@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : 549_tII_BRANA: (2014-05-10 )
TRVESFGEVAQSCVVTELAPCLPAMTLTGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNARKVLDFCKVPFPSC

Atome Classification :

(20 SA) ----------------------------------------------------------------------------.........10..-----.--..--..---.20....--.--...--30-..-----------.......---------40-----------.-----.-......50----..-.------------...--.--------.60--...-.....70.....---------..--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------------------TRVESFGEVAQSC-----V--VT--EL---APCLPAM--T--LTG--D--PT-----------TECCDKL---------VE-----------Q-----K-PCLCGYIR----NP-A------------YSM--Y--------VTS--PNA-RKVLDFCKVPFP---------SC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 HHSearch 90.9237%-116 - C4 -1N89 NLT2G_WHEAT A:[1-67] ---------------------------------------------------------------------------------------AC-----Q--AS--QL---AVCASAI--L--SGA--K--PS-----------GECCGNL---------RA-----------Q-----Q-GCFCQYAK----DP-T------------YGQ--Y--------IRS--PHA-RDTLTSCGLAVP---------HC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 85.7737%-105 - C4 -1L6H - NLTPX_ORYSJ A:[1-68] --------------------------------------------------------------------------------------AGC-----N--AG--QL---TVCTGAI--A--GGA--R--PT-----------AACCSSL---------RA-----------Q-----Q-GCFCQFAK----DP-R------------YGR--Y--------VNS--PNA-RKAVSSCGIALP---------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 Fugue 85.7536%-105 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] --------------------------------------------------------------------------------------AGC-----N--AG--QL---TVCTGAI--A--GGA--R--PT-----------AACCSSL---------RA-----------Q-----Q-GCFCQFAK----DP-R------------YGR--Y--------VNS--PNA-RKAVSSCGIALP---------TCH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 SP3 83.1332%-105 - C4 -1L6H - NLTPX_ORYSJ A:[1-69] --------------------------------------------------------------------------------------AGC-----N--AG--QL---TVCTGAI--A--GGA--R--PT-----------AACCSSL---------RA-----------Q-----Q-GCFCQFAK----DP-R------------YGR--Y--------VNS--PNA-RKAVSSCGIALP---------TCH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 82.2231%-112 - C4 -1T12 - NLTP1_TOBAC A:[2-78] --------------------------------------------------------------------------------------ITC-----G--QVTSNL---APCLAYL--R--NTG-----PL-----------GRCCGGV---------KALVNSARTTEDRQ-----I-ACTC--LK----SA-A-------------GA--ISG------INL--GKA-AGLPSTCGVNIP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 HHSearch 81.5629%-102 - C4 -1AFH - NLTP_MAIZE A:[2-80] --------------------------------------------------------------------------------------ISC-----G--QVASAI---APCISYA--R--GQG--SG-PS-----------AGCCSGV---------RSLNNAARTTADRR-----A-ACNC--LK----NA-A-------------AG--VSG------LNA--GNA-ASIPSKCGVSIP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 HHSearch 77.8030%-107 - C4 -2RKN DIRL1_ARATH A:[4-77] ---------------------------------------------------------------------------------------LC-----GMSQD--EL---NECKPAV--S--KENPTS--PS-----------QPCCTAL---------QH-----------A-----DFACLCGYKN----SP-W------------LGS--FG-------VDP--ELA-SALPKQCGLANAP--------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 Fugue 76.1928%-100 - C4 -2RKN DIRL1_ARATH A:[1-77] ------------------------------------------------------------------------------------AIDLCGM---S--QD--EL---NECKPAV--S--KEN--PTSPS-----------QPCCTAL---------QHA----------D-----F-ACLCGYKN----SP-W------------LGS--FG-------VDP--ELA-SALPKQCGLANAP--------TC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 Fugue 74.6522%-118 - C4 -1BWO NLTP1_WHEAT A:[1-90] ------------------------------------------------------------------------------------IDCGH-----V--DS--LV---RPCLSYV--Q--GGP---G-PS-----------GQCCDGVKNLHNQARSQS-----------D-----R-QSACNCLK----GI-A------------RGIHNL--------N-E--DNA-RSIPPKCG--VNLPYTISLNIDCSRV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 73.2227%-136 - C4 -1HYP - HPSE_SOYBN A:[6-73] --------------------------------------------------------------------------------------PSC-----P------DL---SICLNILGGS--LGT------V-----------DDCCALI---------GGLGDIE------A-----I-VCLCIQLR----A---------------LGI-----------LNL--NRNLQLILNSCGRSYP---------S---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 SP3 70.5219%-125 * C4 *1S6D - 2SS8_HELAN A:[1-103] ------------------------------------------------------------------------------PYGRGRTESGCYQQMEE--AE--ML---NHCGMYL--MKNLGE--R--SQVSPRMREEDHKQLCCMQL---------KNL----------D-----E-KCMCPAIMMMLNEP-M------------WIR--M--------RDQVMSMA-HNLPIECNLMSQ---------PCQM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 68.5229%-110 - C4 -2ALG NLTP1_PRUPE A:[2-79] --------------------------------------------------------------------------------------ITC-----G--QVSSSL---APCIPYV--R--GGG--A--VP-----------PACCNGI---------RNVNNLARTTPDRQ-----A-ACNC--LK----QL-S-------------AS--VPG------VNP--NNA-AALPGKCGVSIP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 SP3 66.7923% -63 - C4 -1PS6 PDXA_ECOLI A:[1-328] ----------------------VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQ-----T--AG--TLTLLPVALRAP--V--TAG--Q--LA-----------VENGHYV---------VE-----------T-----L-ARACDGCL----NG-E------------FAA--L--------ITG--PVH-KGVINDAGIPFT---------GHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ-------------------------------------
14 HHSearch 64.9127% -59 - C4 -1BWO NLTP1_WHEAT A:[8-78] --------------------------------------------------------------------------------------------------S--LV---RPCLSYV--Q--GGP--G--PS-----------GQCCDGV---------KNLHNQARSQSDRQ-----S-ACNCLKGI----AR-G------------IH---N--------LNE--DNA-RSIPPKCGVNLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 SP3 63.7023% -82 - C4 -1FK5 NLTP_MAIZE A:[1-93] -------------------------------------------------------------------------------------AISC-----GQVAS--AI---APCISYA--R--GQG--SG-PS-----------AGCCSGV---------RS-----------L-----N-NA----AR----TT-ADRRAACNCLKNAAAG--VSG------LNA--GNA-ASIPSKCGVSIPYTISTST--DCSRVN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 Fugue 59.3212%-107 - C4 -1QAS - PLCD1_RAT A:[205-298] -----------------------------------------------------------------YKMLTQRAEIDRAFEEAAGSAETL-----S--VE--RL---VTFLQHQ--Q--REE--E--AG-----------PALALSL---------IE-----------RYEPSET-AKAQRQMT----KD-G------------FLM--Y--------LLS--ADG-NAFSLAHRRVYQ---------DM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 Fugue 56.4131% -45 - C1 -1YU0 - ? A:[5-380] VQFRGGTTAQHATFTGAAREITVDTDKNTVVVHDGATAGGFPLARHDLVKTAFIKADKSAVAFTRTGNATASIKAGTIVEVNGKLVQFT-----A--DT--AI---T--MPAL--T--AGT--D--YA-----------IYVCDD-------------------------------GTVRADSN----FS-A------------PTG--Y---------TS--TTA-RKVGGFHYAPGS---------NAAAQAGGNTTAQINEYSLWDIKFRPAALDPRGMTLVAGAFWADIYLLGVNHLTDGTSKYNVTIADGSASPKKSTKFGGDGSAAYSDGAWYNFAEVMTHHGKRLPNYNEFQALAFGTTEATSSGGTDVPTTGVNGTGATSAWNIFTSKWGVVQASGCLWTWGNEFGGVNGASEYTANTGGRGSVYAQPAAALFGGAWNGTSLSGSRAALWYSGPSFSFAFFGARGVCDHLIL
17 HHSearch 55.6123% -90 - C4 -1SIY - NLTP1_VIGRR A:[7-78] -------------------------------------------------------------------------------------------------QG--NL---AQCIGFL--Q--KGG--V--VP-----------PSCCTGV---------KNILNSSRTTADRR-----A-VCSCLKAA----AG-A------------VR---G--------INP--NNA-EALPGKCGVNIP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 Fugue 52.1216%-102 * C6 *1IFY - RD23A_HUMAN A:[156-204] ----------------------------------------------------------------------------------------------------------------T--L--VTG--S--EY-----------ETMLTEI---------MS-----------M-----------GYER----ER-V------------VAA--L--------RASY-NNP-HRAVEYLLTGIP---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 SP3 50.0317% -70 - C6 -1U78 - TC3A_CAEEL A:[2-104] -----------------------------------------------------------------------------------PRGSAL-----S--DT--ER---AQ-LDVM--K--LLN--V--SL-----------HEMSRKI---------SR-----------S-----R-HCIRVYLK----DPVS------------YGT--SKRAPRRKALSV--RDE-RNVIRAASNSCK---------TARDIRNELQLSASKRTILNVIKRSG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


User Run . : Multi Template Modeling Result:

(3 SA) .........10........20........30........40........50........60........70.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) TRVESFGEVAQSCVVTELAPCLPAMTLTGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNARKVLDFCKVPFPSC
40 50.10100% -5 - C- -M040 - A:[3-112] TRVESFGEVAQSCVVTELAPCLPAMTLTGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNARKVLDFCKVPFPSC
38 44.78100% -2 - C- -M038 - A:[3-126] TRVESFGEVAQSCVVTELAPCLPAMTLTGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNARKVLDFCKVPFPSC
41 43.89100% -1 - C- -M041 - A:[3-112] TRVESFGEVAQSCVVTELAPCLPAMTLTGDPTTECCDKLVEQKPCLCGYIRNPAYSMYVTSPNARKVLDFCKVPFPSC