@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : LIMK1_HUMAN: (2015-06-17 )
MRLTLLCCTWREERMGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWARYGESCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYCGHCYYQTVVTPVIEQILPDSPGSHLPHTVTLVSIPASSHGKRGLSVSIDPPHGPPGCGTEHSHTVRVQGVDPGCMSPDVKNSIHVGDRILEINGTPIRNVPLDEIDLLIQETSRLLQLTLEHDPHDTLGHGLGPETSPLSSPAYTPSGEAGSSARQKPVLRSCSIDRSPGAGSLGSPASQRKDLGRSESLRVVCRPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHLPLGPQLEQLDRGFWETYRRGESGLPAHPEVPD

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340------------...-.....350.----.....-----.360.--..--.....370--.--.......380.......390.......400.......410.......420.......---430-.......440.......450.......460.......470.......480.......490......-.500.......510.......520.......530.......540.--...----...550.......560.-......-------570------...-......580.......590.......600.......610.-......620.......630.......640.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MRLTLLCCTWREERMGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYWARYGESCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEHSKLYCGHCYYQTVVTPVIEQILPDSPGSHLPHTVTLVSIPASSHGKRGLSVSIDPPHGPPGCGTEHSHTVRVQGVDPGCMSPDVKNSIHVGDRILEINGTPIRNVPLDEIDLLIQETSRLLQLTLEHDPHDTLGHGLGPETSPLSSPAYTPSGEAGSSARQKPVLRSCSIDRSPGAGSLGSPASQRKDLGRSESLRVVCRPHRIFRPSDLIH-------------GEV-LGKGCFGQA----IKVTH-----RE-TG--EV--MVMKELI---R--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD---SQY-PWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSL-KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII--GRV----NADPDYLPRTMDFGLNV-RGFLDR-------Y--------CPP-NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG-HLPLGPQLEQLDRGFWETYRRGESGLPAHPEVPD
1 PsiBlast_PDB 93.86100%-132 - C3 -3S95 LIMK1_HUMAN A:[3-310] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHRIFRPSDLIH-------------GEV-LGKGCFGQA----IKVTH-----RE-TG--EV--MVMKELI---R--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD---SQY-PWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV---------------------YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII--GRV----NADPDYLPRTMDFGLNV-RGFLDR-------Y--------CPP-NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG-HLPLGPQLEQLDRGFWETYRRGES----------
111 HHSearch 93.52100%-132 - C3 -3S95 LIMK1_HUMAN A:[3-309] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHRIFRPSDLIH-------------GEV-LGKGCFGQA----IKVTH-----RE-TG--EV--MVMKELI---R--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD---SQY-PWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV---------------------YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII--GRV----NADPDYLPRTMDFGLNV-RGFLDR-------Y--------CPP-NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG-HLPLGPQLEQLDRGFWETYRRGES----------
21 PsiBlast_CBE 92.09100%-129 - C3 -3S95 B:[3-310] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHRIFRPSDLIH-------------GEV-LGKGCFGQA----IKVTH-----RE-TG--EV--MVMKELI---R--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMD---SQY-PWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV---------------------YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII--GRV----NADPDYLPRTMDFGLNV-RGFLDR-------Y--------CPP-NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG-HLPLGPQLEQLDRGFWETYRRGES----------
2 PsiBlast_PDB 85.9068%-137 - C3 -4TPT ? A:[1-294] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLIH-------------GEV-LGKGFFGQA----IKVTH-----KA-TG--KV--MVMKELI---R--CDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMD---P-F-PWQQKVRFAKGIASGMAYLHSMCIIHRDLNSHNCLIKLDKTVVVADFGLSRLIV------------------KKRYTVVGNPYWMAPEMLNGKSYDETVDIFSFGIVLCEII--GQV----YADPDCLPRTLDFGLNV-KLFWEK-------F--------VPT-DCPPAFFPLAAICCRLEPESRPAFSKLEDSFEALSLYLGELGIPLPAELEELDHTVSMQYG--------------
22 PsiBlast_CBE 84.9368%-142 - C3 -4TPT ? B:[1-294] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLIH-------------GEV-LGKGFFGQA----IKVTH-----KA-TG--KV--MVMKELI---R--CDEETQKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLRSMD---P-F-PWQQKVRFAKGIASGMAYLHSMCIIHRDLNSHNCLIKLDKTVVVADFGLSRLIV---------------------YTVVGNPYWMAPEMLNGKSYDETVDIFSFGIVLCEII--GQV----YADPDCLPRTLDFGLNV-KLFWEK-------F--------VPT-DCPPAFFPLAAICCRLEPESRPAFSKLEDSFEALSLYLGELGIPLPAELEELDHTVSMQYGL-------------
99 PsiBlast_CBE 59.0833%-114 - C3 -4LUD HCK_HUMAN B:[196-440] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGAGQFGEV----WMATY-----NK-HT--KV--AV--KTM---K--PG--SVEAFLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEG--SKQ-PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI------------P-IK--------------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRM-PR---------------------PE-NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES-QYEE------------------------------
112 HHSearch 58.1929%-117 - C3 -4AOJ NTRK1_HUMAN A:[36-319] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHIK-RRDIVL-------------KWE-LGEGAFGKV----FLAECHNLLP----K--ML--VAVKALK---E--ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDPGPL-GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG-----------------------------TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ-------P-W------YQLSN-TEAIDCITQGRELE--------RPR-ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP------------------------------------
12 PsiBlast_PDB 57.4530%-111 - C3 -4G2F A:[39-295] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KV-VGAGEFGEVCSGRLKLPS-----KK-EI--SV--AIKTLKV---G--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQF-TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL----------------PIR-----------WTSPEAIAYRKFTSASDVWSYGIVLWEVM--S-Y----GERPYWEMSNQDVIKAVDEGY--R-------L--------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS-LKIITPSNLLL-----------------------
8 PsiBlast_PDB 57.1129%-111 - C3 -2QO9 A:[34-307] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVHEFAKELDATNISIDKV-VGAGEFGEVCSGRLKLPS-----KK-EI--SV--AIKTLKV---G--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQF-TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL--------------KIPIR-----------WTSPEAIAYRKFTSASDVWSYGIVLWEVM--S-Y----GERPYWEMSNQDVIKAVDEGY--R-------L--------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS-LKIITNLLLD------------------------
5 PsiBlast_PDB 56.8929%-113 - C3 -2QOD - EPHA3_HUMAN A:[595-881] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYVDP---------VHEFAKELDATNISIDKV-VGAGEFGEVCSGRLKLPS-----KK-EI--SV--AIKTLKV---G--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQF-TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF----------------------PIR-----------WTSPEAIAYRKFTSASDVWSYGIVLWEVM--S-Y----GERPYWEMSNQDVIKAVDEGY--R-------L--------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL-----------------------------------------
28 PsiBlast_CBE 56.7334%-110 - C3 -4DGG SRC_CHICK B:[16-270] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRESLR-------------LEVKLGQGCFGEV----WMGTW-----NG-TT--RV--AI--KTL---K--P------AFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL------------FP-IK--------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYP----------GMVN-REVLDQ-------VERGYRMP-CPP-ECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP-QYQPGENL--------------------------
100 PsiBlast_CBE 56.7033%-114 - C3 -4LUD HCK_HUMAN A:[196-440] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGAGQFGEV----WMATY-----NK-HT--KV--AV--KTM---K--P---SVEAFLAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEG--SKQ-PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI------------P-IK--------------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-----LERGYRM-PR---------------------PE-NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES-QYEEIP----------------------------
9 PsiBlast_PDB 56.6529%-108 - C3 -3FXX A:[30-305] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQTVHEFAKELDATNISIDKV-VGAGEFGEVCSGRLKLPS-----KK-EI--SV--AIKTLKV---G--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQF-TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD---------G-KIPIR-----------WTSPEAIAYRKFTSASDVWSYGIVLWEVM--S-Y----GERPYWEMSNQDVIKAVDEGY--R-------L--------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS-LKIITAARPSNLLLD-------------------
118 HHSearch 56.5629%-116 - C3 -4HZS - ACK1_HUMAN A:[123-388] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKDLRL-------------LEK-LGDGSFGVV----RRGEW-----DAPSG--KTVSVAVKCLKPDVL--SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQ---GHF-LLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP-------------------------VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE--------PW------IGLNG-SQILHK-------IDKEGERLPRPE-DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMR-ALQDFEEPDKLHIQMNDVITVIEGRAENYWWRGQ
18 PsiBlast_PDB 56.1629%-108 - C3 -2QO7 A:[21-307] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TYVDPHT-------VHEFAKELDATNISIDKV-VGAGEFGEVCSGRLKLPS-----KK-EI--SV--AIKTLKV---G--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQF-TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFG---------------------PIR-----------WTSPEAIAYRKFTSASDVWSYGIVLWEVM--S-Y----GERPYWEMSNQDVIKAVDEGY--R-------L--------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS-LKIITSPSNLLLD---------------------
3 PsiBlast_PDB 55.9529%-112 - C3 -2QOO - EPHA3_HUMAN A:[595-881] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TFVDP---------VHEFAKELDATNISIDKV-VGAGEFGEVCSGRLKLPS-----KK-EI--SV--AIKTLKV---G--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQF-TVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDF----------------------PIR-----------WTSPEAIAYRKFTSASDVWSYGIVLWEVM--S-Y----GERPYWEMSNQDVIKAVDEGY--R-------L--------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL-----------------------------------------
97 PsiBlast_CBE 55.8833%-116 - C3 -4LUE HCK_HUMAN B:[196-440] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGAGQFGEV----WMATY-----NK-HT--KV--AV--KTM---K--P--------LAEANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEG--SKQ-PLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI------------P-IK--------------WTAPEAINF---TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRM-PR---------------------PE-NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATES-QYEEI-----------------------------
4 PsiBlast_PDB 55.8829%-111 - C3 -2QOI A:[21-307] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TFVDP---------VHEFAKELDATNISIDKV-VGAGEFGEVCSGRLKLPS-----KK-EI--SV--AIKTLKV---G--YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD---AQF-TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF----------------------PIR-----------WTSPEAIAYRKFTSASDVWSYGIVLWEVM--S-Y----GERPYWEMSNQDVIKAVDEGY--R-------L--------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGS-LKIITSNLLLD-----------------------
20 PsiBlast_PDB 55.6131%-105 - C3 -3ZFX - EPHB1_HUMAN A:[25-283] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EV-IGA--FGEV----YKGRL-----KL-PGKREI--YVAIKTL---KAG-SEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQND---GQF-TVIQLVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQ------------GKIPVR-----------WTAPEAIAYRKFTSASDVWSYGIVMWEVM--SF------GERPYWDMSNQDVINA-IEQDYR-------L--------PPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRNPAS-LKTVAT----------------------------
44 PsiBlast_CBE 55.3134%-106 - C3 -3EN4 SRC_CHICK B:[16-270] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRESLR-------------LEVKLGQGCFGEV----WMGTW-----NG-TT--RV--AI--KTL---K--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARL----------AKFP-IK--------------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRV----PYP----------GMVN-REVLDQ-------VERGYRMP-CPP-ECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEP-QYQPGENL--------------------------