@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA0058: (2016-03-11 )
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSIYEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA

Atome Classification :

(20 SA) -------------------------.......-..10-----.---...----.----...20..---......30.-...--....40.-.-.-....-.50........60....--....70-.........80.........-90....-....100....-------..-------.-------110----------------------------.........120--.......130.......140.......--150-......---..160.......170.......180..--.....190.......200.......210.......220.......230........240.......250.......260--........270.......280.----......290..-...-----..300-------------------------.......310.......320.......330.......340.......350....-------...360.......370.......380.......390..-.....400..-.....410.......420.......430.......440.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------MKQVIGY-LRQS-----T---MKQ----Q----SLAAQKQ---AIEAIAEKH-HIQ--HINFYSD-K-Q-SGRK-DNRSGYRQMTQLIQQGQ--CDILC--CYRLNRLHRN-LKNALKLIK-LCQTYH-VHILSVHDGYF-------DM-------D-------Q------------------------------AFDRFKLNIFIS--LAELESDNIGEQVRNGLQEKAKQGRLI--TT--HAPFGY---EYHNGAFIINQNESPTVKAVFNYYIKG--HGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDN-MFPSIVSTSIYEQAQRLRSQKQIKQTSSDNQ---LKQKIKCPCCNTTLTNMTVRKK----NHTLRYYVCPK-NMN-----ASRFV-------------------------CDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQ-------EQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQ-IQHTIQNIIQ-KRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA
17 HHSearch 75.8526% -83 - C4 -1GDT TNR1_ECOLI A:[1-182] --------------------------MRLFGY-ARVS-----T---SQQ---------SLDIQVR---ALKD----A-GVK--ANRIFTD-K-A-SGSS-SDRKGLDLLRMKVEEG----DVIL--VKKLDRLGRD-TADMIQLIK-EFDAQG-VSIRFIDDG-I-------ST-------D-------G------------------------------EMGKMVVTILSA--VAQAERQRILERTNEGRQEAMAKGVVF--G---RKR-------------KIDRD------AVLNMWQQG--LGASHISKTMN-------IARSTVYKVINES------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 74.7428% -96 - C4 -3GUV - ? A:[5-155] -------------------------KIKVYLY-TRVS-----T---SIQIEG-Y----SLEAQKS---RMKAFAIYN-DYE--IVGEYEDAG-K-SGKSIEGRIQFNRMMEDIKSGKDGVSFVL--VFKLSRFARN-AADVLSTLQ-IMQDYG-VNLICVEDG-I-------DS-------S-------K------------------------------D--KLMISVLSA--VAEIERENIRIQTMEGCIQKARE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 73.9726% -78 - C4 -1GDT TNR1_ECOLI A:[2-168] ---------------------------RLFGY-ARVS-----T----SQ----Q----SLDIQVR---ALKDAGVKA-N------RIFTD-K-A-SGSS-SDRKGLDLLRMKVEEG----DVIL--VKKLDRLGRD-TADMIQLIK-EFDAQG-VSIRFIDDG-I-------ST-------D-------G------------------------------EMGKMVVTILSA--VAQAERQRILERTNEGRQEAMAKG----------VVFGR---KRK-----IDRD------AVLNMWQQG--LGASHISKTM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 71.7725% -76 - C4 -1ZR4 TNR1_ECOLI A:[3-168] ----------------------------LFGY-ARVS-----T----SQ----Q----SLDIQVR---ALKDAGVKA-N------RIFTD-K-A-SGSS-SDRKGLDLLRMKVKEG----DVIL--VKKLDRLGRD-TADMIQLIK-EFDAQG-VSIRFIDDG-I-------ST-------D-------S------------------------------YIGKMVVTILSA--VAQAERQRILQRTNEGRQEAMAKG----------VVFGR---KRK-----IDRD------AVLNMWQQG--LGASHISKTM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 Fugue 71.3710% -15 - C4 -4BQQ - ? A:[26-395] ------------------------MDTYAGAY-DRQSRERSAA---SPA----T----QRSANED---KAADLQREV-ERDGGRFRFVGH-F-S-EAPG-AERPEFERILNECRAGR--LNMII--VYDVSRFSRLKVMDAIPIVS-ELLALG-VTIVSTQEGVF-------RQ-------G-------N------------------------------VMDLIHLIMRLD--ASHKESSLKSAKILDTKNLQRELGGYV--GG--KAPYGFELVSETKEITRNGRMVNVVINKLAHSTTPL--TGPFEFEPDVIRWWWREIKTHKP-----------------------------------GSITGLCKRMDADAVPTRGW---DPATVMRILRDPRIAGFAAEVI----YKKKPD--------------------------------------------------------------------------------GTPTTKIEGYRIQRDPIT-------LRPVELDCGPIIEPAEWYELQAWLDGRGRGK----------------------------GLSRGQAILSAMDKLYCECGA---------------
45 Fugue 70.1716% -32 - C5 -4WBD BSHC_BACSU A:[2-541] HMQLTELSIKNQNVFVQHYIDGKEEMSSFFDYSIHHK-----D---MWR----E----RLEDLSSRFFAREELAAYL-TSY--HNKFGSS-A-M-QSAI-EKLKDPSSAAVVGGQ-Q--AGLLTGPLYTIHKIISI-IVLAKQQEK-ELQVPV-IPIFWVAGEDH-------DL-------D-------EINFVHTSEENGPVKKKLPQSYWKKSSAASTSLDQEKCAAWIDDVFAAFEETDHTNTLLDNVKRCLRESVTF--TDFFELLIAD---LFQEEGLVLLNSGDPGIKKLETAMFQKILRENDELARAVSDQQAFMRQAGY--KPIIESGKEQANLFYEYEDERF-LIEKDNGRFVIKELDLGWTRDELHTHMEEHP---ER------FSNNVVTRPLMQEFL---IPTLAFIAGPG-EINYWGELKQAFAVMGFKMPPVMPRLNITILERHIEKKLAERNISLQDAIERGTENQRETYFERQIPEEFTAVMDQAKSQIEAIHKTVRQEALKVDQSLEPLLLKNAAFIQDQLQFLERTVMKRIEEKEGYVLKDYERIQNSIKPLLAPQERIWNIMYYLNRY------GPKFFTTFKNLPFSFQNQHQVVKL-
1 PsiBlast_PDB 69.3227% -85 - C4 -3GUV - ? A:[11-155] -------------------------------Y-TRVS-----TSIQIEG----Y----SLEAQKS---RMKAFAIYN-DYE--IVGEYED-AGK-SGKSIEGRIQFNRMMEDIKSGKDGVSFVL--VFKLSRFARN-AADVLSTLQ-IMQDYG-VNLICVEDG-I-------DS-------S-------K------------------------------D--KLMISVLSA--VAEIERENIRIQTMEGCIQKARE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 69.1225% -75 - C4 -1ZR2 TNR1_ECOLI A:[3-168] ----------------------------LFGY-ARVS-----T----SQ----Q----SLDIQVR---ALKDAGVKA-N------RIFTD-K-A-SGSS-SDRKGLDLLRMKVKEG----DVIL--VKKLDRLGRD-TADMIQLIK-EFDAQG-VSIRFIDDG-I-------ST-------D-------S------------------------------YIGKMVVTILSA--VAQAERQRILQRTNEGRQEAMAKG----------VVFGR---KRK-----IDRD------AVLNMWQQG--LGASHISKTM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 67.5527% -79 - C4 -3BVP - ? A:[3-136] --------------------------KKVAIY-TRVS-----T---TNQAEEGF----SIDEQID---RLTKYAEAM-GWQ--VSDTYTD-AGF-SGAK-LERPAMQRLINDIENKA--FDTVL--VYKLDRLSRS-VRDTLYLVKDVFTKNK-IDFISLNES-I-------DT-------S-------S------------------------------AMGSLFLTILSA--INEFEREL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 67.4626% -81 - C4 -2GM4 TNR1_ECOLI A:[3-168] ----------------------------LFGY-ARVS-----T----SQ----Q----SLDIQVR---ALKDAGVKA-N------RIFTD-K-A-S-----DRKGLDLLRMKVKEG----DVIL--VKKLDRLGRD-TADMIQLIK-EFDAQG-VSIRFIDD-SI-------DT-------S-------S------------------------------AMGRMVVTILSA--VAQAERQRILQRTNEGRQEAMAKG----------VVFGR---KRK-----IDRD------AVLNMWQQG--LGASHISKTM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 65.6426% -73 - C4 -3BVP - ? A:[3-135] --------------------------KKVAIY-TRVS-----T---TNQ----AEEGFSIDEQID---RLTKYAEAM-GWQ--VSDTYTD-A-GFSGAK-LERPAMQRLINDIENKA--FDTVL--VYKLDRLSRS-VRDTLYLVK-DVFTKNKIDFISLNES-I-------DT-------S-------S------------------------------AMGSLFLTILSA--INEFERE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 HHSearch 65.4522% -89 - C4 -3G13 ? A:[6-160] --------------------------LRVAAY-CRVS-----T---DSEDQL-N----SYKSQVQ---YYTDMIKKNKEWV--LADIYADEA--------TKREDFQRMINDCMNGE--IDMVF--TKSISRFARN-TLDTLKYVR-MLKERN-IAVYFEDEK-I-------NT-------L-------T------------------------------MDGELLLVVLSS--VAQQEVENISANVKKGLKMKMKRGELV--GF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 64.6819% -85 - C4 -2R0Q BIN3_STAAU C:[1-200] ---------------------------MIIGY-ARVS-----S---LDQ---------NLERQLE---NLKTFGAE---------KIFTE-K---------NRPILQKALNFVRMG----DRFI--VESIDRLGRN-YNEVIHTVN-YLKDKE-VQLMITSLPMMNEVIGNPLL-------D-------K------------------------------FMKDLIIQILAM--VSEQERNESKRRQAQGIQVAKEKGVYK--G----RPLLY---SPN----AKDPQKRVIYHRVVEMLEEG--QAISKIAKEVN-------ITRQTVYRIKHDNG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 Fugue 62.0715% -63 - C4 -2R0Q BIN3_STAAU C:[1-200] ---------------------------MIIGY-ARVS-----S----LD----Q----NLERQLE---NLKTF-------G--AEKIFTE-K---------NRPILQKALNFVRMG----DRFI--VESIDRLGRN-YNEVIHTVN-YLKDKE-VQLMITSLPMM-------NE-------VIGNPLLDK------------------------------FMKDLIIQILAM--VSEQERNESKRRQAQGIQVAKEKGVYK--GR--PLLYSP---NAKDPQKRVIYHRVVEMLE------EG--QAISKIAKEVNITRQTVYRIKHDNG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40 Fugue 61.2314% -53 - C2 -4KIS ? A:[2-328] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DRMVMGKIKRIEAGLPLTTAK--GRTFGY---DVIDTKLYINEEEAKQLRLIYDIFEEE--QSITFLQKRLKKLG-FKVRTYNRYNNWLTNDLYCGYVSYKDKVHVKGIHEPIISEEQFYRVQEIFSRMGKNPNMNKESASLLNNLVVCSKCGLGFVHRRKDTVSRGKKYHYRYYSCKTYKHT-----HELEK-------------------------CGNKIWRADKLEELIIDRVNNYSFASRNIDKEDESLNEKLKIEHAKKKRLFDLY-------INGSYEVSELDSMMNDIDAQINYYEAQIEANEELKKNK--TVDFNSL-E-FREKQLYLKSLINKIYIDGEQVTIEWLLEHHHHHH----------
3 PsiBlast_PDB 60.5126% -49 - C4 -3UJ3 - GIN_BPMU X:[2-125] ----------------------------LIGY-VRVA-----T---NDQ----N----TDLQRNA---LVCAGCEQ----------IFED-K-L-SGTR-TDRPGLKRALKRLQKG----DTLV--VWKLDRLGRS-MKHLISLVG-ELRERG-INFRSLTDS-I-------DT-------S-------S------------------------------PMGRFFFHVMGA--LAEVERELIIERTMA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 59.7225% -66 - C4 -3UJ3 - GIN_BPMU X:[2-125] ----------------------------LIGY-VRVA-----T---NDQ---------NTDLQRN---ALVCA-----GC----EQIFED-K-L-SGTR-TDRPGLKRALKRLQKG----DTLV--VWKLDRLGRS-MKHLISLVG-ELRERG-INFRSLTDS-I-------DT-------S-------S------------------------------PMGRFFFHVMGA--LAEVERELIIERTMA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 58.7022% -73 - C4 -3PKZ BIN3_STAAU A:[1-124] ---------------------------MIIGY-ARVS-----S---LDQ---------NLERQLE---NLKTFGAE---------KIFTE-K-Q-SGKSIENRPILQKALNFVEMG----DRFI--VESIDRLGRN-YNEVIHTVN-YLKDKE-VQLMITSLPMM-------NEVIGNPLLD-------K------------------------------FMKDLIIRILAM--VSEQE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 58.5427% -38 - C4 -4M6F GIN_BPMU A:[2-136] ----------------------------LIGY-VRVS-----T---NDQ----N----TDLQRNA---LVCAGCEQ----------IFED-K-L-SGTR-TDRPGLKRALKRLQKG----DTLV--VWKLDRLGRS-MKHLISLVG-ELRERG-INFRSLTD-SI-------DT-------S-------S------------------------------PMGRFFFHVMGA--LAEVERELIIERTMAGLAAARNKGRI----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 57.8130% -53 - C4 -1GHT - TNR1_ECOLI A:[2-96] ---------------------------RLFGY-ARVS-----T----SQ----Q----SLDIQVR---ALKDAGVKA-N------RIFTD-K-A-SGSS-SDRKGLDLLRMKVEEG----DVIL--VKKLDRLGRD-TADMIQLIK-EFDAQG-VSIRFIDDG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------