@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : new_query: (2014-05-06 )
AVPCSTVDMKAAACVGFATGKDSKPSQACCTGLQQLAQTVKTVDDKKAICRCLKASSKSLGIKDQFLSKIPAACNIKVGFPVSTNTNCETIH

Atome Classification :

(20 SA) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......-..--10.........----20--.------.----.------------.-----------.-----------.---...---30....--....40.---------------...-----------....50...-..-...60-------.---------.-------.----------......70-......--...80........90.----------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVPCSTV-DM--K-AAACVGFAT----G---K------D----S------------K-----------P-----------S---QAC---CTGLQQ--LAQTVKT---------------VDD-----------KKAICRCLK-AS-SKSL--------G---------I-------K----------DQFLSKI--PAACNI--KVGFPVSTNTNCETIH----------------------------------------------------
21 HHSearch 96.6132% -90 - C2 -1AFH - NLTP_MAIZE A:[1-93] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AISCGQV-AS--A-IAPCISYAR----G---Q------G----S------------G-----------P-----------S---AGC---CSGVRS--LNNAART---------------TAD-----------RRAACNCLK-NA-AAGVS-------G---------L-------N----------AGNAASI--PSKCGV--SIPYTISTSTDCSRVN----------------------------------------------------
24 HHSearch 96.1829%-114 - C2 -2ALG NLTP1_PRUPE A:[1-92] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------MITCGQV-SS--S-LAPCIPYVR----G---G-----------G------------A-----------V-----------P---PAC---CNGIRN--VNNLART---------------TPD-----------RQAACNCLK-QL-SASVP-------G---------V-------N----------PNNAAAL--PGKCGV--SIPYKISASTNCATVK----------------------------------------------------
11 SP3 95.8831% -97 - C2 -1FK5 NLTP_MAIZE A:[1-93] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AISCGQV-AS--A-IAPCISYAR----G---Q------G----S------------G-----------P-----------S---AGC---CSGVRS--LNNAART---------------TAD-----------RRAACNCLK-NA-AAGVS-------G---------L-------N----------AGNAASI--PSKCGV--SIPYTISTSTDCSRVN----------------------------------------------------
25 HHSearch 94.5931%-109 - C2 -1SIY - NLTP1_VIGRR A:[1-91] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTCGQV-QG--N-LAQCIGFLQ----K---G-----------G------------V-----------V-----------P---PSC---CTGVKN--ILNSSRT---------------TAD-----------RRAVCSCLK-AA-AGAVR-------G---------I-------N----------PNNAEAL--PGKCGV--NIPYKISTSTNCNSIN----------------------------------------------------
22 HHSearch 87.8726%-111 - C2 -1T12 - NLTP1_TOBAC A:[1-91] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AITCGQV-TS--N-LAPCLAYLR----N---T------G-----------------------------P-----------L---GRC---CGGVKA--LVNSART---------------TED-----------RQIACTCLK-SA-AGAIS-------G---------I-------N----------LGKAAGL--PSTCGV--NIPYKISPSTDCSKVQ----------------------------------------------------
26 HHSearch 85.6525%-105 - C2 -1BWO NLTP1_WHEAT A:[1-90] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------IDCGHV-DS--L-VRPCLSYVQ----G---G-----------P------------G-----------P-----------S---GQC---CDGVKN--LHNQARS---------------QSD-----------RQSACNCLK-GI-ARGIH-------N---------L-------N----------EDNARSI--PPKCGV--NLPYTISLNIDCSRV-----------------------------------------------------
37 HHSearch 74.1929%-112 - C2 -1SM7 - ? A:[14-101] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H-LRACQQWIR----Q---Q------LAGS-PFSENQWGPQQGPS-----------L-----------R---EQC---CNELYQ--E-----------------------D-----------QVCVCPTLK-QA-AKSVRVQ-----GQ--------H-------GPFQSTRI---YQIAKNL--PNVCNM--KQI-----------------------------------------------------------------
39 HHSearch 65.4617%-110 - C2 -1W2Q - CONG_ARAHY A:[23-114] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V--N-LKPCEQHIM----Q---RIMGEQEQ----Y------------D-----------SYDIRSTRSSDQQ---QRC---CDELNE--ME----N-----------------T-----------QGCMCEALQ-QI-MENQCDRLQ---D---------RQMVQ---QF---------KRELMSL--PQQCNF--RAP-----------------------------------------------------------------
34 HHSearch 65.0719%-114 - C2 -1BEA - ITRF_MAIZE A:[16-109] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P-LPSCRWYVTSRTCG---I------G----P------------R-----------LPWPEL------K---RRC---CRELAD--I-----------------------P-----------AYCRCTALS-IL-MDGAIPPG----P---------DAQLEGRLEDLPGCPREVQRGFAATLVTEAECNL--ATI-----------------------------------------------------------------
27 HHSearch 64.5824% -95 - C2 -2RKN DIRL1_ARATH A:[3-75] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLCGMS-QD--E-LNECKPAVS----K---E------N----PT-----------S-----------P-----------S---QPC---CTALQH--A-----------------------D-----------FACLCGYKN-SPWLGSF--------G---------V-------D----------PELASAL--PKQCGL--ANAP----------------------------------------------------------------
2 Fugue 64.3124% -85 - C2 -2RKN DIRL1_ARATH A:[1-77] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AIDLCGMS-QD--E-LNECKPAVS----K---E------NP---T------------S-----------P-----------S---QPC---CTALQH--A-----------------------D-----------FACLCGYKNSPW-LGSF--------G---------V-------D----------PELASAL--PKQCG--------LANAPTC--------------------------------------------------------
20 SP3 62.9515%-106 - C2 -1HSS - IAA1_WHEAT A:[5-124] ------------------------------------------------------------------------------------------------------------------------------------------------------------------MCYPGQAFQ-----VP--A-LPACRPLLR----LQCNG------S----Q------------V-----------P-----------EAVLRDC---CQQLAH--I-----------------------S-----------EWCRCGALY-SM-LDSMYKEHGAFPR---------C-------RREVV------KLTAASI--TAVCRL--PIV--VDASGDGAYVCKDVAAYPDA-------------------------------------------
33 HHSearch 58.9618% -72 - C2 -1PSY - 2SS_RICCO A:[26-117] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D-LSSCERYLR----Q---SSS----R----RSTGEEVLR----MPGDENQQQESQQ-----------L---QQC---CNQVKQ--V-----------------------R-----------DECQCEAIK-YI-AEDQIQQ-----GQ--------LHGEESERV----------AQRAGEI--VSSCGV--R-------------------------------------------------------------------
40 HHSearch 57.6718% -85 - C2 -1S6D - 2SS8_HELAN A:[19-97] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E--M-LNHCGMYLM----K---N------LGERSQVSPRMREE----D-----------H-----------K---QLC---CMQLKN--LD----------------------------------EKCMCPAIM-MM-LNEPMW------IRMRD-----Q-------V----------MSMAHNL--PIECNL--M-------------------------------------------------------------------
35 HHSearch 56.3519% -85 - C2 -3OB4 - ? A:[429-485] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERC---CNELNE--FE---------------------NN-----------QRCMCEALQ-QI-MENQSDRLQ---G---------R-------QQEQQF-----KRELRNL--PQQCGL--RAP-----------------------------------------------------------------
17 SP3 55.599%-106 - C2 -1QPO - NADC_MYCTU A:[1-284] GLSDWELAAARAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHV-AAAGS-VVDALRAVR---------------N----A------------A-----------P-----------D---LPCEVEVDSLEQ--LDAVLPE---------------KPELILLDNFAVWQTQTAVQRRD-SR-APTVMLESSG--G---------L-------S----------LQTAATY---AETGV--DY---LAVGALTHSVRVLDIGLDM--------------------------------------------
9 Fugue 55.3525% -46 - C2 -4B8V ? A:[36-224] ---------------------------------------------------------------------------------------------------------------------CGSTSNIKYTVVKGDTLTSIAKKFKSGICNIVSVNKLANPNLIELGATLIIPENCSNP-DN--K-S--CVS-----------T------P----A------------E-----------P-----------T---ETC---VPGLPG---SYTIVS---------------GDT-----------LTNISQDFN-IT-LDSL--------I---------A-------A----------NTQIEN---PDAIDVGQIITVPVCPSSQCEAVGTYNIVAGDLFVDLAATYHTTIGQIKALNNNVNPSKLKVGQQIILPQDCKNVT
4 Fugue 53.2022% -70 - C2 -2OP5 ? A:[5-115] --------------------------------------------------------------------------------------------------------------------------------------------------------------------TDETAFLNSLFMDF--TSENELELFLK----S---L------D----E------------V-----------W-----------S---EDL---YSRLSAAGLIRHVISKVWNKEQHRISMVFEYDS-----------KEGYQKCQE-II-DKEF--------G---------I-------TL---------KEKLKKF--VFKIHN--NRGVVVSEFIR---------------------------------------------------------
36 HHSearch 49.6313% -76 - C2 -1B1U - IAAT_ELECO A:[16-109] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P-LDSCRWYVS----T---RTCGV--G----P------------RLATQE------M-----------K---ARC---CRQLEA--I-----------------------P-----------AYCRCEAVR-IL-MDGVVTPS----GQHEGRLLQDL-------PGCPRQVQRA-FAPKLVT--EVECNL--ATIH----------------------------------------------------------------
3 Fugue 49.3321% -34 - C2 -1L6H - NLTPX_ORYSJ A:[1-69] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCNAG-----Q-LTVCTGAIA----G----------G----A------------R-----------P-----------T---AAC---CSSLRA--------------------------Q-----------QGCFCQFAK-DP-RYGR--------Y---------V-------N----------SPNARKA--VSSCGI--A-------LPTCH-------------------------------------------------------


User Run . : Multi Template Modeling Result:

(2 SA) .........10........20........30........40........50........60........70........80........90.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) AVPCSTVDMKAAACVGFATGKDSKPSQACCTGLQQLAQTVKTVDDKKAICRCLKASSKSLGIKDQFLSKIPAACNIKVGFPVSTNTNCETIH
45 98.31100%-120 - C- -M045 - A:[1-93] AVPCSTVDMKAAACVGFATGKDSKPSQACCTGLQQLAQTVKTVDDKKAICRCLKASSKSLGIKDQFLSKIPAACNIKVGFPVSTNTNCETIH
43 97.52100%-128 - C- -M043 - A:[1-140] AVPCSTVDMKAAACVGFATGKDSKPSQACCTGLQQLAQTVKTVDDKKAICRCLKASSKSLGIKDQFLSKIPAACNIKVGFPVSTNTNCETIH