@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : OR2A4_HUMAN: (2016-01-12 )
MGDNITSIREFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLISLDSRLHAPMYFFLSHLAVVDIAYACNTVPRMLVNLLHPAKPISFAGRMMQTFLFSTFAVTECLLLVVMSYDLYVAICHPLRYLAIMTWRVCITLAVTSWTTGVLLSLIHLVLLLPLPFCRPQKIYHFFCEILAVLKLACADTHINENMVLAGAISGLVGPLSTIVVSYMCILCAILQIQSREVQRKAFRTCFSHLCVIGLVYGTAIIMYVGPRYGNPKEQKKYLLLFHSLFNPMLNPLICSLRNSEVKNTLKRVLGVERAL

Atome Classification :

(20 SA) -------------------------------------.........10.......--..20......---------..30......-..40........-----50........60...-----------...-.--------------.70..-----...-...80........-90.----------.......--100--------------..--.....110----..-.......120.......---130.......140.......150.......160---..--.......170.-...---------------------------------.--------..180.......-------190.-.-.----.-...200....--------...210----.......220.....--------..230---------.--------------------........240.---......250-...--------..-------....260----.---.---.-----.---------...270...-....280-.....----------..290.......300.......310----------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------MGDNITSIRE-FLLLGFP--VGPRIQMLLF---------GLFSLFYVFT-LLGNGTILGLIS-----LDSRLHAPMYFFLSH-----------LAV-V--------------DIAYA-----CNT-VPRMLVNLLHPAK-PIS----------FAGRMMQ--TFL--------------FS--TFAVTE------CL-LLVVMSYDLYVAICHPL---RYLAIMTWRVCITLAVTSWTTGVLLSLIHLV-----LL--LPLPFCRPQKI-YHF---------------------------------F--------CEILAVLKLACA-------DTHI-N-E----N-MVLAGAISGL--------VGPLST----IVVSYMCILCAILQI--------QSR-----------E--------------------VQRKAFRTCFSH---LCVIGLV---YGT--------AI-------IMYVGPR----Y---G---N-----P---------KEQKKYLLL-FHSLFNP-MLNPL----------ICSLRNSEVKNTLKRVLGVERAL------------------------------------------------------
7 PsiBlast_PDB 82.5423%-139 - C4 -4GBR ADRB2_HUMAN A:[13-286] -------------------------------------------------------------------------------SLIVLAI-VFGNVLVITAIA-----KFERLQTVTNYFITS-----------LAC-A--------------DLVMG-----LAV-VPFGAAHIL--TK-TWT----------F-GNFWC--EFW--------------TSIDVLCVTA------SIETLCVIAVDRYFAITSPF---KYQSLLTKNKARVIILMVWIVSGLTS-----------F--LPIQMHWYRAT-HQE---------------------------------A--------INCYA--EETCC-------DFFT-N-Q----A-YAIASSIVSF--------YVPLVI----MVFVY----SRVFQE--------AKR-----------Q--------------------LQ-KIDKFCLKEHKALKTLGII---MGTFTLCWLPFFI-------VNIVHVI----Q---D---N-----L---------IRKEVYILLNWIGYVNS-GFNPL----------I-YCRSPDFRIAFQELLCL----------------------------------------------------------
5 PsiBlast_PDB 80.9623%-136 - C4 -4MBS CCR5_HUMAN (first) A:[34-283] ----------------------------------------------------------------LLP---------PLYSLVFIFG-FVGNMLVILILI-----NYKRLKSMTDIYLLN-----------LAI-S--------------DLFFL-----L-T-VPFW---AHYAAA-QWD----------FGNTMCQLLTGL--------------YF--IGFFSG------IF-FIILLTIDRYLAVVHAV---FALKARTVTFGVVTSVITWVVAVFASLPNII-------------FTRSQKEGLHY---------------------------------T--------CSS----HFPYS-------QYQF-W-K----NFQTLKIVILGL--------VLPLLV----MVICYSGILKTLLRM--------KK---------------------------------------YTC-------TVCGYI---Y-----------------------NPE----D---G---D-----P---------DNGVNPGTD-FKDIPDD-WVCPLCG--------VGKDQFEEVEEEKKRHRDVRLIF------------------------------------------------------
44 Fugue 79.8015%-136 - C4 -1F88 OPSD_BOVIN A:[1-348] -------------------------MNGTEGPNFYVPFSNKTGVVRSPFEAPQYY--LAEPWQFSML---------AAYMFLLIMLGFPINFLTLYVTV-----QHKKLRTPLNYILLN-----------LAV-A--------------DLFMV-----FGG-FTTTLYTSLHGYF-VFG----------PTGCNLE--GFF--------------AT--LGGEIA------LW-SLVVLAIERYVVVCKPM---SNFR-FGENHAIMGVAFTWVMALACAAPPLV------------------GW-SRY---------------------------------I--------PEGM---QCSCGIDYYTPHEETN-N-E----S-FVIYMFVVHF--------IIPLIV----IFFCYGQLVFTVKEAAASATTQ-KAE-----------K--------------------EVTRMVIIMVIA---FLICWLP---YAG--------VA-------FYIFTHQ----G---S---D-----F---------GPIFMTIPA-FFAKTSA-VYNPV----------IYIMMNKQFRNCMVTTLCCGKNPSTTVSKTETSQVAPA---------------------------------------
38 HHSearch 79.1015%-141 - C4 -2Z73 OPSD_TODPA A:[34-332] --------------------------------------------------------------YYSLG---------IFIGICGIIG-CGGNGIVIYLFT-----KTKSLQTPANMFIIN-----------LAF-S--------------DFTFS-----LVNGFPLMTISCFLKKW-IFG----------FAACKVY--GFI--------------GG--IFGFMS------IM-TMAMISIDRYNVIGRPM---AASKKMSHRRAFIMIIFVWLWSVLWAIGPIF-----GW--GAY---TL-EG-VLC---------------------------------N--------CSFDYIS------------RDST-T-R----S-NILCMFILGF--------FGPILI----IFFCYFNIVMSVSNH--------EKE-----------MAAMAKRLNAKELRKAQAGANAEMRLAKISIVI---VSQFLLS---WSP--------YA-------VVALLAQ----FGPLE---W-----V---------TPYAAQLPV-MFAKASA-IHNPM----------IYSVSHPKFREAISQTFPWVLTC------------------------------------------------------
35 HHSearch 78.4015%-139 - C4 -2KS9 NK1R_HUMAN A:[35-324] -----------------------------------------------------------------WA---------AAYTVIVVTS-VVGNVVVMWIIL-----AHKRMRTVTNYFLVN-----------LAF-A--------------EASMA-----AFN-TVVNFTYAVHNEW-YYG----------LFYCKFH--NFF--------------PI--AAVFAS------IY-SMTAVAFDRYMAIIHPL---QPRL--SATATKVVICVIWVLALLLAFPQGY-----Y---STTET----MP-SRV---------------------------------V--------CMIEWPEHP----------NKIY-E-K----V-YHICVTVLIY--------FLPLLV----IGYAYTVVGITLWAS--------EIPGDSSDRYHEQVS--------------------AKRKVVKMMIVV---VCTFAIC---WLP--------FH-------IFFLLPYINP-D---L---YL----KKF-------IQQVYLAIM-WLAMSST-MYNPI----------IYCCLNDRFRLGFKHAFRCCPFI------------------------------------------------------
48 Fugue 77.5015%-119 - C4 -1U19 OPSD_BOVIN A:[4-349] -------------------------MNGTEGPNFYVPFSNKTGVVRS-PFEAPQYYLAEPWQFSMLA---------AYMFLLIMLG-FPINFLTLYVTV-----QHKKLRTPLNYILLN-----------LAV-A--------------DLFMV-----FGG-FTTTLYTSLHGYF-VFG----------PTGCNLE--GFF--------------AT--LGGEIA------LW-SLVVLAIERYVVVCKPM---SNFR-FGENHAIMGVAFTWVMALACAAPPL------------VGWSR-------Y---------------------------------I--------PEGM---QCSCGIDYYTPHEETN-N-E----S-FVIYMFVVHF--------IIPLIV----IFFCYGQLVFTVKEAAAQQQESATTQ-----------K--------------------AEKEVTRMVIIM---VIAFLICWLPYAG--------VA-------FYIFTHQ----G---S---D-----F---------GPIFMTIPA-FFAKTSA-VYNPV----------IYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA---------------------------------
36 HHSearch 76.9317%-126 * C4 *1U19 OPSD_BOVIN A:[42-326] ----------------------------------------------------------------MLA---------AYMFLLIMLG-FPINFLTLYVTV-----QHKKLRTPLNYILLN-----------LAV-A--------------DLFMV-----FGG-FTTTLYTSLHGYF-VFG----------PTGCNLE--GFF--------------AT--LGGEIA------LW-SLVVLAIERYVVVCKPM---SNFRF-GENHAIMGVAFTWVMALACAAPPLV-----GW--SR--Y-IP-EG-MQC---------------------------------S--------CGIDYYTP---H-------EETN-N-E----S-FVIYMFVVHF--------IIPLIV----IFFCYGQLVFTVKEA--------AAQ-----------QQESATTQK------------AEKEVTRMVIIM---VIAFLIC---WLP--------YA-------GVAFYIFTH--Q---GS--D-----F---------GPIFMTIPA-FFAKTSA-VYNPV----------IYIMMNKQFRNCMVTTLCCGKNP------------------------------------------------------
32 HHSearch 71.8616%-117 - C4 -2LNL - CXCR1_HUMAN A:[39-323] --------------------------------------------------------------KYVVI---------IAYALVFLLS-LLGNSLVMLVIL-----YSRVGRSVTDVYLLN-----------LAL-A--------------DLLFA-----L-T-LPIWAASK-VNGW-IFG----------TFLCKVV--SLL--------------KE--VNFYSG------IL-LLACISVDRYLAIVHAT---RTLTQ-KRHLVKFVCLGCWGLSMNLSLPFFL-----FR--QA--Y-HP-NN-SSP---------------------------------V--------CYEVLGND-----------TAKW-R-M----V-LRILPHTFGF--------IVPLFV----MLFCYGFTLRTLFKA--------HM------------G--------------------QKHRAMRVIFAV---VLIFLLC---WLP--------YN-------LVLLADTLMRTQ---VIQESCERRNN---------IGRALDATE-ILGFLHS-CLNPI----------IYAFIGQNFRHGFLKILAMHG--------------------------------------------------------
15 PsiBlast_PDB 69.1623%-162 - C4 -4LDL ADRB2_HUMAN A:[190-402] -------------------------------------------------------------------------------SLIVLAI-VFGNVLVITAIA-----KFERLQTVTNYFITS-----------LAC-A--------------DLVMG-----LAV-VPFGAAHIL--TK-TWT----------F-GNFWC--EFW--------------TSIDVLCVTA------SIETLCVIAVDRYFAITSPF---KYQSLLTKNKARVIILMVWIVSGLTSF---------LP--IQMHWYRATHQ-EAI---------------------------------N--------C----YAEETCC-------DFFT-N-Q----A-YAIASSIVSF--------YVPLVI----MVFVY----SRVFQE--------AKR-----------Q--------------------LQ---KFALKEHKA-LKTLGII---MGT--------FT-------LCWLPFF----I---V---N-----I---------VHVIQDNLI-RKEVYIL-LNWIG----------YVNSGFNPLIYCRSPDFRIAFQE------------------------------------------------------
14 PsiBlast_PDB 68.8623%-163 - C4 -4LDE A:[190-402] -------------------------------------------------------------------------------SLIVLAI-VFGNVLVITAIA-----KFERLQTVTNYFITS-----------LAC-A--------------DLVMG-----LAV-VPFGAAHIL--TK-TWT----------F-GNFWC--EFW--------------TSIDVLCVTA------SIETLCVIAVDRYFAITSPF---KYQSLLTKNKARVIILMVWIVSGLTSF---------LP--IQMHWYRATHQ-EAI---------------------------------N--------C----YAEETCC-------DFFT-N-Q----A-YAIASSIVSF--------YVPLVI----MVFVY----SRVFQE--------AKR-----------Q--------------------LQ---KFALKEHKA-LKTLGII---MGT--------FT-------LCWLPFF----I---V---N-----I---------VHVIQDNLI-RKEVYIL-LNWIG----------YVNSGFNPLIYCRSPDFRIAFQE------------------------------------------------------
16 PsiBlast_PDB 68.8223%-161 - C4 -4LDO A:[190-402] -------------------------------------------------------------------------------SLIVLAI-VFGNVLVITAIA-----KFERLQTVTNYFITS-----------LAC-A--------------DLVMG-----LAV-VPFGAAHIL--TK-TWT----------F-GNFWC--EFW--------------TSIDVLCVTA------SIETLCVIAVDRYFAITSPF---KYQSLLTKNKARVIILMVWIVSGLTSF---------LP--IQMHWYRATHQ-EAI---------------------------------N--------C----YAEETCC-------DFFT-N-Q----A-YAIASSIVSF--------YVPLVI----MVFVY----SRVFQE--------AKR-----------Q--------------------LQ---KFALKEHKA-LKTLGII---MGT--------FT-------LCWLPFF----I---V---N-----I---------VHVIQDNLI-RKEVYIL-LNWIG----------YVNSGFNPLIYCRSPDFRIAFQE------------------------------------------------------
9 PsiBlast_PDB 66.9523%-156 - C4 -4NC3 C562_ECOLX A:[43-247] -------------------------------------------------------------------------------------T-IGGNTLVILAVS-----LEKKLQYATNYFLMS-----------LAV-A--------------DLLVG-----LFV-MPIALLTIMFEAMWPLP----------LVLCPAW--LFL--------------DV--LFSTAS------IW-HLCAISVDRYIAIKKPIQANQYNSRATAFIKITVV---W-------LISIG-----IA--IPVP------I-KGI---------------------------------E--------T-VDNPNNITCV-------LTKE-RFG----D-FMLFGSLAAF--------FTPLAI----MIVTYFLTIHA-LQK--------KAA-----------D--------------------LEDN-WETLNDN---LKVIEKA---DNA--------AQ-------VKDALTK----M---R---A-----K---------DFRHGFDIL-VGQIDDA-LKLAN----------EGKVKEAQAAAEQLKTTRNAYIQ------------------------------------------------------
52 Fugue 65.3719%-176 - C1 -4XGC - ? D:[5-457] DRELVSIRRFLKERLQRDYTTLRGYAKERSNVRLLLQRTAEMGESNS-LLLLG-P--RGSGKTTLIN---------SVLADLLPNK-SFGENTLI--VH-----LDGNLHTDDRVALKS-----------ITVQM--------------QLENAADGKVFGS-FAENLAFLLQCLK-SKSVIFILEEFDLFCAHHNQ--TLL--------------YN--LFDVSQSAQAPICV-LGVTCRLDVIELL--EK---RVKSRFSHRQVFLFPSLRRFEDYVDLCRDLL-----SLPTGNSLLLAAEKI-YNLQNIQSGALYFSRNHFDPGEYGFSPRLRDAWNKQI--------CKVLATQQARST-------LQAL-H-DFDISE-AYLKNFLFRL--------VAHLRPQSPHITAEKMAAVGSQFE---------GDD-----------K--------------------IELLCGLSVLEL---CLIIAIK---HHS--------QIYDRDSFNFEIIYAR----F---S---K-----FAKVSTTMQAVERSIVLKA-FEHLRIAELIMPLTKVQKEFEMHKLALTYSQIHHCMQRYQALPTEVAQWAQSS-----------------------------------------------
18 PsiBlast_PDB 65.0223%-157 - C4 -3SN6 R:[190-381] -------------------------------------------------------------------------------SLIVLAI-VFGNVLVITAIA-----KFERLQTVTNYFITS-----------LAC-A--------------DLVMG-----LAV-VPFGAAHIL--TK-TWT----------F-GNFWC--EFW--------------TSIDVLCVTA------SIETLCVIAVDRYFAITSPF---KYQSLLTKNKARVIILMVWIVSGLTSF---------LP--IQMHWYR---Q-EAI---------------------------------N--------C----YAEETCC-------DFFT-N-Q----A-YAIASSIVSF--------YVPLVI----MVFVY----SRVFQE--------AKR-----------Q--------------------LQKIDKSEGRCL---KEHKALK---TLG--------II-------MGTFTLC----W---L---P-----F---------FIVNIVHVI-QDNLIRK-EVYIL----------LNWIGYVNSGFNPLIYCRSPDFR------------------------------------------------------
50 Fugue 64.4112%-158 - C3 -2OZE ? A:[15-298] -------------------------------------MEKEELKILE-ELRRILS--NKNEAIVILNNYFKGGVGKSKLSTMFAYL-TDKLNLKVLMID-----KDLQATLTKDLAKTFKVELPRVNFYEGLK-N--------------GNLAS-----SIV-HLTDNLDLIPGTF-DLM----------LLPKLTRSWTFE--------------NE--SRLLAT------LL-APLKSDYDLIIIDTVP------------------TPSVYTNNAIVASDYVM-----IP--LQAEEESTNNI-QNY---------------------------------I--------SYLIDLQEQF--------------N-P----G-LDMIGFVPYL--------VDT-------------------------------DS-----------A--------------------TIKSNLEELYKQ---HKEDNLV---FQN--------IIKRSN---KVSTWSK----N---G---I-----T----------EHKGYDKK-VLSMYKN-VFFEM----------LERIIQLENEKE-----------------------------------------------------------------
28 HHSearch 64.4019%-155 - C4 -2RH1 ADRB2_HUMAN (first) A:[41-236] ---------------------------------------------------------------VGMG---------IVMSLIVLAI-VFGNVLVITAIA-----KFERLQTVTNYFITS-----------LAC-A--------------DLVMG-----LAV-VPFGAAHILMKMW-TFG----------NFWCEFW--TSI--------------DV--LCVTAS------IE-TLCVIAVDRYFAITSPF---KYQSLLTKNKARVIILMVWIVSGLTSFLPIQ-----MH--WYR-AT---HQ-EAI---------------------------------N--------CYAE----ETCC-------DFFT-N-Q----A-YAIASSIVSF--------YVPLVI----MVFVYSRVFQEAKRQ--------LNI-----------F--------------------EMLRIDEGLRLK---IYKDTEG---YYT--------IG-------IGHLLTK----S---P---S-----L---------NAAKSELDK-AIGRNTN-GVITK----------DEAEKLFNQDVDAAVRGILRNAK------------------------------------------------------
29 HHSearch 63.3320%-159 - C4 -3EML ENLYS_BPT4 A:[23-222] ----------------------------------------------------------------VYI---------TVELAIAVLA-ILGNVLVCWAVW-----LNSNLQNVTNYFVVS-----------LAA-A--------------DIAVG-----VLA-IPFAITIST--GF-CAA----------CHGCLFI--ACF--------------VL--VLTQSS------IF-SLLAIAIDRYIAIRIPL---RYNGLVTGTRAKGIIAICWVLSFAIGLTPML-----GW--NNCGQ--------SQ---------------------------------G--------CGEGQ---VACL-------FEDVVP-M----NYMVYFNFFACV--------LVPLLL----MLGVYLRIFLAARRQ--------LNI-----------F--------------------EMLRIDEGLRLK---IYKDTEG---YYT--------IG-------IGHLLTK----S---P---S-----L---------NAAKSELDK-AIGRNTN-GVITK----------DEAEKLFNQDVDAAVRGILRNAK------------------------------------------------------
8 PsiBlast_PDB 62.7923%-155 - C4 -4IB4 5HT2B_HUMAN (first) A:[43-247] -------------------------------------------------------------------------------------T-IGGNTLVILAVS-----LEKKLQYATNYFLMS-----------LAV-A--------------DLLVG-----LFV-MPIALLTIMFEAMWPLP----------LVLCPAW--LFL--------------DV--LFSTAS------IW-HLCAISVDRYIAIKKPIQANQYNSRATAFIKITVV---W-------LISIG-----IA--IPVP------I-KGI---------------------------------E--------T---NPNNITCV-------LTKE-RFG----D-FMLFGSLAAF--------FTPLAI----MIVTYFLTIHA-LQK--------KAA-----------D--------------------LEDN-WETLNDN---LKVIEKA---DNA--------AQ-------VKDALTK----M---R---A-----A---------ALDAQKKDF-RHGFDIL-VGQID----------DALKLANEGKVKEAQAAAEQLKT------------------------------------------------------
26 HHSearch 61.2517%-160 - C4 -3UON ACM2_HUMAN (first) A:[25-215] ----------------------------------------------------------------FIV---------LVAGSLSLVT-IIGNILVMVSIK-----VNRHLQTVNNYFLFS-----------LAC-A--------------DLIIG-----VFS-MNLYTLYTVIGYW-PLG----------PVVCDLW--LAL--------------DY--VVSNAS------VM-NLLIISFDRYFCVTKPL---TYPVKRTTKMAGMMIAAAWVLSFILWAPAIL-----FW--QFI--VGVRTV-EDG---------------------------------E--------CYIQF----------------FS-N-A----A-VTFGTAIAAF--------YLPVII----MTVLYWHISRASKSR--------INI-----------F--------------------EMLRIDEGLRLK---IYKDTEG---YYT--------IG-------IGHLLTK----S---P---S-----L---------NAAKSELDK-AIGRNTN-GVITK----------DEAEKLFNQDVDAAVRGILRNAK------------------------------------------------------
49 Fugue 59.9718%-124 - C4 -4QIQ XYLE_ECOLI A:[7-470] --------------SYIFSITLVATLGGLLFGYDTAVISGTVESLNT-VFVAPQN--LSESAANSLL---------GFCVASALIG-CIIGGALGGYCSNRFGRRDSLKIAAVLFFISG-----------VGS-AWPELGFTSINPDNTVPVYL-----AGY-VPEFVIYRIIGGI-GVG----------LASMLSP--MYIAELAPAHIRGKLVSFN--QFAIIF------GQ-LLV-YCVNYFIARSGDA---SWLNTDGWRYM--FASECIPALLFLMLLYTVPESPRWL--MTLATQAVQEI-KHS---------------------------------LDRLLMFGVGVIVIGVMLSIF-------QQFV-G-I----N-VVLYYAPEVFKTLGASTDIALLQT----IIVGVINLTFTVLAI--------MTV-----------DK-------------------FGRKPLQIIGAL---GMAIGMF---SLG--------TA-------FYTQAPG----I---V---A-----L---------LSMLFYVAA-FAMSWGP-VCWVL----------LSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL