@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : H_NR1A2_THRb: (2016-04-07 )
MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQTTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEPTDEEWELIKTVTEAHVATNAQGSHWKQKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210..----------------------------.....220.......230-.......240.......250.......260-...-----....270.......280.......290.......300.......310.......320.......330.......340......-.350.......360.......370.......380.......390.......400.......410....--...420.......430.......440.......450.......460
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTPNSMTENGLTAWDKPKHCPDREHDWKLVGMSEACLHRKSHSERRSTLKNEQSSPHLIQTTWTSSIFHLDHDDVNDQSVSSAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEENREKRRREELQKSIGHKPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAPIVNAPEGG-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
2 PsiBlast_PDB 89.03100%-130 - C2 -1XZX THB_HUMAN X:[22-280] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EELQKSIGHKPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIG-------------VD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFE-
4 PsiBlast_PDB 88.7699%-133 - C2 -1NQ0 THB_HUMAN A:[4-263] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EELQKSIGHKPEP----------------------------TDEEWELIKTVTEAHVAT-NTQGSHWKQKRKFLPEDIGQ-----------KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
22 PsiBlast_CBE 88.53100%-140 - C2 -1N46 THB_HUMAN B:[8-258] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEP----------------------------TDEEWELIKTVTEAHVAT-NAQ---WKQKRKFLPEDIGQA----------KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
8 PsiBlast_PDB 88.53100%-134 - C2 -1Q4X THB_HUMAN A:[1-253] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GHKPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLP--------------G-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
3 PsiBlast_PDB 88.47100%-129 - C2 -1Y0X THB_HUMAN X:[22-280] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EELQKSIGHKPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIG-------------VD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFE-
6 PsiBlast_PDB 88.4199%-126 - C2 -1NQ2 THB_HUMAN A:[5-263] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EELQKSIGHKPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQA--------G-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRTAVRYEPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFE-
12 PsiBlast_PDB 88.0299%-131 - C2 -2PIN THB_HUMAN A:[2-252] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HKPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAP------GG-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFRLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFE-
5 PsiBlast_PDB 87.9899%-128 - C2 -1NQ1 THB_HUMAN A:[4-263] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EELQKSIGHKPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKQKFLPDDIGQ-----------KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
13 PsiBlast_PDB 87.8999%-133 - C2 -3D57 THB_HUMAN A:[16-266] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HKPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAP------GG-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFRLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFE-
10 PsiBlast_PDB 87.60100%-130 - C2 -1NAX THB_HUMAN A:[3-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAPIVNAPEGG-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFE-
23 PsiBlast_CBE 87.1599%-129 - C2 -2PIN THB_HUMAN B:[3-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAPIVNAPEGG-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFRLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFE-
7 PsiBlast_PDB 87.05100%-128 - C2 -1N46 THB_HUMAN A:[8-258] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEP----------------------------TDEEWELIKTVTEAHVAT-NAQ---WKQKRKFLPEDIGQAPIVNAPEGG-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
197 Fugue 86.54100%-131 - C2 -1BSX THB_HUMAN A:[10-260] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAP---------KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
1 PsiBlast_PDB 86.54100%-131 - C2 -1BSX THB_HUMAN A:[10-260] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAP---------KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
21 PsiBlast_CBE 86.31100%-131 - C2 -1BSX THB_HUMAN B:[10-260] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAP---------KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
14 PsiBlast_PDB 86.3185%-122 - C2 -3UVV THA_CHICK A:[4-262] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EMIKSLQHRPSP----------------------------SAEEWELIHVVTEAHRST-NAQGSHWKQKRKFLPEDI--------PD-D-KVD-----LEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGV-VSDAIFDLGKSLSAFNLDDTEVALLQAVLLMSSDRTGLICVDKIEKCQETYLLAFEHYINYRKHNIPH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
9 PsiBlast_PDB 84.1999% -72 - C- -2J4A THB_HUMAN A:[3-253] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPEP----------------------------TDEEWELIKTVTEAHVAT-NAQGSHWKQKRKFLPEDIGQAPIVNAPEGG-KVD-----LEAFSHFTKIITPAITRVVDFAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVTRGQLKNGGLGV-VSDAIFDLGMSLSSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTH--FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
199 Fugue 77.5332%-106 - C2 -4NQA NR1H2_HUMAN I:[5-389] ---------------------------------------------------------------------------------------------KGPAPKMLGH-ELCRVCGDKASGFHYNVLSCEGCKGFFRRSVVRGGARRYACRGGGTCQMDAFMRRKCQQCRLRKCKEAGMREQCVLSEEQI--RKKKIRKQQQQESQSQSQSPVGPQGSSSSASGPGASPGGSEAGSQGSGEGEGVQLTAAQELMIQQLVAAQLQC-NKR--SFSDQPKVTPWPLGADP-----QSR-DAR-----QQRFAHFTELAIISVQEIVDFAKQVPGFLQLGREDQIALLKASTIEIMLLETARRYNHETECITFLKDFTYSKDDFHRAGLQVEFINPIFEFSRAMRRLGLDDAEYALLIAINIFSADRPNVQEPGRVEALQQPYVEALLSYTRIKRPQDQL--RFPRMLMKLVSLRTLSSVHSEQVFALRLQDKK--LPPLLSEIWDV
198 Fugue 70.7827%-115 - C2 -1SKX NR1I2_HUMAN A:[25-313] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L----------------------------TEEQRMMIRELMDAQMKTFDTTFSHFKNFR---LPGVKVSLQLRGEDGS-VWNYKPPIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWEC-GRLSYCLELL---------LEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHP--FATPLMQELFGI
36 PsiBlast_CBE 66.8434%-110 - C2 -3A9E RARA_HUMAN B:[29-263] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPEVGELIEKVRKAHQET-FPALCQ-----------LGKYTTNNSSEQRVSLD-----IDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGP-LTDLVFAFANQLLPLEMDDAETGLLSAICLICGDRQDLEQPDRVDMLQEPLLEALKVYVRKRRPSRPH--MFPKMLMKITDLRSISAKGAERVITLKMEIPGSM-PPLIQEMLE-