@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Wbm0107: (2015-11-28 )
MAHIPVLLKEMLLQLSPQNGGIYVDATFGAGGYSKAILESADCKVYAIDRDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGERHSRRIARAIVNARKKKTIKTTFELANIVRSVVFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS

Atome Classification :

(20 SA) ---------------------......-.-..10.------.......20........30---------........--40.--.--.......-50........60...------..--...70....-----....80.....--...90........100.......110.......120...--------....130.-......140.......--150......-.-160..--.....170......-----.180.......190.-..----.....200....--------...210....--...220.-----.-...---..230.......240..-------------------.....250.......260.--......270.......280.......290.......300...-----....310----.........320.......330.-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------------------MAHIPV-L-LKEML------LQLSPQNGGIYVDATFGAG---------GYSKAILE--S-A--D--CKVYAID-RDKTVIKFYEDLNIK------YP--SRVKLFIEK-----FSNIRSILDSN--SLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPS--------NTVDGVVF-DIGVSSMQLDDGDRGF--SFLHDGPLD-M-RMDNS--SHTNASTFVNALRE-----EEIANTIYNYGGE-R-HS----RRIARAIVNARK--------KKTIKTTFEL--ANIVRSV-----V-FRG---KSKIDPATRTFQAIRIW-------------------VNDELGELEKGIKAASEIL--NKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNK-----KMIKA------SAEEVNANPRSRSAKLRAIQRLS-
22 HHSearch 95.9842% -86 - C6 -1M6Y RSMH_THEMA A:[8-296] ---------------------QRHIPV-M-VREVI------EFLKPEDEKIILDCTVGEG---------GHSRAILE--H-C--PG-CRIIGID-VDSEVLRIAEEKLKE------FS--DRVSLFKVS-----YREADFLLKTL--G-------------------------------------I--------EKVDGILM-DLGVSTYQLKGENRGF--TFEREEPLD-M-RMDLE--SEVTAQKVLNELPE-----EELARIIFEYGEE-KRFA----RRIARKIVENR-----------PLNTTLDL--VKAVREA-----L-PSYEIRRRKRHFATKTFQAIRIY-------------------VNRELENLKEFLKKAEDLL--NPGGRIVVISFHSLEDRIVKETFRNSK--------KLRILTE-----KPVRP------SEEEIRENPRARSGRLRAAERI--
23 HHSearch 95.1943% -91 - C6 -1WG8 RSMH_THET8 A:[4-283] ---------------------MTHVPV-L-YQEAL------DLLAVRPGGVYVDATLGGA---------GHARGILE--R----G--GRVIGLD-QDPEAVARAKGLHL-----------PGLTVVQGN-----FRHLKRHLAAL--G----------------------------------V-----------ERVDGILA-DLGVSSFHLDDPSRGF--SYQKEGPLD-M-RMGLE--G-PTAKEVVNRLPL-----EALARLLRELGEE-P-QA----YRIARAIVAARE--------KAPIETTTQL--AEIVRKA-----V-GFR----RAGHPARKTFQALRIY-------------------VNDELNALKEFLEQAAEVL--APGGRLVVIAFHSLEDRVVKRFLRESG---------LKVLTK-----KPLVP------SEKEAAQNPRARSAKLRAAEKEA-
21 HHSearch 94.9840% -85 * C6 *3TKA RSMH_ECOLI A:[42-346] ------------------------TTV-L-LDEAV------NGLNIRPDGIYIDGTFGRG---------GHSRLILS--Q-LG-EE-GRLLAID-RDPQAIAVAKTIDD-----------PRFSIIHGP-----FSALGEYVAER--D----------------------------------L--I--------GKIDGILL-DLGVSSPQLDDAERGF--SFMRDGPLD-M-RMDPT--RGQSAAEWLQTAEE-----ADIAWVLKTYGEE-R-FA----KRIARAIVERNR--------EQPMTRTKEL--AEVVAAA-----T-PVK-------HPATRTFQAVRIW-------------------VNSELEEIEQALKSSLNVL--APGGRLSIISFHSLEDRIVKRFMRENSRG-------RQLRAL-----GKLMP------GEEEVAENPRARSSVLRIAERTN-
3 PsiBlast_PDB 93.5736% -89 - C6 -1M6Y RSMH_THEMA A:[10-296] -----------------------HIPV-M-VREVI------EFLKPEDEKIILDCTVGEG---------GHSRAILE--H-C--PG-CRIIGID-VDSEVLRIAEEKLKE------FS--DRVSLFKVS-----YREADFLLKT----------------------LGIEK-------------------------VDGILM-DLGVSTYQLKGENRGF--TFEREEPLD-M-RMDLE--SEVTAQKVLNELPE-----EELARIIFEYGEEKR-FA----RRIARKIVENR-----------PLNTTLDL--VKAVREALPSYEI-RRR---KRHF--ATKTFQAIRIY-------------------VNRELENLKEFLKKAEDLL--NPGGRIVVISFHSLEDRIVKETFR--------NSKKLRILTE-----KPVRP------SEEEIRENPRARSGRLRAAERI--
4 PsiBlast_PDB 93.3336% -87 - C6 -1N2X RSMH_THEMA A:[10-296] -----------------------HIPV-M-VREVI------EFLKPEDEKIILDCTVGEG---------GHSRAILE--H-C--PG-CRIIGID-VDSEVLRIAEEKLKE------FS--DRVSLFKVS-----YREADFLLKT----------------------LGIEK-------------------------VDGILM-DLGVSTYQLKGENRGF--TFEREEPLD-M-RMDLE--SEVTAQKVLNELPE-----EELARIIFEYGEEKR-FA----RRIARKIVENR-----------PLNTTLDL--VKAVREALPSYEI-RRR---KRHF--ATKTFQAIRIY-------------------VNRELENLKEFLKKAEDLL--NPGGRIVVISFHSLEDRIVKETFR--------NSKKLRILTE-----KPVRP------SEEEIRENPRARSGRLRAAERI--
2 PsiBlast_PDB 92.9535% -89 - C6 -3TKA RSMH_ECOLI A:[42-344] ------------------------TTV-L-LDEAV------NGLNIRPDGIYIDGTFGRG---------GHSRLILSQLG-E--E--GRLLAID-RDPQAIAVAKTID---------D--PRFSIIHGP-----FSALG----------EYVAERDLIGK------------------------------------IDGILL-DLGVSSPQLDDAERGF--SFMRDGPLD-M-RMDPT--RGQSAAEWLQTAEE-----ADIAWVLKTYGEE-R-FA----KRIARAIVERNR--------EQPMTRTKEL--AEVVAAA-----T-PVK-------HPATRTFQAVRIW-------------------VNSELEEIEQALKSSLNVL--APGGRLSIISFHSLEDRIVKRFMRENSRG------------------RQLRALGKLMPGEEEVAENPRARSSVLRIAERTN-
19 PsiBlast_CBE 92.7239% -90 - C6 -1WG8 RSMH_THET8 B:[5-282] ----------------------THVPV-L-YQEAL------DLLAVRPGGVYVDATLGGA---------GHARGILE--R-G-----GRVIGLD-QDPEAVARAKGLHLP------GL--TVVQ-----------GNFRHL-----------------------------KRHL----AALGV-----------ERVDGILA-DLGVSSFHLDDPSRGF--SYQKEGPLD-M-RMGLE--GPT-AKEVVNRLPL-----EALARLLRELGEE-P-QA----YRIARAIVAARE--------KAPIETTTQL--AEIVRKA-----VGFRR---AG--HPARKTFQALRIY-------------------VNDELNALKEFLEQAAEVL--APGGRLVVIAFHSLEDRVVKRFL------RESGLKV---LTK-----KPLVP------SEKEAAQNPRARSAKLRAAEKEA-
1 PsiBlast_PDB 90.5139% -84 - C6 -1WG8 RSMH_THET8 A:[4-282] ---------------------MTHVPV-L-YQEAL------DLLAVRPGGVYVDATLGGA---------GHARGILE--R-G-----GRVIGLD-QDPEAVARAKGLHLP------GL--TVVQ-----------GNFRHL-----------------------------KRHL----AALGV-----------ERVDGILA-DLGVSSFHLDDPSRGF--SYQKEGPLD-M-RMGLE--GPT-AKEVVNRLPL-----EALARLLRELGEE-P-QA----YRIARAIVAARE--------KAPIETTTQL--AEIVRKA-----VGFRR---AG--HPARKTFQALRIY-------------------VNDELNALKEFLEQAAEVL--APGGRLVVIAFHSLEDRVVKRFL------RESGLKV---LTK-----KPLVP------SEKEAAQNPRARSAKLRAAEKEA-
41 Fugue 89.7439% -70 - C6 -1M6Y RSMH_THEMA A:[4-296] -----------------RKYSQRHIPVMV--REVI------EFLKPEDEKIILDCTVGEG---------GHSRAILE--HCP--G--CRIIGID-VDSEVLRIAEEKLKE------FS--DRVSLFKVS-----YREADFLLKTL--GIEK----------------------------------------------VDGILMDLGVSTYQLKGENRGF--TFEREEPLDMRMDLESE----VTAQKVLNELPE-----EELARIIFEYGEEKR-FA----RRIARKIVENRP--------LNTTLDLVKA--VREALPS-----Y-EIR---RRKRHFATKTFQAIRIY-------------------VNRELENLKEFLKKAEDLL--NPGGRIVVISFHSLEDRIVKETFRNS--------KKLRILTE-----KPVRP------SEEEIRENPRARSGRLRAAERI--
42 Fugue 58.5422% -68 - C6 -4PON - ? A:[7-197] ---------------------MILKKI-LPYSKEL------LKMAAGEGDIVIDATMGNG---------HDTQFLAE--L-VGEN--GHVYAFDIQESAVANTKERLGEA------YQ--ARTTLFHKS-----HDKIAKSLPPE--T-------------------------------------H--------GKVAAAVF-NLGNGSSTIKAIEQLL--SIMKDEGLI-V-LVVYH--GN-DVLDFCRNLDQ-----QAARVLTYGFINQ-Q-ND----PPFIVAIEKKAQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 45.7631% -68 - C6 -4PON - ? A:[7-82] --------------------------M-I-LKKILPYSKELLKMAAGEGDIVIDATMGNG---------HDTQFLAELVG-E--N--GHVYAFDIQESAVANTKERLGEA------YQ--ARTTLFHKS-----HDKIAKSLPPE--THGKVAAAVFNLGNGSSTIKAIEQLLSIMKDEGLIVLVV--------YHGNDVLD-FCRNLDQQAARVLTYG--FINQQNDPP-F-IVAIE--KKAQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40 HHSearch 45.1422% -55 - C6 -3EEY ? A:[20-86] ---------------------------------------------VKEGDTVVDATCGNG---------NDTAFLAS--L-VG-EN-GRVFGFD-IQDKAIANTTKKLTD------LNLIDRVTLIKDG-----HQNMDKYIDCP--VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG--------GIITVVIY-YGGDTGFEEKEKVLEF--LKGVDQKKF-I-VQRTD--FINQANCPPILVCI-----EKISEGHHHHHH---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43 Fugue 45.0818% -28 - C4 -4O7O MAK1_MYCTU A:[6-454] TLATKLPWSDWLSRQRWYAGRNRELAT-V-KPGVV------VALRHNLDLVLVDVTYTDGATERYQVLVGWDKAAIG--V-A--DD-RTGFDAL-YDVAGPQFLLSLIVSSAVCGTST--GEVTFTREPDVELPFAAQPRVCDAEQSNTSVIFDRRAILKVFRRVSSGINPDIELNRVLTRAGNPHVARLLGAYQFGDALAY-ALGMVTEYEANAAEGW--AMATASVRD-L-FAEGDLYAHEVGGDFAGESYRLGEAVASVHATLADSLGT-A-QATFPVDRMLARLSSTVAVVPELREYAPTIEQQFQKLAAEAITVQ-----R-VHG---DLHLGQVLRTPESWLLIDFEGEPGQPLDERRAPDSPLRDVAGVLRSFEYAAYGPLVDQATDKQLAARAREWVERNRAAFCDGYAVASGIDPRDSALLLGAYELDKAVYE------TGYETRHRPGWLPIPLRSIARLTA
20 PsiBlast_CBE 44.1231% -65 - C6 -4POO ? B:[6-82] -------------------------PM-I-LKKILPYSKELLKMAAGEGDIVIDATMGNG---------HDTQFLAELVG-E--N--GHVYAFDIQESAVANTKERLGEA------YQ--ARTTLFHKS-----HDKIAKSLPPE--THGKVAAAVFNLGSSTIKAIEQLLSIMKDEGLIVLVVYN--------DVLDFCRN-LDQQAARVLTYGFINQ--QNDPPFIVA-I-EKKA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 43.609% -77 - C6 -1DL5 PIMT_THEMA A:[59-138] -----------------------SQPS-L-MALFM------EWVGLDKGMRVLEIGGGTG---------YNAAVMSR--V-V--GEKGLVVSVE-YSRKICEIAKRNVER------LGI-ENVIFVCGD-----GYYGVPEFSPY--DVIFVTVGVDEVPETWFTQLKEGGRVIVPINLKLSRRQP--------AFLFKKKD-PYLVGNYKLETRFITA--GGNLGNLLE-R-NRKLL--REFPFNREILLVRS-----HIFVELVDLLTRR-L-TE----IDGTFYYAGPNG--------VVEFLDDRMR--IYGDAPE-----I-ENL---LTQWESCGYRSFEYLML-------------------HVGYNAFSHISCSI-----------------------------------------------------------------------------------------
7 PsiBlast_PDB 43.5431% -69 - C6 -4POO ? A:[12-82] ---------------------------------ILPYSKELLKMAAGEGDIVIDATMGNG---------HDTQFLAELVG-E--N--GHVYAFDIQESAVANTKERLGEA------YQ--ARTTLFHKS-----HDKIAKSLPPE--THGKVAAAVFNLGYLPGGDITTNGSSTIKAIEQLLSIMK--------DEGLIVLV-VYHEGKAEKNDVLDFC--RNLDQQAAR-V-LTYGF--INQQNDPPFIVAIE-----KKA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 HHSearch 43.2727% -55 - C6 -2YXL ? A:[254-322] ------------------------------------------VLDPKPGETVVDLAAAPG---------GKTTHLAE--L-M--KNKGKIYAFD-VDKMRMKRLKDFVKR------MGI-KIVKPLVKD-----ARKAPEIIGEE--VADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQ--------RELLESAA-RLVKPGGRLLYTTCSI--FKEENEKNI-R-WFLNV--HPEFKLVPLKSPYD-----PGFLEGTMRAWPH-R-HS----TIGFFYALLEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 Fugue 42.6713% -28 - C6 -3EEY ? A:[3-197] ---------------------LTIKNS-LGQSHDY------IKMFVKEGDTVVDATCGNG---------NDTAFLAS--L-VGEN--GRVFGFD-IQDKAIANTTKKLTDLN----LI--DRVTLIKDG-----HQNMDKYIDCP--VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG--------GIITVVIY-YGGDTGFEEKEKVLEFLKGVDQKKFIV-Q-RTDFI--NQANCPPILVCIEK-----ISEGHHHHHH-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 42.1516% -45 - C6 -2PWY TRMI_THET2 A:[81-160] ------------------------YPK-D-ASAMV------TLLDLAPGMRVLEAGTGSG---------GLTLFLAR--A-V--GEKGLVESYE-ARPHHLAQAERNVRA------FWQVENVRFHLGK-----LEEAELEEAAY--DGVALDLMEPWKVLEKAALALKPDRFLVAYLPNITQVLE--------LVRAAEAH-PFRLERVLEVGWREWE--VRLPVAHPR-F-QQVGH--TAFLVALRRWKGS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 41.3613% -47 - C6 -3AJD TRM4_METJA A:[78-147] ------------------------------------------VLNPREDDFILDMCAAPG---------GKTTHLAQ--L-MK-NK-GTIVAVE-ISKTRTKALKSNINR------MGV-LNTIIINAD-----MRKYKDYLLKN--EIFFDKILLDAPCSEEDIKYCSLRQKELIDIGIDLLKKD--------GELVYSTC-SMEVEENEEVIKYILQ--KRNDVELII-I-KANEF--KGINIKEGYIKGTL-----RVFPPNEPFFIAK-L-RK----I----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------