@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : 761_tII_VITVI: (2014-05-14 )
VTCSPTELSSCVGAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLKKFVNSPNARKVASTCGTPIPKC

Atome Classification :

(20 SA) ----------------------------------------------------------------...--.--.--.--..---.10....--.-..--.--20.-----........30-----------.-----.-.---------.....40.-..------------..-----..--.50...-.....60..-.-..-------..-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------VTC--S--P--T--EL---SSCVGAI--T-SS--T--P-P-----SKLCCSKIKE-----------Q-----K-P---------CLCQYLKN-PN------------LK-----KF--VNSPNA-RKVASTCGT-P-IP-------KC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 HHSearch 91.2537% -89 - C6 -1N89 NLT2G_WHEAT A:[1-67] -----------------------------------------------------------------AC--Q--A--S--QL---AVCASAI--L-SG--A--K-P-----SGECCGNLRA-----------Q-----Q-G---------CFCQYAKD-PT------------YG-----QY--IRSPHA-RDTLTSCGL-A-VP-------HC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 HHSearch 90.6643% -92 - C6 -1L6H - NLTPX_ORYSJ A:[1-68] ----------------------------------------------------------------AGC--N--A--G--QL---TVCTGAI--A-GG--A--R-P-----TAACCSSLRA-----------Q-----Q-G---------CFCQFAKD-PR------------YG-----RY--VNSPNA-RKAVSSCGI-A-LP-------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 SP3 89.7542% -92 - C6 -1L6H - NLTPX_ORYSJ A:[1-69] ----------------------------------------------------------------AGC--N--A--G--QL---TVCTGAI--A-GG--A--R-P-----TAACCSSLRA-----------Q-----Q-G---------CFCQFAKD-PR------------YG-----RY--VNSPNA-RKAVSSCGI-A-LP-------TCH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 Fugue 89.7542% -92 - C6 -1L6H - NLTPX_ORYSJ A:[1-69] ----------------------------------------------------------------AGC--N--A--G--QL---TVCTGAI--A-GG--A--R-P-----TAACCSSLRA-----------Q-----Q-G---------CFCQFAKD-PR------------YG-----RY--VNSPNA-RKAVSSCGI-A-LP-------TCH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 Fugue 78.5933% -78 - C6 -2RKN DIRL1_ARATH A:[1-77] --------------------------------------------------------------AIDLCGMS--Q--D--EL---NECKPAV--S-KENPT--S-P-----SQPCCTALQHA----------D-----F-A---------CLCGYKNS-PW------------LG-----SFG-VDPELA-SALPKQCGL-A-NAP------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 HHSearch 76.1332% -67 - C6 -2ALG NLTP1_PRUPE A:[2-79] ----------------------------------------------------------------ITC--G--Q--VSSSL---APCIPYV--R-GG--G--A-V-----PPACCNGIRNVNNLARTTPDRQ-----A-A---------CNC--LKQ-LS-------------A-----SVPGVNPNNA-AALPGKCGV-S-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 HHSearch 74.9031% -90 - C6 -2RKN DIRL1_ARATH A:[9-77] ------------------------------------------------------------------------Q--D--EL---NECKPAV--S-KE--NPTS-P-----SQPCCTALQH-----------A-----DFA---------CLCGYKNS-PW------------LG-----SFG-VDPELA-SALPKQCGL-A-NAP------TC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 HHSearch 72.4329%-105 - C6 -1HYP - HPSE_SOYBN A:[10-73] ------------------------------------------------------------------------------DL---SICLNILGGS-LG--T----------VDDCCALIGG-----------LGDIEAI-V---------CLCIQLRA---------------LG-----I---LNLNRNLQLILNSCGR-S-YP-------S--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 HHSearch 71.9132% -59 - C6 -1AFH - NLTP_MAIZE A:[3-80] -----------------------------------------------------------------SC--G--Q--VASAI---APCISYA--R-GQ--G--SGP-----SAGCCSGVRSLNNAARTTADRR-----A-A---------CNC--LKN-AA-------------A-----GVSGLNAGNA-ASIPSKCGV-S-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 HHSearch 71.1334% -65 - C6 -1T12 - NLTP1_TOBAC A:[3-78] -----------------------------------------------------------------TC--G--Q--VTSNL---APCLAYL--R-NT--G----P-----LGRCCGGVKALVNSARTTEDRQ-----I-A---------CTC--LKS-AA-------------G-----AISGINLGKA-AGLPSTCGV-N-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 SP3 69.7623% -56 - C6 -1FK5 NLTP_MAIZE A:[1-93] ---------------------------------------------------------------AISC--GQVA--S--AI---APCISYA--R-GQ--G--SGP-----SAGCCSGVRS-----------L-----N-N---------A----ART-TADRRAACNCLKNAAA-----GVSGLNAGNA-ASIPSKCGV-S-IPYTISTSTDCSRVN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 HHSearch 66.5927% -55 - C6 -1SIY - NLTP1_VIGRR A:[2-78] -----------------------------------------------------------------TC--G--QVQG--NL---AQCIGFL--Q-KG--G--V-V-----PPSCCTGVKNILNSSRTTADRR-----A-V---------CSCLKAAA-GA------------VR------G--INPNNA-EALPGKCGV-N-IP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 HHSearch 65.0427% -53 - C6 -1BWO NLTP1_WHEAT A:[8-78] ---------------------------------------------------------------------------S--LV---RPCLSYV--Q-GG--P--G-P-----SGQCCDGVKNLHNQARSQSDRQ-----S-A---------CNCLKGIA-RG------------IH------N--LNEDNA-RSIPPKCGV-N-LP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 SP3 57.9919% -62 - C6 -1U78 - TC3A_CAEEL A:[2-104] -------------------------------------------------------------PRGSAL--S--D--T--ER---AQ-LDVM--K-LL--N--V-S-----LHEMSRKISR-----------S-----R-H---------CIRVYLKD-PVSYGTSKRAP---RR-----KA--LSVRDE-RNVIRAASN-S-CK-------TARDIRNELQLSASKRTILNVIKRSG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 SP3 53.5414% -45 - C6 -1KNG - CYCY_BRADU A:[50-193] ---------------------------------------------------RPAPQTALPPLEGLQA--D--N--V--QV---PGLDPAA--F-KG-----K-VSLVNVWASWCVPCHD-----------E-----A-P---------LLTELGKD-KR------------FQLVGINYK--DAADNA-RRFLGRYGN-P-FG-------RVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEKAL-------------------------------------------------------------------------------------------------------------------------------------------
29 SP3 50.8416% -22 - C6 -1XFL - TRXH1_ARATH A:[1-114] -------------------------------------------------------MASEEGQVIACH--T--V--E--TW---NEQLQKA--N-ES--K--T-LVVVDFTASWCGPCRF-----------I-----A-P---------FFADLAKKLPN------------VL-----FLK-VDTDEL-KSVASDWAIQA-MP-------TFMFLKEGKILDKVVGAKKDELQSTIAKHLA--------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 Fugue 50.1114% -53 - C5 -3FBI - MED31_YEAST B:[19-110] ----------------------------------------------------------------QNP--L--P--T--RF---EVELEFI--Q-SL--A--N-I-----QYVTYLLTQQ-----------Q-----I-WKSPNFKNYLKYLEYWCN-PP------------YS-----QC--IVYPNC-LFILKLLNG-FMES-------AIVNEDGLLEGLDELP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 SP3 45.4811% -56 * C6 *1F9M - TRXF_SPIOL A:[10-121] --------------------------------------------------------MEAIVGKVTEV--N--K--D--TF------WPIV--KAAG--D--K-PVVLDMFTQWCGPCKA-----------M-----A-P---------KYEKLAEEYLDVI----------FL-----KL--DCNQEN-KTLAKELGI-RVVP-------TFKILKENSVVGEVTGAKYDKLLEAIQAARS--------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 SP3 45.4013% -40 - C6 -1PS6 PDXA_ECOLI A:[1-328] VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQ--T--A--G--TLTLLPVALRAP--V-TA--G--Q-L-----AVENGHYVVE-----------T-----L-A---------RACDGCLN-GE------------FA-----AL--ITGPVH-KGVINDAGI-P-FT-------GHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ
21 Fugue 44.2617% -57 - C6 -1S6D - 2SS8_HELAN A:[1-103] --------------------------------------PYGRGRTESGCYQQMEEAEMLNHCGMYLM--K--N--L--GE---RSQVSPR--M-RE--E--D-H-----KQLCCMQLKNL----------D-----E-K---------CMCPAIMM-M-------------LN-----EP--MWIRMR-DQVMSMAHN-L-PI-------ECNLMSQPCQM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


User Run . : Multi Template Modeling Result:

(2 SA) .........10........20........30........40........50........60.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VTCSPTELSSCVGAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLKKFVNSPNARKVASTCGTPIPKC
40 96.73100%-109 - C- -M040 - A:[1-87] VTCSPTELSSCVGAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLKKFVNSPNARKVASTCGTPIPKC
38 94.53100% -96 - C- -M038 - A:[1-80] VTCSPTELSSCVGAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLKKFVNSPNARKVASTCGTPIPKC