@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Wbm0338: (2015-11-30 )
MGIKFLNPVTPSSRGTVLVSKIGLSRGKPEKSLAFGKKSSGGRNNNGRITIRHKGGGHKKKYRIIDFKRNRNDQGVVEKIEYDPNRSGFLALVSYKCDDTKSYILAPQGIKPGDIVMSGSGIDILPGNCLPLKGIPIGSFVHGVELKPGSGAVIARAAGCYAQVVGRDGNYVLLRLRSGQVRLVLSSCKATIGVVSNPDRKNRKLGKAGRSRWLGVRPTVRGVAMNPVDHPHGGGEGKTSGGRHPVTPWGVATKGKKTRKKNKFSDKYIKQLKG

Atome Classification :

(20 SA) --------------------------.........10........20.......-.30........40........50....--....60........70----...--.-..---...80.......-----.90........100.......110.-.-.-..-..120.....---------------..130.......140.......150.......160.......170......-------------------------.180.-......190.......200----.......210.......220.......230.......240.-......250-........------.260.......270..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------------------------MGIKFLNPVTPSSRGTVLVSKIGLSRGK-PEKSLAFGKKSSGGRNNNGRITIRHKG--GGHKKKYRIIDFKRN-----RND--Q-GV---VEKIEYDPNRSG-----FLALVSYKCDDTKSYILAPQGIKPG-D-I-VM-SGSGIDILPG---------------NCLPLKGIPIGSFVHGVELKPGSGAVIARAAGCYAQVVGRDGNYVLLRLRS-------------------------GQVRL-VLSSCKATIGVVSNPDRKN----RKLGKAGRSRWLGVRPTVRGVAMNPVDHPHGGGEGKTSGGR-HPVTPWG---VATKGKKT------RKKNKFSDKYIKQLKG
15 PsiBlast_PDB 90.9752%-114 - C2 -487D - RL2_ECOLI I:[1-135] -----------------------------------------------------------------------------------------QYRIIDFKRD-----KDGI-P-GR---VATIEYDPNRSA-----NIALINY-ADGEKRYIIAPKNLKVG-M-E-IM-SGPDADIKIG---------------NALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLAS-------------------------GEVRM-ILGKCRATVGEV---------------------------------------------------------------------------------------------
9 PsiBlast_PDB 89.5253% -50 - C2 -3J3W - RL2_BACSU C:[1-270] --------------------------MAIKKYKPTSNGRRGMTTSDFAEITTDK-PEKSLLAPLHKKGGRNNQGKLTVRHQG--GGHKRQYRVIDFKRD-----KDGI-P-GR---VATVEYDPNRSA-----NIALINY-ADGEKRYILAPKGIQVG-T-E-IM-SGPEADIKVG---------------NALPLINIPVGTVVHNIELKPGKGGQLVRSAGTSAQVLGKEGKYVLVRLNS-------------------------GEVRM-ILSACRASIGQVGNEQHEL----INIGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGRAPIGRKSPMSPWG---KPTLGFKT------RKKKNKSDKFIVRRRK
11 PsiBlast_PDB 88.6755% -49 - C2 -4U67 - ? A:[13-270] --------------------------------------RRQMTTADFSGLTKKR-PEKALTEALPKTGGRNNRGRITSRFIG--GGHKRLYRIIDFKR------RDK--S-GVNAKVAAIEYDPNRSA-----RIALLHY-ADGEKRYILAPEGLTVG-A-T-VN-AGPEAEPKLG---------------NALPLRFVPVGAVVHALELVPGKGAQLARSAGTSVQVQGKESDYVIVRLPS-------------------------GELRR-VHSECYATIGAVGNAEHKN----IVLGKAGRSRWLGRKPHQRGSAMNPVDHPHGGGEGRTGAGR-VPVTPWG---KPTKGLKT------RRKRKTSDRFIVT---
12 PsiBlast_PDB 88.5954% -63 - C2 -2ZJQ - RL2_DEIRA A:[33-270] -----------------------------------------------------------LTEALPKTGGRNNRGRITSRFIG--GGHKRLYRIIDFKR------RDK--S-GVNAKVAAIEYDPNRSA-----RIALLHY-ADGEKRYILAPEGLTVG-A-T-VN-AGPEAEPKLG---------------NALPLRFVPVGAVVHALELVPGKGAQLARSAGTSVQVQGKESDYVIVRLPS-------------------------GELRR-VHSECYATIGAVGNAEHKN----IVLGKAGRSRWLGRKPHQRGSAMNPVDHPHGGGEGRTGAGR-VPVTPWG---KPTKGLKT------RRKRKTSDRFIVT---
1 PsiBlast_PDB 88.4858% -60 - C2 -3J8G - ? C:[2-267] ---------------------------AVVKCKPTSPGRRHVVKVVNPELHKGK-PFAPLLEKNSKSGGRNNNGRITTRHIG--GGHKQAYRIVDFKRN-----KDGI-P-AV---VERLEYDPNRSA-----NIALVLYK-DGERRYILAPKGLKAG-D-Q-IQ-SGVDAAIKPG---------------NTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRS-------------------------GEMRK-VEADCRATLGEVGNAEHML----RVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GK-HPVTPWG---VQTKGKKT------R-SNKRTDKFIVRRRS
3 PsiBlast_PDB 83.9460% -44 - C2 -2J28 - RL2_ECOLI C:[5-264] ---------------------------------PTSPGRRHVVKVVNPELHKGK-PFAPLLEKNSKSGGRNNNGRITTRHIG--GGHKQAYRIVDFKRN-----KDGI-P-AV---VERLEYDPNRSA-----NIALVLYK-DGERRYILAPKGLKAG-D-Q-IQ-SGVDAAIKPG---------------NTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRS-------------------------GEMRK-VEADCRATLGEVGNAEHML----RVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GK-HPVTPWG---VQTKGKKT------R-SNKRTDKFIVRR--
2 PsiBlast_PDB 82.5858% -48 - C2 -5AKA - RL2_ECOLI C:[3-266] -----------------------------VKCKPTSPGRRHVVKVVNPELHKGK-PFAPLLEKNSKSGGRNNNGRITTRHIG--GGHKQAYRIVDFKRN-----KDGI-P-AV---VERLEYDPNRSA-----NIALVLYK-DGERRYILAPKGLKAG-D-Q-IQ-SGVDAAIKPG---------------NTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRS-------------------------GEMRK-VEADCRATLGEVGNAEHML----RVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GK-HPVTPWG---VQTKGKKT------R-SNKRTDKFIVRR--
14 PsiBlast_PDB 78.5652% -97 - C2 -1C04 - RL2_HALMA A:[60-194] -----------------------------------------------------------------------------------------QYRIIDFKRD-----KDGI-P-GR---VATIEYDPNRSA-----NIALINY-ADGEKRYIIAPKNLKVG-M-E-IM-SGPDADIKIG---------------NALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLAS-------------------------GEVRM-ILGKCRATVGEV---------------------------------------------------------------------------------------------
13 PsiBlast_PDB 76.4752% -96 - C2 -1RL2 - RL2_GEOSE A:[60-195] -----------------------------------------------------------------------------------------QYRIIDFKRD-----KDGI-P-GR---VATIEYDPNRSA-----NIALINY-ADGEKRYIIAPKNLKVG-M-E-IM-SGPDADIKIG---------------NALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLAS-------------------------GEVRM-ILGKCRATVGEVG--------------------------------------------------------------------------------------------
34 HHSearch 75.4954% -92 * C2 *1RL2 - RL2_GEOSE A:[60-195] -----------------------------------------------------------------------------------------QYRIIDFKRD-----KDG--IPGR---VATIEYDPNRSA-----NIALINYA-DGEKRYIIAPKNLKVG-M-E-IM-SGPDADIKIG---------------NALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLAS-------------------------GEVRM-ILGKCRATVGEVG--------------------------------------------------------------------------------------------
23 Fugue 75.2254%-101 - C2 -1RL2 - RL2_GEOSE A:[60-195] -----------------------------------------------------------------------------------------QYRIIDFKRD-----KD-GIP-GR---VATIEYDPNRSA-----NIALINYA-DGEKRYIIAPKNLKVG----MEIMSGPDADIKIG---------------NALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLAS-------------------------GEV-RMILGKCRATVGEVG--------------------------------------------------------------------------------------------
27 Fugue 71.9140%-100 - C2 -1RL2 - RL2_GEOSE A:[60-125] ---------------------------------------------------------------------------------------QYRIIDFKRDKD--------GIP-GR---VATIEYDPNRSA-----NIALINYA-DGEKRYIIAPKNLKVG--ME-I-MSGPDADIKIG---------------NALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLAS-------------------------GEVRM-ILGKCRATVGEVG--------------------------------------------------------------------------------------------
10 PsiBlast_PDB 70.8155% 94 - C- -1NKW - RL2_DEIRA A:[4-270] -----------------------------KKYRPYTPSRRQMTTADFSGLTKKR-PEKALTEALPKTGGRNNRGRITSRFIG--GGHKRLYRIIDFKR------RDK--S-GVNAKVAAIEYDPNRSA-----RIALLHY-ADGEKRYILAPEGLTVG-A-T-VN-AGPEAEPKLG---------------NALPLRFVPVGAVVHALELVPGKGAQLARSAGTSVQVQGKESDYVIVRLPS-------------------------GELRR-VHSECYATIGAVGNAEHKN----IVLGKAGRSRWLGRKPHQRGSAMNPVDHPHGGGEGRTGAGR-VPVTPWG---KPTKGLKT------RRKRKTSDRFIVTR--
25 Fugue 70.1250% -60 - C2 -1RL2 - RL2_GEOSE A:[60-125] -----------------------------------------------------------------------------------------QYRIIDFKRD-----KDGI-P-GR---VATIEYDPNRSA-----NIALINYA-DGEKRYIIAPKNLKVGME-IMSG-PDADIKIGNA---------------LPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGE-------------------------VRMIL-GKCRATVGEVG----------------------------------------------------------------------------------------------
4 PsiBlast_PDB 69.8160% 98 - C- -2RDO - RL2_ECOLI C:[7-266] ---------------------------------PTSPGRRHVVKVVNPELHKGK-PFAPLLEKNSKSGGRNNNGRITTRHIG--GGHKQAYRIVDFKRN-----KDGI-P-AV---VERLEYDPNRSA-----NIALVLYK-DGERRYILAPKGLKAG-D-Q-IQ-SGVDAAIKPG---------------NTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRS-------------------------GEMRK-VEADCRATLGEVGNAEHML----RVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GK-HPVTPWG---VQTKGKKT------R-SNKRTDKFIVRR--
5 PsiBlast_PDB 69.1960% 33 - C2 -4CSU - RL2_ECOLI C:[7-266] ---------------------------------PTSPGRRHVVKVVNPELHKGK-PFAPLLEKNSKSGGRNNNGRITTRHIG--GGHKQAYRIVDFKRN-----KDGI-P-AV---VERLEYDPNRSA-----NIALVLYK-DGERRYILAPKGLKAG-D-Q-IQ-SGVDAAIKPG---------------NTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRS-------------------------GEMRK-VEADCRATLGEVGNAEHML----RVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GK-HPVTPWG---VQTKGKKT------R-SNKRTDKFIVRRRS
7 PsiBlast_PDB 68.4060% 26 - C2 -4UY8 - RL2_ECOLI C:[7-266] ---------------------------------PTSPGRRHVVKVVNPELHKGK-PFAPLLEKNSKSGGRNNNGRITTRHIG--GGHKQAYRIVDFKRN-----KDGI-P-AV---VERLEYDPNRSA-----NIALVLYK-DGERRYILAPKGLKAG-D-Q-IQ-SGVDAAIKPG---------------NTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRS-------------------------GEMRK-VEADCRATLGEVGNAEHML----RVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GK-HPVTPWG---VQTKGKKT------R-SNKRTDKFIVRRRS
29 Fugue 67.6016% -11 - C3 -1NA6 - T2E2_ECOLX A:[4-398] SVFHNWLLEIACENYFVYIKRLSANDTGATQVGLYIPSGIVEKLFPSINHTRELNPSVFLTAHVSSHDCPDSEARAIYYNSAHFGKTRNEKRITRWGRGSPLQDPEN--T-GA---LTLLAFKLDEQGGDCKEVNIWVCASTDEEDVIETAIGEVIPG-A-L-IS--GPAGQILGGLSLQQAPVNHKYILPEDWHLRFPSGSEIIQYAASHYDPDEQLLDRRRVEYDIFLLVEELHVLDIIRKGFGSVDEFIALANSVSNRRKSRAGKSLEL-HLEHLFIEHGLRHFATQAPDFLFPSAGAYHPLRMLAVKTTCKDRWRQILNHLFTLQEGVSLAQY-REMRESGVRLVVPSSLHKKYPEAVRAELMTLGAFIAELTG
6 PsiBlast_PDB 65.1960% 40 - C2 -3J5L - RL2_ECOLI C:[7-266] ---------------------------------PTSPGRRHVVKVVNPELHKGK-PFAPLLEKNSKSGGRNNNGRITTRHIG--GGHKQAYRIVDFKRN-----KDGI-P-AV---VERLEYDPNRSA-----NIALVLYK-DGERRYILAPKGLKAG-D-Q-IQ-SGVDAAIKPG---------------NTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRS-------------------------GEMRK-VEADCRATLGEVGNAEHML----RVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNF-GK-HPVTPWG---VQTKGKKT------R-SNKRTDKFIVRRRS
38 HHSearch 64.4710% -73 - C2 -1O9Y - HRCQB_PSESH A:[20-78] --------------------------------------------------------------------------------------------------------------------------------------------------TLRCGELRLTLA-E-L-R-------RLDAG---------------TILEVTGISPGHATLCHGEQVVAEGELVDVEGRLGLQITRLV-------------------------------------------------------------------------------------------------------------------------------------------------