@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : new_query: (2014-05-14 )
ATVPCGTVDMKAAACVGYATGKQPKPSPACCSGLQQLAATVKTVDDKKNICRCLKNGVKAFAGVQDRLLSQIPTACNIKVGFPVSLNTNCET

Atome Classification :

(20 SA) ---------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20---..----.----.-----------------.-----.-----...30---.........40----------..-----------.......50......-..60------.-------.---------.-------.----------.-------...----------70.--.......80----.........90.------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------------------------------------------------------------------------------------------------------------------------------------------------------ATVPCGTVDMKAAACVGYAT----GK----Q----P-----------------K-----P-----SPAC----CSGLQQLAAT-----------VK-----------TVDDKKNICRCLKNG-VKAF------A-------G---------V-------Q----------D-------RLL----------SQI--PTACNIKV-----GFPVSLNTNCET------------------------------------------------------
24 HHSearch 91.6730%-112 - C4 -2ALG NLTP1_PRUPE A:[1-90] ----------------------------------------------------------------------------------------------------------------------------------------------------------MITCGQVSSSLAPCIPYVR----GG----G----------------------A-----V-----PPAC----CNGIRNVNNL-----------AR-----------TTPDRQAACNCLKQL-SASV------P-------G---------V-------N----------P-------NNA----------AAL--PGKCGVSI-----PYKISASTNCAT------------------------------------------------------
11 SP3 89.1531% -95 - C4 -1FK5 NLTP_MAIZE A:[1-93] ----------------------------------------------------------------------------------------------------------------------------------------------------------AISCGQVASAIAPCISYAR----GQ----G----S-----------------G-----P-----SAGC----CSGVRSLNNA-----------AR-----------TTADRRAACNCLKNA-AAGV------S-------G---------L-------N----------A-------GNA----------ASI--PSKCGVSI-----PYTISTSTDCSRVN----------------------------------------------------
21 HHSearch 89.0032% -95 - C4 -1AFH - NLTP_MAIZE A:[1-91] ----------------------------------------------------------------------------------------------------------------------------------------------------------AISCGQVASAIAPCISYAR----GQ----G----S-----------------G-----P-----SAGC----CSGVRSLNNA-----------AR-----------TTADRRAACNCLKNA-AAGV------S-------G---------L-------N----------A-------GNA----------ASI--PSKCGVSI-----PYTISTSTDCSR------------------------------------------------------
22 HHSearch 86.9427%-112 - C4 -1T12 - NLTP1_TOBAC A:[1-89] ----------------------------------------------------------------------------------------------------------------------------------------------------------AITCGQVTSNLAPCLAYLR----NT----G----------------------------P-----LGRC----CGGVKALVNS-----------AR-----------TTEDRQIACTCLKSA-AGAI------S-------G---------I-------N----------L-------GKA----------AGL--PSTCGVNI-----PYKISPSTDCSK------------------------------------------------------
25 HHSearch 86.7329% -97 - C4 -1BWO NLTP1_WHEAT A:[1-89] -----------------------------------------------------------------------------------------------------------------------------------------------------------IDCGHVDSLVRPCLSYVQ----GG---------P-----------------G-----P-----SGQC----CDGVKNLHNQ-----------AR-----------SQSDRQSACNCLKGI-ARGI------H-------N---------L-------N----------E-------DNA----------RSI--PPKCGVNL-----PYTISLNIDCSR------------------------------------------------------
26 HHSearch 85.6827%-117 - C4 -1SIY - NLTP1_VIGRR A:[1-89] -----------------------------------------------------------------------------------------------------------------------------------------------------------MTCGQVQGNLAQCIGFLQ----KG----G----------------------V-----V-----PPSC----CTGVKNILNS-----------SR-----------TTADRRAVCSCLKAA-AGAV------R-------G---------I-------N----------P-------NNA----------EAL--PGKCGVNI-----PYKISTSTNCNS------------------------------------------------------
39 HHSearch 68.6227%-111 - C4 -1SM7 - ? A:[14-101] -------------------------------------------------------------------------------------------------------------------------------------------------------------------HLRACQQWIR----QQ----LAGS-PFSENQWGPQQGP-----S-----L-----REQC----CNELYQE------------------------------DQVCVCPTLKQA-AKSV------RVQ-----GQ--------H-------G----------PFQSTRIYQIA----------KNL--PNVCNMKQ-----I-----------------------------------------------------------------
27 HHSearch 67.6027% -98 - C4 -2RKN DIRL1_ARATH A:[1-75] ---------------------------------------------------------------------------------------------------------------------------------------------------------AIDLCGMSQDELNECKPAVS----KE----N----PT----------------S-----P-----SQPC----CTALQHA------------------------------DFACLCGYKNSPWLGSF--------------G---------V-------D----------P-------ELA----------SAL--PKQCGLAN-----AP----------------------------------------------------------------
2 Fugue 65.3625% -66 - C4 -2RKN DIRL1_ARATH A:[1-77] ---------------------------------------------------------------------------------------------------------------------------------------------------------AIDLCGMSQDELNECKPAVS----KEN---P----T-----------------S-----P-----SQPC----CTALQHA------------------------------DFACLCGYKNSP-WLGS------F-------G---------V-------D----------P-------ELA----------SAL--PKQCGLAN-----------APTC--------------------------------------------------------
30 HHSearch 63.3319%-120 * C4 *1BEA - ITRF_MAIZE A:[16-110] -------------------------------------------------------------------------------------------------------------------------------------------------------------------PLPSCRWYVTSRTCGI----G----P-----------------R-----LPWPELKRRC----CRELADI------------------------------PAYCRCTALSIL-MDGA------IPPGPDAQLEGR------L-------EDLPGCPREVQR-------GFA----------ATLVTEAECNLAT-----IS----------------------------------------------------------------
32 HHSearch 53.9826%-111 - C4 -2DS2 - ? B:[8-64] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RQC----CNQLRQV------------------------------DRPCVCPVLRQA-AQQVLQRQIIQ-------GPQQLR----R-------L----------F-------DAA----------RNL--PNICNIPN-----I-----------------------------------------------------------------
38 HHSearch 52.9722% -85 - C4 -3OB4 - ? A:[429-486] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERC----CNELNEFEN----------------------------NQRCMCEALQQI-MENQSDRL--Q-------G---------R-------QQEQQF-----K-------REL----------RNL--PQQCGLRA-----PQ----------------------------------------------------------------
36 HHSearch 51.6514% -81 - C4 -1PSY - 2SS_RICCO A:[25-121] ------------------------------------------------------------------------------------------------------------------------------------------------------------------KDLSSCERYLR----QSSSRRS----TGEEVLRMPGDENQQQESQ-----Q-----LQQC----CNQVKQV------------------------------RDECQCEAIKYI-AEDQ------IQQG----Q---------LHGEESERV----------A-------QRA----------GEI--VSSCGV-------RCMRQ-------------------------------------------------------------
35 HHSearch 51.3618% -93 - C4 -1S6D - 2SS8_HELAN A:[19-97] ------------------------------------------------------------------------------------------------------------------------------------------------------------------EMLNHCGMYLM----KN----LGERSQVSPRMREE---------D-----H-----KQLC----CMQLKNLD------------------------------EKCMCPAIMMM-LNEP------MW------IRM-------RDQ-----V----------M-------SMA----------HNL--PIECNLM------------------------------------------------------------------------
6 Fugue 51.1117% -59 - C4 -4B8V ? A:[36-224] ---------------------------------------------------------------------------------------------------------CGSTSNIKYTVVKGDTLTSIAKKFKSGICNIVSVNKLANPNLIELGATLIIPENCSNPDNKSCVS--------T----P----A-----------------E-----P-----TETC----VPGLPG-SYT-----------IV-----------SGDTLTNISQDFNIT-LDSL------I-------A---------A-------N----------T-------QIE----------NPD--AIDVGQII-----TVPVCPSSQCEAVGTYNIVAGDLFVDLAATYHTTIGQIKALNNNVNPSKLKVGQQIILPQDCKNVT
20 SP3 49.0613% -98 - C4 -1O4U - ? A:[1-273] MEKILDLLMSFVKEDEGKLDLASFPLRNTTAGAHLLLKTENVVASGIEVSRMFLEKMGLLSKFNVEDGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHAKIAATRKILPGLGVLQKIAVVHGGGDCVMIKDNHLKMY------GSAERAVQEVR----K----------I-----------------I-----P-----FTTKIEVEVENLEDALRA-----------VEAGADIVMLDNLSPEEVKDISRRIKDI-NPNVIVEVS-G-------G---------I-------T----------E-------ENV----------SLY---DFETVDVISSSRLTLQEVFVDLSLEIQR--------------------------------------------------
34 HHSearch 45.0016% -78 - C4 -1B1U - IAAT_ELECO A:[16-109] -------------------------------------------------------------------------------------------------------------------------------------------------------------------PLDSCRWYVS----TRTCGVG----P-----------------RLATQEM-----KARC----CRQLEAI------------------------------PAYCRCEAVRIL-MDGV------VTPS----GQHEGRLLQDL-------PGCPRQVQRA-F-------APK----------LVT--EVECNLAT-----IH----------------------------------------------------------------
31 HHSearch 44.4528% -67 - C4 -1PNB - ? B:[12-67] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EQC----CNELYQE------------------------------DQVCVCPTLKQA-AKSV------RVQGQHG-P---------FQSTR---I----------Y-------QIA----------KNL--PNVCNMKQ-----I-----------------------------------------------------------------
29 HHSearch 43.2722% -45 - C4 -1N89 NLT2G_WHEAT A:[5-65] ------------------------------------------------------------------------------------------------------------------------------------------------------------------SQLAVCASAIL----SG----A----------------------K-----P-----SGEC----CGNLRA---------------------------------QQGCFCQYAK-DPTYG-----Q-------Y---------I-------R----------S-------PHA----------RDT--LTSCGLAV-----P-----------------------------------------------------------------
7 Fugue 42.5418% -30 - C4 -2W0C - P6_BPPM2 T:[1-127] ------------------------------------------------------------------------------------------------------------------------------------------------MANFLTKNFVWILAAGVGVWFYQKADNAA----KT----A----T-----------------K-----P-----IADF----LAELQFLVNGSNYVKFPNAGFVL-----------TRDALQDDFIAYDDR-IKAW------L-------G---------T-------H----------D-------RHKDFLAEILDHERRV--KPVYRKLI-----GNIIDASTIRAASGVEL-------------------------------------------------


User Run . : Multi Template Modeling Result:

(2 SA) .........10........20........30........40........50........60........70........80........90.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ATVPCGTVDMKAAACVGYATGKQPKPSPACCSGLQQLAATVKTVDDKKNICRCLKNGVKAFAGVQDRLLSQIPTACNIKVGFPVSLNTNCET
40 37.19100% 26 - C- -M040 - A:[2-117] ATVPCGTVDMKAAACVGYATGKQPKPSPACCSGLQQLAATVKTVDDKKNICRCLKNGVKAFAGVQDRLLSQIPTACNIKVGFPVSLNTNCET
41 36.43100% 20 - C- -M041 - A:[2-117] ATVPCGTVDMKAAACVGYATGKQPKPSPACCSGLQQLAATVKTVDDKKNICRCLKNGVKAFAGVQDRLLSQIPTACNIKVGFPVSLNTNCET