@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : VRK1_HUMAN: (2015-10-22 )
MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPEKNKPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKKEIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK

Atome Classification :

(7 SA) .........10........20........30........40........50........60........70.....--...80........90........100.......110.......120.......130.......140.......150.......160.......170.......180......-.190.......200.......210.........220.......230.......240.......250.......260.......270.......280..-.....290---.----.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MPRVKAAQAGRQSSAKRHLAEQFAVGEIITDMAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSD--NGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEGVH--KEYKEDPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIAS-LMDKCFP----E----KNKPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDLSVVENGGLKAKTITKKRKKEIEESKEPGVEDTEWSNTQTEEAIQTRSRTRKRVQK
37 HHSearch 88.2897% -92 - C1 -3OP5 VRK1_HUMAN A:[21-341] --------------------EQFAVGEIITDMAAAAWKVGLPIGQG-FGCIYLADMNSSESVGSDAPCVVKVEPSD--NGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEGVH--KAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIAS-LMDKCFP----A----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL-------------------------------------------------------
4 PsiBlast_PDB 88.0996% -92 - C1 -3OP5 VRK1_HUMAN A:[21-341] --------------------EQFAVGEIITDMAAAAWKVGLPIGQG-FGCIYLADMNSSESVGSDAPCVVKVEPSD--NGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEGVH--KAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIAS-LMDKCFP----A----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL-------------------------------------------------------
23 PsiBlast_CBE 87.2596% -91 - C1 -3OP5 VRK1_HUMAN B:[21-341] --------------------EQFAVGEIITDMAAAAWKVGLPIGQ--FGCIYLADMNSSESVGSDAPCVVKVEPSD--NGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEGVH--KAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIAS-LMDKCFP----A----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL-------------------------------------------------------
22 PsiBlast_CBE 86.9196% -99 - C1 -3OP5 VRK1_HUMAN C:[22-341] ---------------------QFAVGEIITDMAAAAWKVGLPIGQG--GCIYLADMNSSE---SDAPCVVKVE--------LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKN-KSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEGVH--KAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIAS-LMDKCFP----A----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL-------------------------------------------------------
21 PsiBlast_CBE 86.6896% -96 - C1 -3OP5 VRK1_HUMAN D:[25-341] ------------------------VGEIITDMAAAAWKVGLPI------CIYLADMNSS-----DAPCVVKVEPS-----PLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHD-NGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPEGVH--KAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIAS-LMDKCFP----A----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL-------------------------------------------------------
42 HHSearch 64.9132% -85 - C1 -4HGT KC1D_HUMAN A:[11-293] ------------------------------------YRLGRKIGSGSFGDIYLGTDI-----AAGEEVAIKLECV---HPQLHIESKIYKMMQG--------------GVGIPTIRWCGA----EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN--KNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL-KAAT-----KRQKYERISEKKM--STP----IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLK---------------------------------------------------
40 HHSearch 62.9731% -96 - C1 -4KB8 KC1D_HUMAN A:[21-307] ----------------------------------NRYRLGRKIGSGSFGDIYLGTDI-----AAGEEVAIKLECVKTKHPQLHIESKIYKMMQG--------------GVGIPTIRWCGA----EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY--------------------GTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL-K-------------ERISEKKM--STPIEVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML----------------------------------------------------