSVATVMYAVLTPMMNPFIYSLRNKDMHGAPGRVLWRPFQRP

Atome Classification :

(20 SA) ------------........------.10.......-.--------20...-------.....30........40........50........60........70.--.....-..80........90........100.--......110.......120---.......--130.......-140.......150.......160-.------------.....------.170......-----.--180.......190.......200-...--------.....210.....--..220--........-------230--.-----------.--------------------.......240----..----------.....--------.250---.........260..------.-.----.---..270----..---...--------..280---.........290.......300....---...310----------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------MDGDNQSE------NSQFLLLGIS-E--------SPEQQ-------QILFWMFLSMYLVTVLGNVLIILAISSDSHLHTPMYFFLANLSFTDLF--FVTNT-IPKMLVNFQSQNKAISYAGCLTQLYF--LVSLVTLDNLILAVMAYDR---YVAICCP--LHYVTAMSPG-LCVLLLSLCWGLSVLYGLLLTFL-L------------TRVTF------CGPREIHYLF-----C--DMYILLWLACSNTHIIHTALIA--TGC--------FIFLTLLGFMTTS--YVRI---VRTILQMP-------S----A-----------S--------------------KKYKTFSTC-----AS----------HLGVV--------SL-----FYGTLAMVYLQPLH------T-Y----S---MKDSV----AT---VMY--------AVL-----TPMMNPFIYSLRNKDMHGAPGRVLWR---PFQRP-----------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 95.8522%-168 - C3 -4UHR AA2AR_HUMAN A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADIL--VGVLA-IPFAIA--ISTGFCAACHGCLFIACF--VLVLTASSIFSLLAIAIDR---YIAIRIP--LRYNGLVTGT-RAKGIIAICWVLSFAIG--LTPM-LGWNNCGQPKEGKA---G------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FLAA---RRQLKQME-------SQPLPG-----------E--------------------RARSTLQKE-----VH----------AAKSL--------AI-----IVGLFALCWL-PLHIINCF-T-F----F---CPDC-----HAPLWLMY--------LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS---HVLRQ-----------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 95.5922%-169 - C3 -2YDV ? A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADIL--VGVLA-IPFAIA--ISTGFCAACHGCLFIACF--VLVLTASSIFSLLAIAIDR---YIAIRIP--LRYNGLVTGT-RAKGIIAICWVLSFAIG--LTPM-LGWNNCGQPKEGKAHSQG------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FLAA---RRQLKQME-------SQ---------------------------------------STLQKE-----VH----------AAKSL--------AI-----IVGLFALCWL-PLHIINCF-T-F----F---CPDCS----HAPLWLMY--------LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS---HVLRQ-----------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 93.7223%-166 - C3 -3VG9 ? A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIA--VGVLA-IPFAIT--ISTGFCAACHGCLFIACF--VLVLTQSSIFSLLAIAIDR---YIAIRIP--LRYNGLVTGT-RAKGIIAICWVLSFAIG--LTPM-LGWNNCGQ-------SQG------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FLAA---RRQLKQME-------SQPLPG-----------E--------------------RARSTLQKE-----VH----------AAKSL--------AI-----IVGLFALCWL-PLHIINCF-T-F----F---CPDCS----HAPLWLMY--------LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS---HVLR------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 93.1122%-169 - C3 -2YDO ? A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADIL--VGVLA-IPFAIA--ISTGFCAACHGCLFIACF--VLVLTASSIFSLLAIAIDR---YIAIRIP--LRYNGLVTGT-RAKGIIAICWVLSFAIG--LTPM-LGWNNCGQPKEGKAHSQG------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FLAA---RRQLKQME-------S-----------------------------------------TLQKE-----VH----------AAKSL--------AI-----IVGLFALCWL-PLHIINCF-T-F----F---CPDCS----HAPLWLMY--------LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS---HVLRQ-----------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 92.6123%-167 - C3 -3VGA AA2AR_HUMAN A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIA--VGVLA-IPFAIT--ISTGFCAACHGCLFIACF--VLVLTQSSIFSLLAIAIDR---YIAIRIP--LRYNGLVTGT-RAKGIIAICWVLSFAIG--LTPM-LGWNNCGQ-------SQG------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FLAA---RRQLKQME-------SQPLPG-----------E--------------------RARSTLQKE-----VH----------AAKSL--------AI-----IVGLFALCWL-PLHIINCF-T-F----F---CPDCS----HAPLWLMY--------LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS---HVL-------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 92.2222%-172 - C3 -3RFM AA2AR_HUMAN A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIL--VGVLA-IPFAIT--ISTGFCAACHGCLFIACF--VLVLAQSSIFSLLAIAIDR---YIAIAIP--LRYNGLVTGT-RAAGIIAICWVLSFAIG--LTPM-LGWNNCGQP--------G------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FAAA---RRQLKQME-------SQPLPG-----------E--------------------RARSTLQKE-----VH----------AAKSA--------AI-----IAGLFALCWL-PLHIINCF-T-F----F---CPDCS----HA---PLWLMYLAIVLAHT-----NSVVNPFIYAYRIREFRQTFRKIIRS-------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 92.0422%-173 - C3 -3UZA AA2AR_HUMAN A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIL--VGVLA-IPFAIT--ISTGFCAACHGCLFIACF--VLVLAQSSIFSLLAIAIDR---YIAIAIP--LRYNGLVTGT-RAAGIIAICWVLSFAIG--LTPM-LGWNNCGQP--------G------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FAAA---RRQLKQME-------SQPLPG-----------E--------------------RARSTLQKE-----VH----------AAKSA--------AI-----IAGLFALCWL-PLHIINCF-T-F----F---CPDCS----HA---PLWLMYLAIVLAHT-----NSVVNPFIYAYRIREFRQTFRKIIRS-------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 91.6922%-172 - C3 -3REY AA2AR_HUMAN A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIL--VGVLA-IPFAIT--ISTGFCAACHGCLFIACF--VLVLAQSSIFSLLAIAIDR---YIAIAIP--LRYNGLVTGT-RAAGIIAICWVLSFAIG--LTPM-LGWNNCGQP--------G------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FAAA---RRQLKQME-------SQPLPG-----------E--------------------RARSTLQKE-----VH----------AAKSA--------AI-----IAGLFALCWL-PLHIINCF-T-F----F---CPDCS----HA---PLWLMYLAIVLAHT-----NSVVNPFIYAYRIREFRQTFRKIIRS-------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 91.5922%-172 - C3 -3PWH ? A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIL--VGVLA-IPFAIT--ISTGFCAACHGCLFIACF--VLVLAQSSIFSLLAIAIDR---YIAIAIP--LRYNGLVTGT-RAAGIIAICWVLSFAIG--LTPM-LGWNNCGQP--------G------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FAAA---RRQLKQME-------SQPLPG-----------E--------------------RARSTLQKE-----VH----------AAKSA--------AI-----IAGLFALCWL-PLHIINCF-T-F----F---CPDCS----HA---PLWLMYLAIVLAHT-----NSVVNPFIYAYRIREFRQTFRKIIRS-------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 91.1622%-172 - C3 -3UZC AA2AR_HUMAN A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIL--VGVLA-IPFAIT--ISTGFCAACHGCLFIACF--VLVLAQSSIFSLLAIAIDR---YIAIAIP--LRYNGLVTGT-RAAGIIAICWVLSFAIG--LTPM-LGWNNCGQP--------G------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FAAA---RRQLKQME-------SQPLPG-----------E--------------------RARSTLQKE-----VH----------AAKSA--------AI-----IAGLFALCWL-PLHIINCF-T-F----F---CPDCS----HA---PLWLMYLAIVLAHT-----NSVVNPFIYAYRIREFRQTFRKIIRS-------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 87.5722%-172 - C3 -4UG2 ? A:[14-296] -----------------------------------------------------------------LAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADIL--VGVLA-IPFAIA--ISTGFCAACHGCLFIACF--VLVLTASSIFSLLAIAIDR---YIAIRIP--LRYNGLVTGT-RAKGIIAICWVLSFAIG--LTPM-LGWNNCGQPKEGKAHSQG------CGEGQVACLF-----E--DVVPM-------NYMVYFNFFA--CVL--------VPLLLMLGVYLRI--FLAA---RRQL--------------------------------------------------ARSTLQKE-----VH----------AAKSL--------AI-----IVGLFALCWL-PLHIINCF-T-F----F---CPDCS----HAPLWLMY--------LAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS---HVLR------------------------------------------------------------------------------------------------------------------------------------------------
34 HHSearch 87.0018%-153 - C3 -2Z73 OPSD_TODPA A:[34-333] --------------------------------------------------Y-------YSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFT--FSLVNGFPLMTISCFLKKWIFGFAACKVYGFI--GGIFGFMSIMTMAMISIDR---YNVIGRP--MAASKKMSHR-RAFIMIIFVWLWSVLWAIGPIFG-W------------GAYTL----------EGVLCN-----C--SFDYIS-----RDSTTRSNILC--MFI--------LGFFGPILIIFFC--YFNI---VMSVSNHE-------K----E-----------MAAMAKRLNAKELRKAQAGANAEMRLAKIS-----IV----------IVSQF--------LL-----SWSPYAVVALLAQF------G-PLEW-VT--PYAAQ----LP---VMF--------AKA-----SAIHNPMIYSVSHPKFREAISQTFPW---VLTCC-----------------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 86.6318%-155 * C3 *2KS9 NK1R_HUMAN A:[34-324] -----------------------------------------------------------LWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEAS--MAAFN-TVVNFTYAVHNEWYYGLFYCKFHNFF--PIAAVFASIYSMTAVAFDR---YMAIIHP--LQPRL--SAT-ATKVVICVIWVLALLLAFPQGYY-S------------TTET-----------MPSRVV-----C--MIEWPEH---PNKIYEKVYHIC--VTV--------LIYFLPLLVIGYA--YTVV---GITLWASE-------I----PGDSSDRYHEQVS--------------------AKRKVVKMM-----IV----------VVCTF--------AI-----CWLPFHIFFLLPYI------N-PDLYLKKFIQQVYL----AI---MWL--------AMS-----STMYNPIIYCCLNDRFRLGFKHAFRC---CPFIS-----------------------------------------------------------------------------------------------------------------------------------------------
41 Fugue 81.3817%-124 - C3 -1F88 OPSD_BOVIN A:[1-348] ------------MNGTEGPNFYVPFSNKTGVVRSPF-E--------APQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLF--MVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFF--ATLGGEIALWSLVVLAIER---YVVVCKP--MSNFR-FGEN-HAIMGVAFTWVMALACAAPPLVG-W------------SRYIPEGMQCSCGI---------------DYY-----TPHEETNNESFVIY--MFV--------VHFIIPLIVIFFC--YGQLVFTVKEAAASA-------T----T-----------Q--------------------KAEKEVTRMVIIMVIA----------FLICW--------LP-----YAGVAFYIFTHQGS------D-F----G---PIFMT----IP---AFF--------AKT-----SAVYNPVIYIMMNKQFRNCMVTTLCC---GKNPSTTVSKTETSQVAPA---------------------------------------------------------------------------------------------------------------------------------
31 HHSearch 78.1119%-138 - C3 -2LNL - CXCR1_HUMAN A:[39-323] --------------------------------------------------K-------YVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLL--FALT--LPIWAASK-VNGWIFGTFLCKVVSLL--KEVNFYSGILLLACISVDR---YLAIVHA--TRTLT-QKRH-LVKFVCLGCWGLSMNLSLPFFLF-R------------QAYHP----------NNSSPV-----C--YEVLGND----TAKWRMVLRIL--PHT--------FGFIVPLFVMLFC--YGFT---LRTLFKAH-------M----------------G--------------------QKHRAMRVI-----FA----------VVLIF--------LL-----CWLPYNLVLLADTLMRTQVIQESCER-RNNIGRALD----AT---EIL--------GFL-----HSCLNPIIYAFIGQNFRHGFLKILAM---HG--------------------------------------------------------------------------------------------------------------------------------------------------
43 Fugue 77.4014%-124 - C3 -2RH1 ADRB2_HUMAN (first) A:[36-477] ----------------------------------------------DEVWV-------VGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLV--MGLAV-VPFGAAHILMKMWTFGNFWCEFWTSI--DVLCVTASIETLCVIAVDR---YFAITSP--FKYQSLLTKN-KARVIILMVWIVSGLTSFLPIQM-H------------WYRA--------THQEAINCYAEETCC--DFFT------NQAYAIASSIVSFYVPL--------VIMVFVYSRVFQE--AKRQ---LNIFEMLR-------I----D-----------E--------------------GLRLKIYKD-----TE----------GYYTIGIGHLLTKSP-----SLNAAKSELDKAIG------R-N----T---NGVIT----KD---EAE--------KLF-----NQDVDAAVRGILRNAKLKPVYDSLDA---VRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL
32 HHSearch 76.6917%-128 - C3 -1U19 OPSD_BOVIN A:[41-326] ----------------------------------------------------------SMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLF--MVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFF--ATLGGEIALWSLVVLAIER---YVVVCKP--MSNFR-FGEN-HAIMGVAFTWVMALACAAPPLVG-W------------SRYIP----------EGMQCS-----C--GIDYYTP---HEETNNESFVIY--MFV--------VHFIIPLIVIFFC--YGQL---VFTVKEAA-------A----Q-----------QQESATTQK------------AEKEVTRMV-----II----------MVIAF--------LI-----CWLPYAGVAFYIFTH-----Q-G----SDFGPIFMT----IP---AFF--------AKT-----SAVYNPVIYIMMNKQFRNCMVTTLCC---GKNPL-----------------------------------------------------------------------------------------------------------------------------------------------
46 Fugue 75.0717%-171 - C2 -4NWV ? A:[30-384] -----SVAPVAKANALRTTS------SNSILLKGCD-RIVTVVDASTYDAG-------SAIVSIPITPDIAYRLGSTARTFQRIKYRSLKFRVNAQCATTTAGGYVAGFVKDA-ADVLPTGTASIPYLMSNTGSFTQPWWKSTVHNVKIPQKLFYTEAPTRGADAVREYCPGQFHVLVDSKPSQICPVTVDLEWVVELHDA--------------------TFRKE------SDQTAISAIV-----A--DHTLNVYGLPATSNRVGHILIS--PIGQTPKDLTPTRFATFFGFLPDDKFCVRIPTPVDVVLTGD-------N----V-----------Y--------------------QSVEATHIR-----AYLVNGGLGIDFHLAAY--------ND-----TTHTIQPIIPTLWN------V-Y----D---VTGAVTAPFTS---AIYDN------HVW-----THKDKFVPVSFQDEPI---PGTVFDY---LYPRS-----------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 75.0723%-160 - C3 -2RH1 ADRB2_HUMAN (first) A:[41-236] ----------------------------------------------------------VGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLV--MGLAV-VPFGAAHILMKMWTFGNFWCEFWTSI--DVLCVTASIETLCVIAVDR---YFAITSP--FKYQSLLTKN-KARVIILMVWIVSGLTSFLPIQMHW------------YRATH------Q-----EAIN-----C--YA----EETCCDFFTNQAYAIA--SSI--------VSFYVPLVIMVFV--YSRV---FQEAKRQL-------N----I-----------F--------------------EMLRIDEGL-----RL----------KIYKD--------TE-----GYYTIGIGHLLTKS------P-S----L---NAAKS----EL---DKA--------IGR-----NTNGVITKDEAEKLFNQDVDAAVRGI---LRNAK-----------------------------------------------------------------------------------------------------------------------------------------------
40 Fugue 74.1617%-109 - C3 -1U19 OPSD_BOVIN A:[4-349] MNGTEGPNFYVPFSNKTGVV------RSPFEAPQYYLA--------EPWQF-------SMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLF--MVFGG-FTTTLYTSLHGYFVFGPTGCNLEGFF--ATLGGEIALWSLVVLAIER---YVVVCKP--MSNFR-FGEN-HAIMGVAFTWVMALACAAPPLVG-W------------SRYIP------EGMQ----CS-----CGIDYYTP-----HEETNNESFVIY--MFV--------VHFIIPLIVIFFC--YGQL---VFTVKEAAAQQQESAT----T-----------Q--------------------KAEKEVTRM-----VI----------IMVIA--------FLICWLPYAGVAFYIFTHQGS------D-F----G---PIFMT----IP---AFF--------AKT-----SAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA------------------------------------------------------------------------------------------------------------------------------