@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : 136_tII_ARATH: (2014-05-02 )
RVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAACDVAYPTC

Atome Classification :

(20 SA) -----------------------------------------------------.....---....10....--..--..---20.....-----.-.-------------.30-.--.-----.......40.-----------..-.....50..--.-.------------....--------60.------...-....70....-..-------..-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------------------RVVKG---SGEEVNVTCD--AT--QL---SSCVTAV-----S-T-------------GA--P--P-----STDCCGKLKE-----------HE-TCLCTYIQN--P-L------------YSSY--------VTS------PNA-RKTLAACDVA-YP-------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 HHSearch 92.5245%-108 - C3 -1N89 NLT2G_WHEAT A:[1-67] --------------------------------------------------------------------ACQ--AS--QL---AVCASAI-----L-S-------------GA--K--P-----SGECCGNLRA-----------QQ-GCFCQYAKD--P-T------------YGQY--------IRS------PHA-RDTLTSCGLA-VP-------HC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 84.7343%-117 - C3 -1L6H - NLTPX_ORYSJ A:[1-68] -------------------------------------------------------------------AGCN--AG--QL---TVCTGAI-----A-G-------------GA--R--P-----TAACCSSLRA-----------QQ-GCFCQFAKD--P-R------------YGRY--------VNS------PNA-RKAVSSCGIA-LP-------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 Fugue 84.5042%-118 - C3 -1L6H - NLTPX_ORYSJ A:[1-69] -------------------------------------------------------------------AGCN--AG--QL---TVCTGAI-----A-G-------------GA--R--P-----TAACCSSLRA-----------QQ-GCFCQFAKD--P-R------------YGRY--------VNS------PNA-RKAVSSCGIA-LP-------TCH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 SP3 81.3336%-118 - C3 -1L6H - NLTPX_ORYSJ A:[1-69] -------------------------------------------------------------------AGCN--AG--QL---TVCTGAI-----A-G-------------GA--R--P-----TAACCSSLRA-----------QQ-GCFCQFAKD--P-R------------YGRY--------VNS------PNA-RKAVSSCGIA-LP-------TCH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 HHSearch 80.7034%-102 - C3 -2RKN DIRL1_ARATH A:[4-77] --------------------------------------------------------------------LCGMSQD--EL---NECKPAV-----S-K-------------ENPTS--P-----SQPCCTALQH-----------ADFACLCGYKNS--P-W------------LGSFG-------VDP------ELA-SALPKQCGLA-NAP------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 Fugue 77.3631% -82 - C3 -2RKN DIRL1_ARATH A:[1-77] ---------------------------------------------------------------AIDLCGMS--QD--EL---NECKPAV-----S-K-------------EN--PTSP-----SQPCCTALQHA----------DF-ACLCGYKNS--P-W------------LGSFG-------VDP------ELA-SALPKQCGLA-NAP------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 67.6524% -98 - C3 -1T12 - NLTP1_TOBAC A:[2-78] -------------------------------------------------------------------ITCG--QVTSNL---APCLAYL-----R-N-------------TG-----P-----LGRCCGGVKALVNSARTTEDRQI-ACTC--LKS--A-A-------------GAISG------INL------GKA-AGLPSTCGVN-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 65.9822% -87 - C3 -1AFH - NLTP_MAIZE A:[2-80] -------------------------------------------------------------------ISCG--QVASAI---APCISYA-----R-G-------------QG--SG-P-----SAGCCSGVRSLNNAARTTADRRA-ACNC--LKN--A-A-------------AGVSG------LNA------GNA-ASIPSKCGVS-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 Fugue 65.4618% -86 - C3 -1S6D - 2SS8_HELAN A:[1-103] ---------------------------------------------------PYGRGRT---ESGCYQQMEE--AE--ML---NHCGMYL-----M-KNLGERSQVSPRMREE--D--H-----KQLCCMQLKNL----------DE-KCMCPAIMM--M-L------------NEPM--------WIRMRDQVMSMA-HNLPIECNLM-SQ-------PCQM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 61.2727%-102 - C3 -1HYP - HPSE_SOYBN A:[6-73] -------------------------------------------------------------------PSCP------DL---SICLNILGG---S-L-------------GT-----------VDDCCALIGGLGDIE------AI-VCLCIQLRA-----------------LGI---------LNL------NRNLQLILNSCGRS-YP-------S--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 61.0827% -87 - C3 -2ALG NLTP1_PRUPE A:[2-79] -------------------------------------------------------------------ITCG--QVSSSL---APCIPYV-----R-G-------------GG--A--V-----PPACCNGIRNVNNLARTTPDRQA-ACNC--LKQ--L-S-------------ASVPG------VNP------NNA-AALPGKCGVS-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 SP3 60.5116% -66 * C3 *1FK5 NLTP_MAIZE A:[1-93] ------------------------------------------------------------------AISCGQVAS--AI---APCISYA-----R-G-------------QG--SG-P-----SAGCCSGVRS-----------LN-NA----ART--T-ADRRAACNCLKNAAAGVSG------LNA------GNA-ASIPSKCGVS-IPYTISTSTDCSRVN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 55.0826% -53 - C3 -1BWO NLTP1_WHEAT A:[7-78] -------------------------------------------------------------------------DS--LV---RPCLSYV-----Q-G-------------GP--G--P-----SGQCCDGVKNLHNQARSQSDRQS-ACNCLKGIA--R-G------------IH-N--------LNE------DNA-RSIPPKCGVN-LP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 SP3 50.9612% -75 - C3 -1PS6 PDXA_ECOLI A:[1-328] VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPY---SPNSPAQPQT--AG--TLTLLPVALRAP-----V-T-------------AG--Q--L-----AVENGHYVVE-----------TL-ARACDGCLN--G-E------------FAAL--------ITG------PVH-KGVINDAGIP-FT-------GHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ
18 HHSearch 47.5721% -62 - C3 -1SIY - NLTP1_VIGRR A:[7-78] -------------------------------------------------------------------------QG--NL---AQCIGFL-----Q-K-------------GG--V--V-----PPSCCTGVKNILNSSRTTADRRA-VCSCLKAAA--G-A------------VR-G--------INP------NNA-EALPGKCGVN-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 SP3 43.9211% -73 - C3 -1F9M - TRXF_SPIOL A:[10-121] --------------------------------------------------------ME---AIVGKVTEVN--KD--TF------WPIV-----KAA-------------GD--K--PVVLDMFTQWCGPCKA-----------MA-PKYEKLAEEY-L-DVI----------FLKL--------DCN------QEN-KTLAKELGIRVVP-------TFKILKENSVVGEVTGAKYDKLLEAIQAARS--------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 SP3 40.7411% -74 - C3 -1U78 - TC3A_CAEEL A:[2-104] ----------------------------------------------------------------PRGSALS--DT--ER---AQ-LDVM-----K-L-------------LN--V--S-----LHEMSRKISR-----------SR-HCIRVYLKD--PVS------------YGTSKRAPRRKALSV------RDE-RNVIRAASNS-CK-------TARDIRNELQLSASKRTILNVIKRSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 Fugue 40.3213% -49 - C2 -2JYS - POL_SFV1 A:[8-98] ---------------------------------------------------QPLEAEI---KGTKLKAHWD--SG--AT---ITCVPEAFLEDER-P-------------IQ--T--M-----LIKTIHGEKQ-----------QD-VYYLTFKVQGRK-V------------EAEV--------LAS------PYD-YILLNPSDVP-WL-------MKKPL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 Fugue 37.8910% -24 - C3 -1CBU - COBU_SALTY A:[1-180] ----------------------------------------------------MILVTGGARSGKSRHAEAL--IG--D----APQVLYI-----A-T-------------SQ--I--L-----DDEMAARIQH-----------HK-DG-----RP--A-H------------WRTA--------ECW------RHL-DTLITADLAP-DD-------AILLECITTMVTNLLFALGGENDPEQWDYAAMERAIDDEIQILIAACQRCPAKVVLVTNEVGMGIVPENRLARHFRDIAGRVNQRLAAAADEVWLVVSGIGVKIK------------------------------------------------------------------------------------------
5 Fugue 34.5516% -55 - C3 -2J9W - ? A:[120-220] -------------------------------HHMGNLNRCIADIVSLFITVMDKLRLE---IRAMDEIQPD--LR--EL---METMNRM-----S-H--------------L--P--P-----DFEGREKVSQ-----------WL-QKLSSMSA-------------------SDE--------LDD------SQV-RQMLFDLESA-YN-------AFNRFLH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


User Run . : Multi Template Modeling Result:

(4 SA) .........10........20........30........40........50........60........70........
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) RVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAACDVAYPTC
38 95.84100%-122 - C- -M038 - A:[1-110] RVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAACDVAYPTC
41 95.48100%-113 - C- -M041 - A:[1-152] RVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAACDVAYPTC
39 94.59100%-113 - C- -M039 - A:[1-110] RVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAACDVAYPTC
40 94.25100%-107 - C- -M040 - A:[1-152] RVVKGSGEEVNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAACDVAYPTC