@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : H_NR1H2_LXRb: (2015-05-07 )
MSSPTTSSLDTPLPGNGPPQPGAPSSSPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDWVIPDPEEEPERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE

Atome Classification :

(22 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSSPTTSSLDTPLPGNGPPQPGAPSSSPTVKEEGPEPWPGGPDPDVPGTDEASSACSTDWVIPDPEEEPERKRKKGPAPKMLGHELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQIRKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
10 PsiBlast_PDB 75.9197%-119 - C6 -3L0E NR1H2_HUMAN A:[11-253] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLTAAQELMIQQLVAAQLQSNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETESITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMSSLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLADAALPPLLSEIWDVHE
31 PsiBlast_CBE 75.64100%-116 - C6 -1PQ6 NR1H2_HUMAN B:[12-252] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVH-
30 PsiBlast_CBE 75.42100%-130 - C6 -1PQ6 NR1H2_HUMAN D:[12-252] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSFS---KVTPWPL--------ARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRL---KLPPLLSEIWDVH-
4 PsiBlast_PDB 75.35100%-123 - C6 -1PQ6 NR1H2_HUMAN A:[12-252] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRS----PKVTPWP-----QSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVH-
33 PsiBlast_CBE 74.7998%-120 - C6 -4DK8 NR1H2_HUMAN C:[5-245] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLTAAQELMIQQLVAAQLQCNKR-----PKVTPWPL-------DARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDV--
7 PsiBlast_PDB 74.69100%-118 - C6 -3KFC NR1H2_HUMAN A:[12-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLG------DARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
23 PsiBlast_CBE 74.68100%-117 - C6 -3KFC NR1H2_HUMAN B:[11-250] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWP--------DARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
8 PsiBlast_PDB 74.6899%-113 - C6 -1P8D NR1H2_HUMAN A:[7-250] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPL----QSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
32 PsiBlast_CBE 74.6599%-112 - C6 -1P8D NR1H2_HUMAN B:[7-248] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGA---SRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDV--
22 PsiBlast_CBE 74.62100%-115 - C6 -3KFC NR1H2_HUMAN D:[12-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLG------DARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
6 PsiBlast_PDB 74.57100%-118 - C6 -1PQC NR1H2_HUMAN A:[12-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWP-------RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
29 PsiBlast_CBE 74.55100%-112 - C6 -1PQ9 NR1H2_HUMAN B:[11-250] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADP--RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
25 PsiBlast_CBE 74.52100%-118 - C6 -1PQC NR1H2_HUMAN C:[12-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSF----KVTPWPL----QSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
24 PsiBlast_CBE 74.49100%-129 - C6 -1PQC NR1H2_HUMAN D:[12-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRS------VTPW-------SRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITF---FTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALR----KLPPLLSEIWD---
11 PsiBlast_PDB 74.4896%-120 - C6 -4DK7 NR1H2_HUMAN A:[3-245] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMQLTAAQELMIQQLVAAQLQCNKRSFS---KVTPWPL-----SRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDV--
26 PsiBlast_CBE 74.42100%-112 - C6 -1PQC NR1H2_HUMAN B:[11-250] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWPLGADP--RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
2 PsiBlast_PDB 74.32100%-122 - C6 -1UPV NR1H2_HUMAN A:[15-257] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLTAAQELMIQQLVAAQLQ-----------VTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
28 PsiBlast_CBE 74.29100%-115 - C6 -1PQ9 NR1H2_HUMAN C:[12-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSF----KVTPWPL----QSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
9 PsiBlast_PDB 74.2898%-117 - C6 -4DK8 NR1H2_HUMAN A:[4-244] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQLTAAQELMIQQLVAAQLQCNKRSFS---KVTPWP-----QSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---
27 PsiBlast_CBE 74.13100%-130 - C6 -1PQ9 NR1H2_HUMAN D:[12-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRS------VTPW-------SRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITF---FTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALR----KLPPLLSEIWD---
3 PsiBlast_PDB 73.76100%-117 - C6 -1UPW NR1H2_HUMAN A:[15-257] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLTAAQELMIQQLVAAQLQ-----------VTPWPLGADPQSRDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
5 PsiBlast_PDB 73.60100%-117 - C6 -1PQ9 NR1H2_HUMAN A:[12-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTAAQELMIQQLVAAQLQCNKRSFSDQPKVTPWP-------RDARQQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQLRFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWD---