@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : OR4M2_HUMAN: (2016-01-13 )
METANYTKVTEFVLTGLSQTPEVQLVLFVIFLSFYLFILPGNILIICTISLDPHLTSPMYFLLANLAFLDIWYSSITAPEMLIDFFVERKIISFDGCIAQLFFLHFAGASEMFLLTVMAFDLYTAICRPLHYATIMNQRLCCILVALSWRGGFIHSIIQVALIVRLPFCGPNELDSYFCDITQVVRIACANTFPEELVMICSSGLISVVCLIALLMSYAFLLALFKKLSGSGENTNRAMSTCYSHITIVVLMFGPSIYIYARPFDSFSLDKVVSVFNTLIFPLRNPIIYTLRNKEVKAAMRKLVTKYILCKEK

Atome Classification :

(20 SA) --------------.........--10.......--.20---------------........--------.30........-----40........50........60-------------........70.--..----...-..80.......-.90....-----...---.100....-------------...110.......120.--..---....130.......140.......150.......160...-..-----.-.170.......180--------........190-----...--.....-----.200.......210.......220.......---230---------.-------------------..---.....240.-----......250.--------......260...--.-------.-----.---.270--------........280.........290....--------...300..------------------.....310.------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------------METANYTKV--TEFVLTGLS--QT----------------PEVQLVLF--------VIFLSFYLFIL-----PGNILIICTISLDPHLTSPMYF-------------LLANLAFLDIW--YS----SIT-APEMLIDFFVE-RKIISFD-----GCI---AQLFFLHF-------------AGASEMFLLTVMAFDLY--TA---ICRPLHYATIMNQRLCCILVALSWRGGFIHSIIQVALIVR-LP-----F-CGPNELDSYFCDI---------TQVVRIACA-------NTF--PEELV-----MICSSGLISVVCLIALLMSYAFLLALFKKLS---GS----------G-------------------EN---TNRAMSTCY-----SHITIVVLMF--------GPSIYIYARPFD--S-------F-----S---LDK---------VVSVFNTLI--FPLRNPIIYTLRNKEV--------KAAMRKLV------------------TKYILCKEK------------
13 PsiBlast_PDB 89.5921%-150 - C4 -3C9L OPSD_BOVIN A:[40-317] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKNDDE-------------
39 Fugue 89.4819%-147 - C4 -1F88 OPSD_BOVIN A:[1-348] -----------------MNGTEG--PNFYVPFSN--KTGVVRSPFEAPQYYLAEPWQFSMLA--------AYMFLLIMLGF-----PINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MV----FGG-FTTTLYTSLHG-YFVFGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSR-YI-----P-EG-----------------------MQCSCGIDYYTPHEET--NNESF-----VIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AS----------A--------------------T---TQKAEKEVT-----RMVIIMVIAF--------LICWLPYAGVAF--Y-------I-----F---THQGSDFGPIFMTIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKNPSTTVSKTETSQVAPA
15 PsiBlast_PDB 88.4821%-152 - C4 -3DQB GNAT1_BOVIN (first) A:[40-317] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKN----------------
16 PsiBlast_PDB 87.8421%-152 - C4 -3PQR OPSD_BOVIN A:[40-317] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKN----------------
14 PsiBlast_PDB 87.7921%-144 - C4 -1F88 OPSD_BOVIN A:[40-317] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---A---------------------------------SATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKNPSTT------------
18 PsiBlast_PDB 87.6221%-151 - C4 -4J4Q GNAT1_BOVIN (first) A:[40-317] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKN----------------
12 PsiBlast_PDB 87.3421%-151 - C4 -3CAP OPSD_BOVIN A:[40-317] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKN----------------
17 PsiBlast_PDB 87.3221%-151 - C4 -3PXO OPSD_BOVIN A:[40-317] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKN----------------
19 PsiBlast_PDB 87.0321%-150 - C4 -4PXF OPSD_BOVIN A:[40-317] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKN----------------
20 PsiBlast_PDB 86.9421%-133 - C4 -3OAX OPSD_BOVIN A:[43-318] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKNPLGD------------
32 HHSearch 85.0916%-151 - C4 -2Z73 OPSD_TODPA A:[32-335] -------------------------------------------------------AVYYSLG--------IFIGICGIIGC-----GGNGIVIYLFTKTKSLQTPANM-------------FIINLAFSDFT--FS----LVNGFPLMTISCFLK-KWIFGFA-----ACK---VYGFIGGI-------------FGFMSIMTMAMISIDRY--NV---IGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGA-YT-----L-----EGVLCNCSF---------DYI-----S-------RDS--TTRSN-----ILCMFILGFFGPILIIFFCYFNIVMSVSNHE---KE----------MAAMAKRLNAKELRKAQAGANA---EMRLAKISI-----VIVSQFLLSW--------SPYAVVALLAQF--G-------PLEWVTP---YAA---------QLPVMFAKA--SAIHNPMIYSVSHPKF--------REAISQTF------------------PWVLTCCQF------------
10 PsiBlast_PDB 84.3921%-136 - C4 -2X72 GNAT1_BOVIN (first) A:[43-318] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LQGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--C-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKN----------------
40 Fugue 82.4719%-126 - C4 -1U19 OPSD_BOVIN A:[4-349] MNGTEGPNFYVPFSNKTGVVRSP--FEAPQYYLA--E-----------------PWQFSMLA--------AYMFLLIMLGF-----PINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MV----FGG-FTTTLYTSLHG-YFVFGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCS-CGID----YYTP------------------H-------EET--NNESF-----VIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQE----------S-------------------AT---TQKAEKEVT-----RMVIIMVIAF--------LICWLPYAGVAF--Y-------I-----F---THQGSDFGPIFMTIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA------------
46 Fugue 80.5018%-156 - C3 -5AHR A:[1-343] -------------SMTCPFYKKIPGTGFTVDAFQYGVV----------------EGCTAYFL--------THFHSDHYA-----------------GLSKHFTFPVYCSE-----------ITGNLLKNKLHVQEQ----YIH-PLPLDTECIVNGVKVVLLDANHCPGAV---MILFYLPNGTVILHTGDFRADPSMERSLLADQKVHMLYLDTT---YCSP-EYTFPSQQEVIRFAINTAFEAVTLNP--HALVVCG-TY-----S-IGKEKVFLAIADVLGSKVGMSQEKYKTLQCL-------NI---PEINS-----LITTDMCSSLVHLLPMMQIN------FKGLQ---SH----------L-------------------KK---CGGKYNQIL-----AFRPTVIPQT--------KGNISIYGIPYS--E-------H-----S---SYL---------EMKRFVQWL--KPQKIIPTVNVGTWKS--------RSTMEKYF------------------REWKLEAGY------------
11 PsiBlast_PDB 79.3921%-132 - C4 -1LN6 OPSD_BOVIN A:[40-315] -------------------------------------------------------------------------LAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MVFGGFTTT-LYTSLHGYFV-----FGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMS----------------NFRFGENHAIMGVAFTWV-MA-----LACAAPPLVGWSRYI---------PEGMQCSCG-------IDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------Q-------------------QESATTQKAEKEVT-----RMVIIMVIAFLICWLPYAGVAFYIFTHQGS--D-------F-----GP--IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVVAT------------------TLCCGKNPL------------
31 HHSearch 77.7815%-142 * C4 *2KS9 NK1R_HUMAN A:[33-325] ----------------------------------------------------------VLWA--------AAYTVIVVTSV-----VGNVVVMWIILAHKRMRTVTNY-------------FLVNLAFAEAS--MA----AFN-TVVNFTYAVHN-EWYYGLF-----YCK---FHNFFPIA-------------AVFASIYSMTAVAFDRY--MA---IIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTT-ET-----------MPSRVVCMI---------EWPE----H-------PNKI-YEKVY-----HICVTVLIYFLPLLVIGYAYTVVGITLWASE---IPGDSSDRYHEQV-------------------SA---KRKVVKMMI-----VVVCTFAICW--------LPFHIFFLLPYI--N-------PDLYLKKFIQQVY---------LAIMWLAMS--STMYNPIIYCCLNDRF--------RLGFKHAF------------------RCCPFISAG------------
29 HHSearch 77.3917%-134 - C4 -1U19 OPSD_BOVIN A:[40-329] ---------------------------------------------------------FSMLA--------AYMFLLIMLGF-----PINFLTLYVTVQHKKLRTPLNY-------------ILLNLAVADLF--MV----FGG-FTTTLYTSLHG-YFVFGPT-----GCN---LEGFFATL-------------GGEIALWSLVVLAIERY--VV---VCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSR-YI-----P-----EGMQCSCGI---------DYYT---PH-------EET--NNESF-----VIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA---AQ----------QQESATTQ------------KA---EKEVTRMVI-----IMVIAFLICW--------LPYAGVAFYIFTHQGS------DFG---P---IFM---------TIPAFFAKT--SAVYNPVIYIMMNKQF--------RNCMVTTL------------------CCGKNPLGD------------
27 HHSearch 76.6719%-125 - C4 -2LNL - CXCR1_HUMAN A:[36-323] ------------------------------------------------------TLNKYVVI--------IAYALVFLLSL-----LGNSLVMLVILYSRVGRSVTDV-------------YLLNLALADLL--FA----L-T-LPIWAASK-VN-GWIFGTF-----LCK---VVSLLKEV-------------NFYSGILLLACISVDRY--LA---IVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQA-YH-----P-----NNSSPVCYE---------VLGN----D-------TAK--WRMVL-----RILPHTFGFIVPLFVMLFCYGFTLRTLFKAH---------------M-------------------GQ---KHRAMRVIF-----AVVLIFLLCW--------LPYNLVLLADTL--MRTQVIQESCERRNNIG-RAL---------DATEILGFL--HSCLNPIIYAFIGQNF--------RHGFLKIL------------------AMHG-----------------
45 Fugue 74.2815%-150 - C1 -1A6Q PPM1A_HUMAN A:[2-368] ------GAFLDKPKMEKHNAQGQ--GNGLRYGLS--SMQGWRVEM---------EDAHTAVIGLPSGLESWSFFAVYDGHA-----GSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEID--EH----MRV-MSEK--KHGAD-RSGSTAV-----GVLISPQHTYFINC--------------GDSRGLLCRNRKVHFF--TQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCV-HG-----K-GPTEQLVSPEPEV---------HDIER-----------SEE--DDQFI-----ILACDGIWDVMGNEEL---CDFVRSRLEVTD---DL----------E-------------------KV---CNEVVDTCLYKGSRDNMSVILICFPN------APKVSPEAVKKE--A-------E-----L---DKY---------LECRVEEIIKGVPDLVHVMRTLASENIPSLPPGGELASKRNVI------------------EAVYNRLNPY-----------
25 HHSearch 65.5120%-168 - C4 -3EML ENLYS_BPT4 A:[21-219] ---------------------------------------------------------SSVYI--------TVELAIAVLAI-----LGNVLVCWAVWLNSNLQNVTNY-------------FVVSLAAADIA--VG----VLA-IPFAITIST---GFCAACH-----GCL---FIACFVLV-------------LTQSSIFSLLAIAIDRY--IA---IRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNN-CG-----Q--------SQGCGE---------GQ---VACL-------FEDVVPMNYM-----VYFNFFACVLVPLLLMLGVYLRIFLAARRQL---NI----------F-------------------EM---LRIDEGLRL-----KIYKDTEGYY--------TIGIGHLLTKSP--S-------L-----N---AAK---------SELDKAIGR--NTNGVITKDEAEKLFN--------QDVDAAVR------------------GILRNAKLK------------