@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA0004: (2016-03-11 )
MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQSRLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALSLNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK

Atome Classification :

(20 SA) ----.........10...--------.....20-...-......30........40........50........60.....--------...70.....---------------...80........90--------.-.......100---.-----------------........110......---.120..-------.....130.......140.......150.......160.......170.......180.......190...------------....200.......210.......-220-.......230.......240.......-----250.......260.......270.....-----------..280--------------.........290.......300...-------..----..310.......320.......330...-.--...--340.......350..--....-.360...----....370----------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----MKLNTLQLENYRNY--------DEVTLK--CHP-DVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNAD--------YAKIEGELSY---------------RHGTMPLTMFITKKG--------K-QVKVNHLE-----Q-----------------SRLTQYIGHLNVVLFAP---EDLNIV-------KGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDK------------RAHFIQELESLAKPIHAGITNDKE-ALS-LNYLPSLKFDYAQNEAARLEEIMSILS-----DNMQREKERGISLFGPHRDDISFDVNGM-----------DAQ----------------TYGSQGQQRTTALSIKLAEIELMNI-------EV----GEYPILLLDDVLSELDDSRQTHLLSTIQ-H--KVQ--TFVTTTSVDGIDHEI--MNNA-KLYRINQ----GEIIK------------
31 Fugue 90.3428% -55 - C3 -2O5V RECF_DEIRA A:[2-359] --GDVRLSALSTLNYRNL--------APGTLN--FPE-GVTGIYGENGAGKTNLLEAAYLALTGQTDA-PRIEQLIQAGET--------EAYVRADLQQ---------------GGSLSIQEVGLGRGR--------R-QLKVDGVR-----A-----------------R--TGDLPRGGAVWIRP---EDSELV-------FGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRG------GEEWAMHVWDDVLLKLGTEIMLF------------RRRALTRLDELAREANAQL-GSRK-TLA-LTLTEST----------SPETYAADLR-----GRRAEELARGSTVTGPHRDDLLLTLGDF-----------PAS----------------DYASRGEGRTVALALRRAELELLRE-------KF----GEDPVLLLDDFTAELDPHRRQYLLDLAA-S--VPQ--AIVTGTELAPGAALTLRAQAG-RFTPVAD----EEMQAEGTA--------
41 HHSearch 90.0029% -60 - C3 -2O5V RECF_DEIRA A:[4-346] ----VRLSALSTLNYRNL--------APGTLN--FPE-GVTGIYGENGAGKTNLLEAAYLALTGQTDAP-RIEQLIQAGET--------EAYVRADLQQ---------------GGSLSIQEVGLGRGR--------R-QLKVDGVR-----A------------------RTGDL-PRGGAVWIRP---EDSELV-------FGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRGG------EEWAMHVWDDVLLKLGTEIMLF------------RRRALTRLDELAREANAQLGSR-K-TLA-LTLTESTSPE----------TYAADLR-----GRRAEELARGSTVTGPHRDDLLLTLGDF-----------PAS----------------DYASRGEGRTVALALRRAELELLRE-------KF----GEDPVLLLDDFTAELDPHRRQYLLDLAA-S--VPQ--AIVTGTELAPG------AAL---TLRAQA----GRFT-------------
1 PsiBlast_PDB 85.5230% -53 - C3 -2O5V RECF_DEIRA A:[4-330] ----VRLSALSTLNYRNL--------APGTLN--FPE-GVTGIYGENGAGKTNLLEAAY-LALTGQTDAPRIEQLIQAGET--------EAYVRADLQ----------------QGGSLSIQEVGLGRG--------RRQLKVDGVR-----A-----------------R--TGDLPRGGAVWIRP---EDSELV-------FGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRGGE------------------EWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREANAQLGSRKTLALT-LTESTSPETYAADLRGRRAEELA-----------------RGSTVTGPHRDDLLLTLGDF-----------PAS----------------DYASRGEGRTVALALRRAELELLRE-------KF----GEDPVLLLDDFTAELDPHRRQYLLDLAA-S--VPQ--AIVTGTEL------------------------------------------
34 Fugue 60.7918% -38 - C3 -1E69 - ? A:[1-1164] ----MRLKKLYLKGFKSFG-------RPSLIG--FSD-RVTAIVGPNGSGKSNIIDAI-KWVFGEKFDMIFAGSENLPPAG--------SAYVELVFEE---------------NGEEITVARELKRTG--------E-NTYYLNGS-----P-----------------VRLKDIRDRFAGTGLGV---DFYSIV-------GQGQIDRIV----------------------------------------------------------------------------------------------------------------NAYQRVNESFNRFISLLF-----FGGEGRLEISIRKPGRRDQKLSL-------------------------------------LSGGEKALVGLALLFALME------------I----KPSPFYVLDEVDSPLDDYNAERFKRLLK-ENSKHT--QFIVITH----NKIV--MEAADLLHGVTMVNGVSAIVPVEV---------
32 Fugue 53.3713% -18 - C3 -3EUJ MUKB_HAEDU A:[3-483] MIARGKFRSLTLINWNGF--------FARTFD--FDE-LVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTS--------SSRDKGLYGKLKAGVCYAVLETVNSRAQRIITGVRLQQIAGRDKKVDIR-PFSLQNVPMTDSVI-----------------SLFTEQVANKARVLSLN---DLKEKFEETAVTFKPYHSITDYHSFMFDLGILPKRLRSSSDRNKFYKLIEASLYGGI--SSVITKSLRDYLLPENSGVRQAFQD------------AESVANILRKTIQREQNRILQLNQ-GLQNIAFGQVKGVRLVVNIRDTHSILLNALSDQSFSEALAMLYKRIGEELLDYRNYLDLEVETLRGAYGWMRAESSAL----------------STGEAIGTGMSILLMVVQSWEEESR-------RMRAKDILPCRLLFLDQAARLDAMSINTLFELCERL--DMQ--LLIAAP--ENISPER--GTTY-KLVRKIL----ANQEYVHVVGLKGFG--
35 Fugue 48.6113% -34 - C3 -4UX3 SMC3_YEAST A:[3-527] -----YIKRVIIKGFKTY--------RNETIIDNFSP-HQNVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGLIHQGSGGSVMSASVEIVIRRTV---------------GLKKDDYQLNDRNVT--------K-GDIVRMLE-----TAGFSMNNPYNIVPQGKIVALTNAKDKERLQLLEDVVGAKSFEV-------KLKASLKKMEETEQKKIQINKEMGELNSKLSEMEQERKELEKYNELERNRKIYQFTLYDRELNEVINQMET------------SDQLLQRLNDMNTEISGLKNVNKR-AFE-NFKKFNERRKDLAERASELDESKDSIQ-----DLIVKLKQQKVNAVDSTFQKVSENFEAV-----------FERLVPRGTAKLIIHSISVSFNSKQNEQLHVEQLSGGQKTVCAIALILAIQMV----DPASFYLFDEIDAALDKQYRTAVATLLK-E--LSKNAQFICTTFRTDMLQVA--DKFF-RVKYENK----ISTVIEVNREEAIGFIR
38 Fugue 46.0815% -26 * C3 *1G6H LIVG_METJA A:[4-257] -----TMEILRTENIVKYFGEFKALD-GVSIS--VNKGDVTLIIGPNGSGKSTLINVITGFLKAD--------------------------------EG---------------RVYFEN----KDITN--------K-----------------------------------------------------EPAEL-------YHYG-IVRTFQTPQPLK-EMTVLENLLIGEICPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKL-SHLY------------D-------------------------RK-AGELS-------GGQMKLVEIGRALMT-----N------PKMIVMDEP--------IAGV-----------A----------------------------PGLAHDIFNHVLELK-------AK-----GITFLIIEHRLDIVLNY--IDHLYVMF-----NG--QIIAEGRGEEEIKNV--LSDP-KVVEIYI----GE---------------
26 PsiBlast_CBE 45.8032% 22 - C3 -3QKT ? C:[1-43] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 45.3032% 35 - C3 -3QKU ? A:[1-43] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 45.2532% 32 - C3 -1US8 - RAD50_PYRFU A:[1-61] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 45.0832% 24 - C3 -4NCJ ? B:[1-71] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 44.9532% 23 - C3 -3QKR ? A:[1-43] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 44.9332% 15 - C3 -4NCJ ? C:[1-62] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 44.3332% 39 - C3 -1F2T - RAD50_PYRFU A:[1-47] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 44.3225% 18 - C3 -3AUX RAD50_METJA A:[3-69] ----MILKEIRMNNFKSH--------VNSRIK--FEK-GIVAIIGENGSGKSSIFEAVF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 43.9532% 24 - C3 -4NCK ? B:[1-73] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 43.9332% 30 - C3 -3QKS - RAD50_PYRFU A:[1-43] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 HHSearch 43.7728% -4 - C3 -3QKT RAD50_PYRFU A:[1-50] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAILVGLYWP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 43.7332% 22 - C3 -3QKT ? B:[1-63] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 PsiBlast_CBE 43.5532% 20 - C3 -3QKU ? B:[1-101] ----MKLERVTVKNFRSH--------SDTVVE--FKE-GINLIIGQNGSGKSSLLDAI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------