@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : OR1K1_HUMAN: (2016-01-12 )
MEAANESSEGISFVLLGLTTSPGQQRPLFVLFLLLYVASLLGNGLIVAAIQASPALHAPMYFLLAHLSFADLCFASVTVPKMLANLLAHDHSISLAGCLTQMYFFFALGVTDSCLLAAMAYDCYVAIRHPLPYATRMSRAMCAALVGMAWLVSHVHSLLYILLMARLSFCASHQVPHFFCDHQPLLRLSCSDTHHIQLLIFTEGAAVVVTPFLLILASYGAIAAAVLQLPSASGRLRAVSTCGSHLAVVSLFYGTVIAVYFQATSRREAEWGRVATVMYTVVTPMLNPIIYSLWNRDVQGALRALLIGRRISASDS

Atome Classification :

(20 SA) -------------------------------------------------.........10........20----------------........30........40.--.......50....------------....60........70.......-.80........-90........100....-...110-....-.....120-........130.....-----..140.......150.....----..160-------------..-....---..170.......---------------180.-------......190-----.-------...--.....200..---------------------....--.210----.....----....220.......230--------------------..----...--------..240.------------------......250..-.....260......----------.---270-...-------......--280.......----290...---------....300.......310....--------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------MEAANESSEGISFVLLGLTTS----------------PGQQRPLFVLFLLLYVASLLG--NGLIVAAIQASPA------------LHAPMYFLLAHLSFADLCFASVT-VPKMLANLLAH-DHSISLAGCLTQMYFFF-ALGV---TDSC-LLAAMAY--DCYVAIRHPLPYATRM-----SRAMCAALVGMAWLVSHVHS----LLYI--------------LL-MARL---SFCASHQVPHFF---------------CDHQ-------PLLRLSC-------S-------DTH--HIQLLIFTEG---------------------AAVV--VT------PFLLI----LASYGAIAAAVLQLPSA--------------------SG----RLR--------AVSTCG------------------SHLAVVSLFYG-TVIAVYFQATSRRE----------A---E---WGR-------VATVMY--TVVTPMLNPI----IYSLWN---------RDVQGALRALLIGRRISASDS--------------------------------------------------------------------------------------------------------------------------------------------------------
40 Fugue 91.1016%-131 - C3 -1F88 OPSD_BOVIN A:[1-348] -----------------------------------------------------MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPI--NFLTLYVTVQHKK------------LRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHG-YFVFGPTGCNLEGFFAT-LGGE---IALW-SLVVLAI--ERYVVVCKPMS-NFRF-----GENHAIMGVAFTWVMALACA--------------------------APP---LVGWSRYIPEG-----------------------------MQCSC-------GIDYYTPHEET--NNESFVIYMF---------------------VVHF--II------PLIVI----FFCYGQLVFTVKEAAAS--------------------AT----TQK--------AEKEVT------------------RMVIIMVIAFL-ICWLPYAGVAFYIF----------T---H---QGSDFGPIFMTIPAFF--AKTSAVYNPV----IYIMMN---------KQFRNCMVTTLCCGKNPSTTVSKTETSQVAPA---------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 90.2224%-169 - C3 -2YCW ADRB1_MELGA A:[17-297] --------------------------------------------------------------------------------------------LMALVVLLIVA---G--NVLVIAAIGSTQR------------LQTLTNLFITSLACADLVVGLLV-VP--FGATLVV-RGTWLWGSFLCELWTSLDVLCV---TASIETLCVIAI--DRYLAITSPFRYQSLM-----TRARAKVIICTVWAISALVS----FLPI--------------MM-----------------HWW---------------RDED-------P-QALKC-------Y-------QDP--GCCDFVTNRA---------------------YAIA--SSIISFYIPLLIMIFVALRVYREAKEQIRKIDRA--------------------SK----RKRVMLMREHKALKTLG------------------IIMGVFTLCWL-PFFLVNIVNVFNRDLV--------P---D---WLF-------VAFNWL--GYANSAMNPI----IYCR-S---------PDFRKAFKRLLAF----------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 89.5124%-167 - C3 -2YCZ ADRB1_MELGA A:[17-297] --------------------------------------------------------------------------------------------LMALVVLLIVA---G--NVLVIAAIGSTQR------------LQTLTNLFITSLACADLVVGLLV-VP--FGATLVV-RGTWLWGSFLCELWTSLDVLCV---TASIETLCVIAI--DRYLAITSPFRYQSLM-----TRARAKVIICTVWAISALVS----FLPI--------------MM-----------------HWW---------------RDED-------P-QALKC-------Y-------QDP--GCCDFVTNRA---------------------YAIA--SSIISFYIPLLIMIFVALRVYREAKEQIRKIDRA--------------------SK----RKRVMLMREHKALKTLG------------------IIMGVFTLCWL-PFFLVNIVNVFNRDLV--------P---D---WLF-------VAFNWL--GYANSAMNPI----IYCR-S---------PDFRKAFKRLLAF----------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 88.8824%-166 - C3 -2YCX ADRB1_MELGA A:[17-294] --------------------------------------------------------------------------------------------LMALVVLLIVA---G--NVLVIAAIGSTQR------------LQTLTNLFITSLACADLVVGLLV-VP--FGATLVV-RGTWLWGSFLCELWTSLDVLCV---TASIETLCVIAI--DRYLAITSPFRYQSLM-----TRARAKVIICTVWAISALVS----FLPI--------------MM-----------------HWW---------------RDED-------P-QALKC-------Y-------QDP--GCCDFVTNRA---------------------YAIA--SSIISFYIPLLIMIFVALRVYREAKEQIRKIDRA--------------------SK----RKRVMLMREHKALKTLG------------------IIMGVFTLCWL-PFFLVNIVNVFNRDLV--------P---D---WLF-------VAFNWL--GYANSAMNPI----IYCR-S---------PDFRKAFK---------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 88.4624%-168 - C3 -2VT4 ADRB1_MELGA A:[17-297] --------------------------------------------------------------------------------------------LMALVVLLIVA---G--NVLVIAAIGSTQR------------LQTLTNLFITSLACADLVVGLLV-VP--FGATLVV-RGTWLWGSFLCELWTSLDVLCV---TASIETLCVIAI--DRYLAITSPFRYQSLM-----TRARAKVIICTVWAISALVS----FLPI--------------MM-----------------HWW---------------RDED-------P-QALKC-------Y-------QDP--GCCDFVTNRA---------------------YAIA--SSIISFYIPLLIMIFVALRVYREAKEQIR----------------------------------EHK-----ALKTLG------------------IIMGVFTLCWL-PFFLVNIVNVFNRDLV--------P---D---WLF-------VAFNWL--GYANSAMNPI----IYCR-S---------PDFRKAFKRLLA-----------------------------------------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 87.2517%-152 - C3 -2Z73 OPSD_TODPA A:[32-333] ---------------------------------------------------------------------------------------AVYYSLGIFIGICGIIGCGG--NGIVIYLFTKTKS------------LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLK-KWIFGFAACKVYGFIGG-IFGF---MSIM-TMAMISI--DRYNVIGRPMAASKKM-----SHRRAFIMIIFVWLWSVLWA----IGPI--------------FG-WGAY---TLE----GVLCN---------------CSFD-------YIS-------------------RDS--TTRSNILCMF---------------------ILGF--FG------PILII----FFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANA----EMR--------LAKISI------------------VIVSQFLLSWS-PYAVVALLAQFGPLEWV-------T---P---YAA-------QLPVMF--AKASAIHNPM----IYSVSH---------PKFREAISQTFPWVLTCCQFD--------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 86.5624%-165 - C3 -2YCY ADRB1_MELGA A:[17-297] --------------------------------------------------------------------------------------------LMALVVLLIVA---G--NVLVIAAIGSTQR------------LQTLTNLFITSLACADLVVGLLV-VP--FGATLVV-RGTWLWGSFLCELWTSLDVLCV---TASIETLCVIAI--DRYLAITSPFRYQSLM-----TRARAKVIICTVWAISALVS----FLPI--------------MM-----------------HWW---------------RDED-------P-QALKC-------Y-------QDP--GCCDFVTNRA---------------------YAIA--SSIISFYIPLLIMIFVALRVYREAKEQIR--DRA--------------------SK----RKRVMLMREHKALKTLG------------------IIMGVFTLCWL-PFFLVNIVNVFNRDLV--------P---D---WLF-------VAFNWL--GYANSAMNPI----IYCR-S---------PDFRKAFKRLLAF----------------------------------------------------------------------------------------------------------------------------------------------------------------
41 Fugue 81.8715%-127 - C3 -1U19 OPSD_BOVIN A:[4-349] -------------------------------------MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAE----------------PWQFSMLAAYMFLLIMLGFPI--NFLTLYVTVQHKK------------LRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHG-YFVFGPTGCNLEGFFAT-LGGE---IALW-SLVVLAI--ERYVVVCKPMS-NFRF-----GENHAIMGVAFTWVMALACA----APPL--------------VG-WSRY----------IPEG-----------------------------MQCSCGIDYYTPH-------EET--NNESFVIYMF---------------------VVHF--II------PLIVI----FFCYGQLVFTVKEAAAQ--------------------QQESATTQK--------AEKEVT------------------RMVIIMVIAFL-ICWLPYAGVAFYIF----------T---H---QGSDFGPIFMTIPAFF--AKTSAVYNPV----IYIMMN---------KQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA---------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 81.7415%-155 * C3 *2KS9 NK1R_HUMAN A:[33-325] ------------------------------------------------------------------------------------------VLWAAAYTVIVVTSVVG--NVVVMWIILAHKR------------MRTVTNYFLVNLAFAEASMAAFN-TVVNFTYAVHN-EWYYGLFYCKFHNFFPI-AAVF---ASIY-SMTAVAF--DRYMAIIHPLQPRL-------SATATKVVICVIWVLALLLA----FPQG--------------YY-STTE---T-----MPSRVV---------------CMIE-------WPEHP-----------------NKI--YEKVYHICVT---------------------VLIY--FL------PLLVI----GYAYTVVGITLWASEIPGDSSDRYHEQV---------SA----KRK--------VVKMMI------------------VVVCTFAICWL-PFHIFFLLPYINPD----------LYLKKFIQQVY-------LAIMWL--AMSSTMYNPI----IYCCLN---------DRFRLGFKHAFRCCPFISAGD--------------------------------------------------------------------------------------------------------------------------------------------------------
44 Fugue 81.1017%-139 - C3 -2RH1 ADRB2_HUMAN (first) A:[36-477] ---------------------------------------------------------------------D----------------EVWVVGMGIVMSLIVLAIVFG--NVLVITAIAKFER------------LQTVTNYFITSLACADLVMGLAV-VPFGAAHILMK-MWTFGNFWCEFWTSIDV-LCVT---ASIE-TLCVIAV--DRYFAITSPFKYQSLL-----TKNKARVIILMVWIVSGLTS----FLPI--------------QM-----------HWYRATHQE---------------AINC-------YAEETCC-------D-------FFT--N-QAYAIASS---------------------IVSF--YV------PLVIM----VFVYSRVFQEAKRQLNI--------------------FE----MLR--------IDEGLR------------------LKIYKDTEGYY-TIGIGHLLTKSPSL----------N---A---AKS-------ELDKAIGRNTNGVITKDE----AEKLFN---------QDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL
29 HHSearch 76.6314%-142 - C3 -1U19 OPSD_BOVIN A:[41-329] ------------------------------------------------------------------------------------------SMLAAYMFLLIMLGFPI--NFLTLYVTVQHKK------------LRTPLNYILLNLAVADLFMVFGG-FTTTLYTSLHG-YFVFGPTGCNLEGFFAT-LGGE---IALW-SLVVLAI--ERYVVVCKPMSNFR-F-----GENHAIMGVAFTWVMALACA----APPL--------------VG-WSRY---IPE----GMQCS---------------CGID-------YYTP----------H-------EET--NNESFVIYMF---------------------VVHF--II------PLIVI----FFCYGQLVFTVKEAAAQQQESATTQ------------KA----EKE--------VTRMVI------------------IMVIAFLICWL-PYAGVAFYIFTHQGSDF-------G---P---IFM-------TIPAFF--AKTSAVYNPV----IYIMMN---------KQFRNCMVTTLCCGKNPLGDD--------------------------------------------------------------------------------------------------------------------------------------------------------
45 Fugue 76.6217%-137 - C3 -4XNV P2RY1_HUMAN (first) A:[38-382] -------------------------------------------------SFKCALTKTGF----------------------------QFYYLPAVYILVFIIGFLG--NSVAIWMFVFHMK------------PWSGISVYMFNLALADFLYV-LT-LPALIFYYFNKTDWIFGDAMCKLQRFIFH-VNLY---GSIL-FLTCISA--HRYSGVVYPKSL-GRL-----KKKNAICISVLVWLIVVV-A----ISPI--------------LF-YSGT---GVRKNKT---IT---------------CYDT-------T-------------S-------DEY--LRSYFIYSMC---------------------TTVAMFCV------PLVLI----LGCYGLIVRALI----Y--------------------KM----KKY--------TCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCG-VGKDQFEEVEEPLR----------R---K---SIY-------LVIIVL--TVFAVSYIPFHVMKTMNLRA---------RLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR-----------------------------------------------------------------------------------------------------------------------------
31 HHSearch 76.2420%-137 - C3 -2LNL - CXCR1_HUMAN A:[38-323] ----------------------------------------------------------------------------------------NKYVVIIAYALVFLLSLLG--NSLVMLVILYSRV------------GRSVTDVYLLNLALADLLFAL-T-LPIWAASK-VN-GWIFGTFLCKVVSLLKE-VNFY---SGIL-LLACISV--DRYLAIVHATRTLT-Q-----KRHLVKFVCLGCWGLSMNLS----LPFF--------------LF-RQAY---HP----NNSSPV---------------CYEV-------LGN-----------D-------TAK--WRMVLRILPH---------------------TFGF--IV------PLFVM----LFCYGFTLRTLFKAHM---------------------GQ----KHR--------AMRVIF------------------AVVLIFLLCWL-PYNLVLLADTLMRTQVIQESCERRN---NIG-RAL-------DATEIL--GFLHSCLNPI----IYAFIG---------QNFRHGFLKILAMHG--------------------------------------------------------------------------------------------------------------------------------------------------------------
48 Fugue 74.3618%-139 - C2 -4UOX PAT_ECOLI A:[7-459] SASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTL----------------VDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFC-NSGTESVEAAL-KLAKAYQSPRGKFTFIA-TSGAFHGKSLG-ALSATAK--STFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAA----VILEPIQGEGGVILPPPGYL-TAVR---KLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALG-------G-------GVM--PIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAA--AL------ATINV----LLEQNLPAQAEQKGDML--------------------LD----GFR--------QLAREY------------------PDLVQEARGKG-MLMAIEFVDNEIGY----------N---F---ASE-------MFRQRV--LVAGTLNNAK----TIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA--------------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 73.5522%-174 - C3 -3EML ENLYS_BPT4 A:[22-221] ------------------------------------------------------------------------------------------SVYITVELAIAVLAILG--NVLVCWAVWLNSN------------LQNVTNYFVVSLAAADIAVGVLA-IPFAITIS--T-GFCAACHGCLFIACFVL-VLTQ---SSIF-SLLAIAI--DRYIAIRIPLRYNGLV-----TGTRAKGIIAICWVLSFAIG----LTPM--------------LG-WNNC---GQ-------SQG---------------CGEG-------Q---VAC-------L-------FEDVVPMNYMVYFNF---------------------FACV--LV------PLLLM----LGVYLRIFLAARRQLNI--------------------FE----MLR--------IDEGLR------------------LKIYKDTEGYY-TIGIGHLLTKSPSL----------N---A---AKS-------ELDKAI--GRNTNGVITK----DEAEKL---------FNQDVDAAVRGILRNAKLKPV--------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 72.5320%-168 - C3 -2RH1 ADRB2_HUMAN (first) A:[36-235] ---------------------------------------------------------------------D----------------EVWVVGMGIVMSLIVLAIVFG--NVLVITAIAKFER------------LQTVTNYFITSLACADLVMGLAV-VPFGAAHILMK-MWTFGNFWCEFWTSIDV-LCVT---ASIE-TLCVIAV--DRYFAITSPFKYQSLL-----TKNKARVIILMVWIVSGLTS----FLPI--------------QMHWYRA---THQ-----EAIN---------------CYAE-----------ETC-------C-------DFF--TNQAYAIASS---------------------IVSF--YV------PLVIM----VFVYSRVFQEAKRQLNI--------------------FE----MLR--------IDEGLR------------------LKIYKDTEGYY-TIGIGHLLTKSPSL----------N---A---AKS-------ELDKAI--GRNTNGVITK----DEAEKL---------FNQDVDAAVRGILRNAKLKPV--------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 71.9023%-171 - C3 -3EML ENLYS_BPT4 A:[29-212] -------------------------------------------------------------------------------------------------LAIAVLAILG--NVLVCWAVWLNSN------------LQNVTNYFVVSLAAADIAVGVLA-IP--FAITIST-GFCAACHGCLFIACFVL-VLTQ---SSIF-SLLAIAI--DRYIAIRIPLRYNGLV-----TGTRAKGIIAICWVLSFAIG----LTPM--------------LG-WNNCGQSQGCGEGQVACLF---------------EDVV-------PM---------------------------NYMVYFNF---------------------FACV--LV------PLLLM----LGVYLRIFLAARRQLNI--------------------FE----MLR--------IDEGLR------------------LKIYKDTEGYY-TIGIGHLLTKSPSL----------N---A---AKS-------ELDKAI--GRNTNGVITK----DEAEKL---------FNQDVDAAVRGILRNAKLKPV--------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 71.2523%-166 - C3 -3QAK ENLYS_BPT4 A:[29-212] -------------------------------------------------------------------------------------------------LAIAVLAILG--NVLVCWAVWLNSN------------LQNVTNYFVVSLAAADIAVGVLA-IP--FAITIST-GFCAACHGCLFIACFVL-VLTQ---SSIF-SLLAIAI--DRYIAIRIPLRYNGLV-----TGTRAKGIIAICWVLSFAIG----LTPM--------------LG-WNNCG--QGCGEGQVACLF---------------EDVV-------PM---------------------------NYMVYFNF---------------------FACV--LV------PLLLM----LGVYLRIFLAARRQLNI--------------------FE----MLR--------IDEGLR------------------LKIYKDTEGYY-TIGIGHLLTKSPSL----------N---A---AKS-------ELDKAI--GRNTNGVITK----DEAEKL---------FNQDVDAAVRGILRNAKLKPV--------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 66.5220%-163 - C3 -3RZE ENLYS_BPT4 (first) A:[10-200] -------------------------------------------------------------------------------------------PLVVVLSTICLVTVGL--NLLVLYAVRSERK------------LHTVGNLYIVSLSVADLIVGAVV-MPMNILYLLMS-KWSLGRPLCLFWLSMDY-VAST---ASIF-SVFILCI--DRYRSVQQPLRYLKYR-----TKTRASATILGAWFLSFLWV----IPIL--------------GW--NH-----------RREDK---------------CETD-------FYD-------------------------VTWFKVMTA---------------------IINF--YL------PTLLM----LWFYAKIYKAVRQHCNI--------------------FE----MLR--------IDEGLR------------------LKIYKDTEGYY-TIGIGHLLTKSPSL----------N---A---AKS-------ELDKAI--GRNTNGVITK----DEAEKL---------FNQDVDAAVRGILRNAKLKPV--------------------------------------------------------------------------------------------------------------------------------------------------------
43 Fugue 66.3414%-144 - C4 -3V3T - ? A:[1-306] -------------------------------------------------MKNK--------IVFAPI--------------------GQGGGNIVDTLLGICGDYNA--LFINTSKKDLDSL------------KHAKHTYHIPKERKKAVGYAQTY-YKQIIAQIMEK-FSSCDIVIFVATMAGGA-GSGI---TPPI-LGLAKQMYPNKHFGFVGVLPKATED-----IDEHMNAIACWNDIMRSTNEGKDISIYL--------------LD-NNKR---EK-ESDINKEFA---------------TLFN-------DFMNMSE-------SHAEGVV-DED--EISKLLTMKK---------------------SNVI--LE----------------FDDKEDIQVALAKSLK--------------------ES----IFA--------EYTTNT------------------CEFMGISTTRVVDVEAIKSIVGYPRR----------T---F---KGY-------NSKKNI--VVATGIEPQ-----------------------KTTVQMMNEIIEDKMKQR--------------------------------------------------------------------------------------------------------------------------------------------------------