@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : new_query: (2014-04-30 )
VVVARAALSCSTVYNTLLPCLPYVQSGGAVPAACCGGIRSVVAAARTTADRRAACTCLKNVAAGAAGGPYISRAAGLPGRCGVSVPFKISPNVNCNAVN

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------------.........10.....--...20....------------------.----..----------------------.-------------------30----------.--.----.......40....-----------------....50......--..60.-....---.------.---------.-----------70---------.......--..80.....--...90........-----------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------VVVARAALSCSTVYNT--LLPCLPYVQ------------------S----GG----------------------A-------------------V-----------P--A----ACCGGIRSVVAAA-----------------RTTADRRAACTC--LKNVA-AGAA---G------G---------P-----------Y----------ISRAAGL--PGRCGVSVP--FKISPNVNCNAVN-----------------------
24 HHSearch 93.0645%-150 - C3 -1SIY - NLTP1_VIGRR A:[1-91] --------------------------------------------------------------------------------------------------MTCGQVQGN--LAQCIGFLQ------------------K----GG----------------------V-------------------V-----------P--P----SCCTGVKNILNSS-----------------RTTADRRAVCSC--LKAAA-GAVR----------G---------I-----------N----------PNNAEAL--PGKCGVNIP--YKISTSTNCNSIN-----------------------
20 HHSearch 92.4654%-150 - C3 -2ALG NLTP1_PRUPE A:[1-92] -------------------------------------------------------------------------------------------------MITCGQVSSS--LAPCIPYVR------------------G----GG----------------------A-------------------V-----------P--P----ACCNGIRNVNNLA-----------------RTTPDRQAACNC--LKQLS-ASVP----------G---------V-----------N----------PNNAAAL--PGKCGVSIP--YKISASTNCATVK-----------------------
22 HHSearch 91.6751%-133 - C3 -1AFH - NLTP_MAIZE A:[1-93] -------------------------------------------------------------------------------------------------AISCGQVASA--IAPCISYAR------------------G----QG----------------------SG------------------P-----------S--A----GCCSGVRSLNNAA-----------------RTTADRRAACNC--LKNAA-AGV----S------G---------L-----------N----------AGNAASI--PSKCGVSIP--YTISTSTDCSRVN-----------------------
11 SP3 90.1447%-146 - C3 -1FK5 NLTP_MAIZE A:[1-93] -------------------------------------------------------------------------------------------------AISCGQVASA--IAPCISYAR------------------G----QG----------------------SG------------------P-----------S--A----GCCSGVRSLNNAA-----------------RTTADRRAACNC--LKNAA-AG-V---S------G---------L-----------N----------AGNAASI--PSKCGVSIP--YTISTSTDCSRVN-----------------------
21 HHSearch 84.8247%-133 - C3 -1T12 - NLTP1_TOBAC A:[1-91] -------------------------------------------------------------------------------------------------AITCGQVTSN--LAPCLAYLR------------------N----TG------------------------------------------P-----------L--G----RCCGGVKALVNSA-----------------RTTEDRQIACTC--LKSAA-GAIS----------G---------I-----------N----------LGKAAGL--PSTCGVNIP--YKISPSTDCSKVQ-----------------------
25 HHSearch 82.9738%-150 - C3 -1BWO NLTP1_WHEAT A:[1-90] --------------------------------------------------------------------------------------------------IDCGHVDSL--VRPCLSYVQ------------------G----GP----------------------G-------------------P-----------S--G----QCCDGVKNLHNQA-----------------RSQSDRQSACNC--LKGIA-RGIH----------N---------L-----------N----------EDNARSI--PPKCGVNLP--YTISLNIDCSRV------------------------
34 HHSearch 62.6427%-137 * C3 *1BEA - ITRF_MAIZE A:[15-109] ---------------------------------------------------------------------------------------------------------NP--LPSCRWYVTSRTC--------------G----IG----------------------PR------------------LPWPEL------K--R----RCCRELADI-------------------------PAYCRCTA--LSILM-DGAI---PPGPDAQLEGR------L-----------EDLPGCPREVQRGFAATLVTEAECNLATI--------------------------------------
38 HHSearch 60.4617%-126 - C3 -1W2Q - CONG_ARAHY A:[22-121] --------------------------------------------------------------------------------------------------------RVN--LKPCEQHIM------------------QRIM-GEQEQ-------------------YDSYDIRSTRSSD-------Q-----------Q--Q----RCCDELNEME----------------------N-TQGCMCEA--LQQIM-ENQC---D------RLQD------R-----------QMVQQF-----KRELMSL--PQQCNFRAPQRCDLDV-------------------------------
36 HHSearch 57.7023%-148 - C3 -1SM7 - ? A:[13-101] ---------------------------------------------------------------------------------------------------------QH--LRACQQWIR------------------QQLA-GSPFSENQWGPQQGP---------S-------------------L-----------R--E----QCCNELYQE-------------------------DQVCVCPT--LKQAA-KSVRVQ-G------Q---------HGPFQSTR----I----------YQIAKNL--PNVCNMKQI--------------------------------------
33 HHSearch 54.5720%-130 - C3 -1B1U - IAAT_ELECO A:[15-109] ---------------------------------------------------------------------------------------------------------NP--LDSCRWYVS------------------TRTCGVG----------------------PRLATQE-------------M-----------K--A----RCCRQLEAI-------------------------PAYCRCEA--VRILM-DGVV---TPS----GQHEGRLLQDLPGCPRQVQR--A----------FAPKLVT--EVECNLATI--H-----------------------------------
14 SP3 52.9315%-136 - C3 -1HSS - IAA1_WHEAT A:[5-124] -------------------------------------------------------------------------------------------MCYPGQAFQ----VPA--LPACRPLLRLQC---------------N----GS----------------------Q-------------------V-----------P--EAVLRDCCQQLAHI-------------------------SEWCRCGA--LYSML-DSMY---K------E---------H-----------GAFPRCRREVVKLTAASI--TAVCRLPIV----VDASGDGAYVCKDVAAYPDA--------------
35 HHSearch 51.0422%-105 - C3 -3OB4 - ? A:[427-485] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H-----------Q--E----RCCNELNEFE-----------------------NNQRCMCEA--LQQIM-ENQS---DRLQ---G---------R-----------QQEQQF-----KRELRNL--PQQCGLRAP--------------------------------------
37 HHSearch 50.6822%-103 - C3 -1PSY - 2SS_RICCO A:[25-119] ---------------------------------------------------------------------------------------------------------KD--LSSCERYLR------------------QSSS-RR----------------------STGEEVLRMPGDENQQQESQQ-----------L--Q----QCCNQVKQV-------------------------RDECQCEA--IKYIA-EDQI---QQG----Q---------LHGEESER----V----------AQRAGEI--VSSCGVRCM--------------------------------------
2 Fugue 50.6027%-110 - C3 -2RKN DIRL1_ARATH A:[1-77] ------------------------------------------------------------------------------------------------AIDLCGMSQDE--LNECKPAVS------------------K----EN----------------------P-------------------T-----------SPSQ----PCCTALQHA---------------------------DFACLCG-YKNSP-WLGS---F------G---------V-----------D----------PELASAL--PKQCGLANA--------PTC---------------------------
31 HHSearch 50.4223%-130 - C3 -2LVF - ? A:[16-101] ---------------------------------------------------------------------------------------------------------QM--LSHCRMYMR------------------QQME-ES----------------------T-------------------YQTMPRRGMEPHM--S----ECCEQLEGM-------------------------DESCRCEG--LRMMM-RMMQQKEM------Q---------PRGEQMRR----M----------MRLAENI--PSRCNLS----------------------------------------
30 HHSearch 50.3318%-160 - C3 -1S6D - 2SS8_HELAN A:[19-97] ---------------------------------------------------------------------------------------------------------EM--LNHCGMYLM------------------KNLGERS----------------------QVSPRMREED----------H-----------K--Q----LCCMQLKNLD-------------------------EKCMCPA--IMMML-NEPM---W------I---------RMRDQ-------V----------MSMAHNL--PIECNLM----------------------------------------
9 Fugue 48.9812% -90 - C3 -1W2Q - CONG_ARAHY A:[1-127] -------------------------------------------------------------------------------------GPMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTR----SS----------------------D-------------------Q-----------Q--Q----RCCDELNEMENTQ-----------------GCMCEALQQIMENQCDRLQ-DRQM---V------Q---------Q-----------F----------KRELMSL--PQQCNFRAP--QRCDLDVSGGRCS-----------------------
26 HHSearch 46.9122%-110 - C3 -2RKN DIRL1_ARATH A:[2-75] -------------------------------------------------------------------------------------------------IDLCGMSQDE--LNECKPAVS------------------K----ENPT--------------------S-------------------P-----------S--Q----PCCTALQHA-------------------------DFACLCGY--KNSPW-LGS----F------G---------V-----------D----------PELASAL--PKQCGLANA--P-----------------------------------
18 SP3 46.5216%-112 - C3 -1HO1 - PDXJ_ECOLI A:[2-243] AELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEEGGLDVAGQRDK--MRDACKRLA------------------D----AG----------------------IQVSLF--------------I-----------D--A----D----EEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELAR--IAKAA-TFAA---SL-----G---------LKVNAGHGLTYHN----------VKAIAAI--PEMHELNIG--HAI--------IGRAVMTGLKDAVAEMKRLMLEARG
4 Fugue 46.2817% -66 - C3 -1PSY - 2SS_RICCO A:[1-125] -----------------------------------------------------------------------------------AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLR------------------Q----SSSRRSTGEEVLRMPGDENQQQESQ-------------------Q-----------L--Q----QCCNQVKQVRDEC-----------------QCEAIKYIAEDQ--IQQGQLHGEE---S------E---------R-----------V----------AQRAGEI--VSSCGVRCM--RQTRTN------------------------------


User Run . : Multi Template Modeling Result:

(4 SA) .........10........20........30........40........50........60........70........80........90........
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VVVARAALSCSTVYNTLLPCLPYVQSGGAVPAACCGGIRSVVAAARTTADRRAACTCLKNVAAGAAGGPYISRAAGLPGRCGVSVPFKISPNVNCNAVN
44 59.19100% -82 - C- -M044 - A:[7-100] VVVARAALSCSTVYNTLLPCLPYVQSGGAVPAACCGGIRSVVAAARTTADRRAACTCLKNVAAGAAGGPYISRAAGLPGRCGVSVPFKISPNVNCNAVN
41 59.17100% -86 - C- -M041 - A:[7-134] VVVARAALSCSTVYNTLLPCLPYVQSGGAVPAACCGGIRSVVAAARTTADRRAACTCLKNVAAGAAGGPYISRAAGLPGRCGVSVPFKISPNVNCNAVN
42 56.29100% -74 - C- -M042 - A:[7-134] VVVARAALSCSTVYNTLLPCLPYVQSGGAVPAACCGGIRSVVAAARTTADRRAACTCLKNVAAGAAGGPYISRAAGLPGRCGVSVPFKISPNVNCNAVN
40 55.01100% -73 - C- -M040 - A:[7-100] VVVARAALSCSTVYNTLLPCLPYVQSGGAVPAACCGGIRSVVAAARTTADRRAACTCLKNVAAGAAGGPYISRAAGLPGRCGVSVPFKISPNVNCNAVN