@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SSR5_HUMAN: (2016-01-14 )
MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVFADVQEGGTCNASWPEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGCVRRRSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYANSCANPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAANGLMQTSKL

Atome Classification :

(20 SA) ------.........10........20........30........40....--....50........60........70........80........90-.......--.100.-.-......110.......120.......130.......140.......150-.........160......-.170....-.-..--180-.------.---.--.----.....---190........200.......210.......220-........230....-------------------------------------------------------------------------------------------------------------------------------------------------------------.-----------------------------------------..240........250.......260.......270.....-------..280.--------......290.......--300.......310.......320.......330.......340.......350.......360..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------MEPLFPASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPV--LYLLVCAAGLGGNTLVIYVVLRFAKMKTVTNIYILNLAVADVLYML-GLPFLAT--QNA-A-S-FWPFGPVLCRLVMTLDGVNQFTSVFCLTVMSVDRYLAVVHPLSSARW---RRPRVAKLASAAAWVLSL-CMSLPLLV-F-AD--V---Q------E---G--G----TCNAS---W-PEPVGLWGAVFIIYTAVLGFFAPLLVICLCY--LLIVVKVRAAGVRVG-------------------------------------------------------------------------------------------------------------------------------------------------------------C-----------------------------------------VRR-RSERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALP-------QEPASA--------GLYFFVVILSYANSCA--NPVLYGFLSDNFRQSFQKVLCLRKGSGAKDADATEPRPDRIRQQQEATPPAHRAAANGLMQTSKL
3 PsiBlast_PDB 85.0040%-147 - C3 -4N6H C562_ECOLX (first) A:[113-414] ---------------------SPGARSA------------SSLALAIAITA--LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATS-TLPFQSA--KYL-M-E-TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDF---RTPAKAKLINICIWVLAS-GVGVPIMV-M-AV--TRP-R------D---G--AV---VCMLQ---F-PSPSWYWDTVTKICVFLFAFVVPILIITVCY--GLMLLRLRSVRLLSG-------------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVV--------AALHLCIALGYANSSL--NPVLYAFLDENFKRCFRQ-LC-RKPCG--------------------------------------
22 PsiBlast_CBE 84.1540%-145 - C3 -4RWD C562_ECOLX (first) B:[108-405] -------------------------------QKYLGARSASSLALAIAITA--LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATS-TLPFQSA--KYL-M-E-TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDF---RTPAKAKLINICIWVLAS-GVGVPIMV-M-AV--TRP-R------D---G--AV---VCMLQ---F-PSPSWYWDTVTKICVFLFAFVVPILIITVCY--GLMLLRLRSVRLLSG-------------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVV--------AALHLCIALGYANSSL--NPVLYAFLDENFKRCFRQ-L---------------------------------------------
5 PsiBlast_PDB 84.1340%-146 - C3 -4RWD C562_ECOLX (first) A:[108-406] -------------------------------QKYLGARSASSLALAIAITA--LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATS-TLPFQSA--KYL-M-E-TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDF---RTPAKAKLINICIWVLAS-GVGVPIMV-M-AV--TRP-R------D---G--AV---VCMLQ---F-PSPSWYWDTVTKICVFLFAFVVPILIITVCY--GLMLLRLRSVRLLSG-------------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVV--------AALHLCIALGYANSSL--NPVLYAFLDENFKRCFRQ-LC--------------------------------------------
4 PsiBlast_PDB 84.0040%-152 - C3 -4RWA C562_ECOLX (first) A:[108-406] -------------------------------QKYLGARSASSLALAIAITA--LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATS-TLPFQSA--KYL-M-E-TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDF---RTPAKAKLINICIWVLAS-GVGVPIMV-M-AV--TRP-R------D---G--AV---VCMLQ---F-PSPSWYWDTVTKICVFLFAFVVPILIITVCY--GLMLL---------G-------------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVV--------AALHLCIALGYANSSL--NPVLYAFLDENFKRCFRQ-LC--------------------------------------------
23 PsiBlast_CBE 83.8940%-151 - C3 -4RWA C562_ECOLX (first) B:[108-403] -------------------------------QKYLGARSASSLALAIAITA--LYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATS-TLPFQSA--KYL-M-E-TWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDF---RTPAKAKLINICIWVLAS-GVGVPIMV-M-AV--TRP-R------D---G--AV---VCMLQ---F-PSPSWYWDTVTKICVFLFAFVVPILIITVCY--GLMLLR--------G-------------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------KEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDR------RDPLVV--------AALHLCIALGYANSSL--NPVLYAFLDENFKRCFR------------------------------------------------
44 HHSearch 82.3233%-143 - C3 -3PBL DRD3_HUMAN (first) A:[41-472] ------------------------------------------------YAL--SYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVY--LEVTG-G-VWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAF-AVSCPLLF-G-FN--T---TG-----D---P--T----VCSIS---N-P--------DFVIYSSVVSFYLPFGVTVLVY--ARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY-----------------------------------------GVP-LREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTC---------HVSP--------ELYSATTWLGYVNSAL--NPVIYTTFNIEFRKAFLKILSC-------------------------------------------
34 HHSearch 82.1528%-139 - C3 -2RH1 ADRB2_HUMAN (first) A:[41-477] ----------------------------------------------VGMGI--VMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAA--HIL-M-K-MWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSL---LTKNKARVIILMVWIVSG-LTSFLPIQ-MHWYR-A---THQ----E---A--I----NCYAE---E-TCCDFFTNQAYAIASSIVSFYVPLVIMVFVY--SRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA--Y-----------------------------------------KFC-LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQD----------NLIRK--------EVYILLNWIGYVNSGF--NPLIYC-RSPDFRIAFQELLCL-------------------------------------------
21 PsiBlast_CBE 81.8143%-149 - C3 -4EA3 OPRX_HUMAN B:[131-407] -----------------------------------------------------LYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLL-TLPFQGT--DIL-L-G-FWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDV---RTSSKAQAVNVAIWALAS-VVGVPVAI-M-GS--A--------------E--I----ECLVE---I-PTPQDYWGPVFAICIFLFSFIVPVLVISVCY--SLMIRRL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKDRNLRRITRLVLVVVAVFVGCWTP---VQVFVLAQGLG-------VQPSSETAV-----AILRFCTALGYVNSCL--NPILYAFLDENFKACFRKF----------------------------------------------
52 Fugue 81.4529%-153 - C3 -4XNV P2RY1_HUMAN (first) A:[38-382] ----------------SFKC-----------------ALTKTGFQFYYLPA--VYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVL-TLPALIF--YYF-NKT-DWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRL---KKKNAICISVLVWLIVVV-AIS-PILF-Y-SG--T---G------V---R--KNKTITCYDT---T-SDEYLRSYFIYSMCTTVAMFCVPLVLILGCY--GLIVRALIYKMKKYT-------------------------------------------------------------------------------------------------------------------------------------------------------------CTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEE-PLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLD-------FQTPAMCAFNDRVYATYQVTRGLASLNSCV--NPILYFLAGDTFRRR--------------------------------------------------
1 PsiBlast_PDB 80.6543%-150 - C3 -4EA3 C562_ECOLX (first) A:[131-405] -----------------------------------------------------LYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLL-TLPFQGT--DIL-L-G-FWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP----------TSSKAQAVNVAIWALAS-VVGVPVAI-M-GS--A---QVED---E---E--I----ECLVE---I-PTPQDYWGPVFAICIFLFSFIVPVLVISVCY--SLMIRRLRGVRLLSG-------------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------REKDRNLRRITRLVLVVVAVFVGCWTP---VQVFVLAQGLG-------VQPSSETAV-----AILRFCTALGYVNSCL--NPILYAFLDENFKACFR------------------------------------------------
33 HHSearch 80.1131%-145 - C3 -3ODU CXCR4_HUMAN (first) A:[46-496] -------------------------------------------FNKIFLPT--IYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVI-TLPFWAV--DAV---A-NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRP---RKLLAEKVVYVGVWIPAL-LLTIPDFI-F-AN--V---S------EADDR--Y----ICDRF---Y-PNDL--WVVVFQFQHIMVGLILPGIVILSCY--CIIISKLSHSGSNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYG-----------------------------------------SKG-HQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVH--------KWISITEALAFFHCCL--NPILYAFLGAKFKTSAQHALTSGRPLEVLFQ----------------------------------
2 PsiBlast_PDB 79.4640%-163 - C3 -5C1M ? A:[17-296] ---------------------------------------------AITIMA--LYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATS-TLPFQSV--NYL-M-G-TWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDF---RTPRNAKIVNVCNWILSS-AIGLPVMF-M-AT--TKYRQ------G---S--I----DCTLT---F-SHPTWYWENLLKICVFIFAFIMPVLIITVCY--GLMILRLKSVRMLSG-------------------------------------------------------------------------------------------------------------------------------------------------------------S-----------------------------------------KEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIP-------ETTFQT--------VSWHFCIALGYTNSCL--NPVLYAFLDENFKRCF-------------------------------------------------
35 HHSearch 79.3328%-146 - C3 -3RZE ENLYS_BPT4 (first) A:[13-443] --------------------------------------------------V--VLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNIL--YLL-M-S-KWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKY---RTKTRASATILGAWFLSF-LWVIPILG-W-NH--------------RR-E--D----KCETD---F-YDV-----TWFKVMTAIINFYLPTLLMLWFY--AKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA--Y-----------------------------------------LHM-NRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKN---------C-CNE--------HLHMFTIWLGYINSTL--NPLIYPLCNENFKKTFKRILHI-------------------------------------------
51 Fugue 76.5225%-116 - C3 -1F88 OPSD_BOVIN A:[1-348] -----------MNGTEGPNFYVPFSNKTGVVRSPFEAPQYYLAEPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVF-GGFTTTL--YTS-L-HGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF---G-ENHAIMGVAFTWVMAL-ACAAPPLVGW-SR--Y---I------P---E--GMQC-SCGID---YYTPHEETNNESFVIYMFVVHFIIPLIVIFFCY--GQLVFTVKEAAASAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQ-KAEKEVTRMVIIMVIAFLICWLPY--AGVAFYIFTHQ-------GSDFGP--------IFMTIPAFFAKTSAVY--NPVIYIMMNKQFRNCMVTTLCCGK----------NPSTTVSKTETSQVAPA--------------
32 HHSearch 74.4627%-147 - C3 -3UON ACM2_HUMAN (first) A:[24-457] ----------------------------------------------VFIVL--VAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTL--YTV-I-G-YWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVK---RTTKMAGMMIAAAWVLSF-ILWAPAIL-F-WQ--F---IVGVRTVE---D--G----ECYIQ---F-FS-----NAAVTFGTAIAAFYLPVIIMTVLY--WHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDA--Y-----------------------------------------PPP-SREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP----------CIPN--------TVWTIGYWLCYINSTI--NPACYALCNATFKKTFKHLLM--------------------------------------------
49 Fugue 74.2126% -93 - C3 -1U19 OPSD_BOVIN A:[4-349] MNGTEGPNFYVPFSNKTGVVRSP--------FEAPQYYLAEPWQFSMLAAY--MFLLI-MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLY--TSL-H-G-YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF---G-ENHAIMGVAFTWVMAL-ACAAPPLV-G-WSRYI---P------E---GMQC----SCGID---YYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES-------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTQ-KAEKEVTRMVIIMVIAFLICWLPY--AGVAFYIFTHQ-------GSDFGP--------IFMTIPAFFAKTSAVY--NPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVS----KTETSQVAPA--------------
17 PsiBlast_PDB 73.4928%-157 - C- -3C9L OPSD_BOVIN A:[38-332] ---------------------------------------------SMLAAY--MFLLI-MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVF-G-GFTTTLYTSL-H-G-YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF---GENH-AIMGVAFTWVMALACAAPPLVG-W-SRY-I---P------E---G--M----QCSCGIDYY-TPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES-------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTQ-KAEKEVTRMVIIMVIAFLICWLPYAGVAF----YIFT-------HQGSDF--------GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---DDE----------------------------------
19 PsiBlast_PDB 73.4628%-136 - C3 -3DQB GNAT1_BOVIN (first) A:[38-326] ---------------------------------------------SMLAAY--MFLLI-MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVF-G-GFTTTLYTSL-H-G-YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF---GENH-AIMGVAFTWVMALACAAPPLVG-W-SRY-I---P------E---G--M----QCSCGIDYY-TPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES-------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTQ-KAEKEVTRMVIIMVIAFLICWLPYAGVAF----YIFT-------HQGSDF--------GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------------------------------------
18 PsiBlast_PDB 73.2228%-123 - C3 -1F88 OPSD_BOVIN A:[38-344] ---------------------------------------------SMLAAY--MFLLI-MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVF-G-GFTTTLYTSL-H-G-YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF---GENH-AIMGVAFTWVMALACAAPPLVG-W-SRY-I---P------E---G--M----QCSCGIDYY-TPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAA----S-------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTQ-KAEKEVTRMVIIMVIAFLICWLPYAGVAF----YIFT-------HQGSDF--------GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNP------STTVSKTETSQVAPA------------------
20 PsiBlast_PDB 72.9728%-142 - C3 -3PQR OPSD_BOVIN A:[38-326] ---------------------------------------------SMLAAY--MFLLI-MLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVF-G-GFTTTLYTSL-H-G-YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF---GENH-AIMGVAFTWVMALACAAPPLVG-W-SRY-I---P------E---G--M----QCSCGIDYY-TPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQES-------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------TTQ-KAEKEVTRMVIIMVIAFLICWLPYAGVAF----YIFT-------HQGSDF--------GPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN----------------------------------------