@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SA0072: (2016-03-11 )
MISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQLLSTESSNTGIRMIKHYATLTTTAHILNQSLDLQLNVSSIKNYLLSYHNETVSERSLADKAMDTIVQFIAENLGKFSQQTRLANMIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKLVSDRDRKTTKRNAKDDTGKSTSLVFYQIKIDLDYADVLGLQSQGRDNVIQKHSNPSQFKNTNLEEFMKSENTTLIVF
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....-....10........20........30----.........40....-----....50........60...-----.---.....70..--......80....-....90...---....---.-100......------.110.......120..--.....----------------.130...--.-...140-------.......150.-..---...--.160----...-......-------------170...--....180-.-......190--...---....200....-..-.210--...---------------....220.---....--..230----...-.....-.240.-...----...250.....-..260-........270----.-----...------...280.......---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MISTS-EHSIFKNPAKND
G
L
R
V
R
T
I
E
V
S
E
K
F-----TSSAQ
N
S
D
T
I
K
K
V
V
S-----QNNGH
V
L
P
I
I
A
Q
F
LL-DNT-----
N
---
D
V
T
S
L
F
Q
K
E
--
D
S
V
F
Y
Q
L
LSTES-SNT
G
I
R
M
I
K
---
H
Y
A
T
---
L
-
T
T
T
A
H
I
LNQ------S
L
D
L
Q
L
N
V
S
S
I
K
-
N
Y
L
--
L
S
Y
HN----------------ET
V
S
E
R
S
--
L
-
A
D
K
A
M
D
-------
T
I
V
Q
F
I
A
E
N
L
G
-
K
F
---
S
Q
Q
--
T
R
------
L
A
N
-
M
I
Q
NFG-------------ILSLKD--D
Y
I
E
V
K
I
-
I
-
R
N
V
F
D
K
M
LT--DSQ---F
E
D
T
K
N
V
I
D
A
L-DN-A
G
K
L
--VSD---------------RDRKTTKR---NAKD--DTG------KS
T
-
S
L
V
F
Y
-
Q
I
K
I
D
-L
D
Y
----
A
D
V
LGLQSQGR-
D
N
V
-
I
-
Q
KHS
N
P
S
QFKN----T-----
N
L
E
------
E
F
M
KSEN
T
T
L
I
VF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
79.43
19%
-7
* C7 *
4FDT
2
?
A:
[21-425]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MQT
K
I
Q
K
Y
-
A
G
T
A
M
P
Y
P
N
R
T
D
G
M
T
P
F
Y
I
N
H
L
G
R
H
GARFP
T
S
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K
A
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K
V
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K
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S
-----
A
Q
Q
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G
L
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G
M
A
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L
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I
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R
---
R
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F
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Q
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K
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D
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Y
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D
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N
-------------
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N
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Y
K
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D
-------------
W
L
P
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K
K
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A
L
-
F
S
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A
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P
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TSIPLNLEDLFT
L
D
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W
H
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Y
W
Q
T
Q
---
N
L
R
Q
--
Y
M
S
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K
S
S
-
A
P
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K
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M
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A
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I
A
W
----
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RPDSVSVYWKDYEISPMA
A
N
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NE
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PISTACFPYYS
W
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K
T
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F
F
N
Q
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A
K
K
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L
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N-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
70.08
15%
-23
- C5 -
4TXA
2
RC3H1_MOUSE
A:
[6-399]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PQWTDFLSCPICT
Q
T
F
D
ETIR
K
P
I
S
L
GC
G
H
T
V
C
-
K
M
C
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QNPQQ
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Q
L
L
Y
R
A
SCFKVTKRDS
S
L
M
Q
L
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F
R
T
Y
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A
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L
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R
R
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L
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H
K
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S
F
-
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GDP
A
N
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A
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I
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G
L
V
A
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T
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V
H
G
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Y
I
Q
NHS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
Fugue
67.79
18%
5
- C6 -
4QPV
-
?
A:
[17-290]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
V
P
E
E
M
E
A
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K
Y
V
G
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-----
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--
V
G
T
V
L
----------------
S
G
F
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A
--
H
--
K
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D
-------
N
L
T
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V
L
K
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Y
K
S
-
K
Y
---
K
Y
T
GY
T
E
------
N
A
I
M
K
T
Q
N
S
G
----------------
F
R
N
--
E
Y
Y
Y
L
T
A
-
I
-
P
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T
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D
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Y
K
R
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Q
P
L
---
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-
S
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K
Q
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---------------
K
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P
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N
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K
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K
E
V
I
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F
NHE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
Fugue
64.27
18%
-4
- C3 -
4M5D
14
UTP22_YEAST
A:
[81-1237]
T
A
T
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S
Y
D
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R
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F
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Y
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SFALKAGIYQPN
G
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KELFEKKDFLNF
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P
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S
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MKLPLSVK
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SAFRYTSLCQPVPFAYSDPDF
F
Q
D
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ETSPKWPDE
I
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V
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Y
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T
ER
D
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I
L
Y
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A
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K
P
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L
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LLLGHIT
D
E
L
A
E
L
I
A
I
K
PFVDPAPYFIPGS
L
E
N
G
F
L
K
V
L
K
F
I
S
Q
WNWKD
D
P
L
I
L
DLVKPEERLT
L
A
Q
Y
K
G
I
Q
M
N
F
T
N
L
R
N
SDPNGTHLQFFVASKNDPSGILYSSGIP
L
P
I
A
T
R
L
T
A
L
A
K
V
A
V
N
L
L
Q
T
HGLN
Q
Q
T
I
N
L
L
F
TPGLKDYD
F
V
V
D
L
R
T
PIGLKSSCGILSAPSNFPENLNDLSEKMD
P
T
Y
Q
L
V
K
Y
L
N
L
K
Y
KN
S
L
I
L
S
S
R
KYIGVNGGEKGD
K
N
V
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T
G
L
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G
A
H
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FRVNLDCNVKPVDDENVILN
K
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H
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A
A
F
G
NDMVI
N
F
E
T
D
2
PsiBlast_PDB
63.11
23%
9
- C9 -
1D8V
-
RIP3_MOMCH
A:
[76-236]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
-----
R
---
D
V
S
Y
F
F
K
E
S
--
P
P
E
A
Y
N
I
L
F
K
G
T
-
R
K
I
T
L
P
Y
T
G
---
N
Y
E
N
---
L
-
Q
T
A
A
H
K
I
R
E
------
N
I
D
L
G
L
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A
L
S
S
A
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I
T
T
--
L
F
Y
Y
N
----------------
A
-----
Q
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S
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A
P
S
A
L
L
-------
V
L
I
Q
T
T
A
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A
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A
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R
F
---
K
Y
I
--
E
R
H
V
A
K
Y
V
A
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N
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F
K
P
N
L
A
-------------
I
I
S
L
E
N
--
Q
W
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A
L
S
----
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---
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A
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F
Q
V
T
N
---------------
V
D
S
D
V
V
K
G
---
N
I
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
61.46
23%
8
- C9 -
1CF5
-
RIP3_MOMCH
A:
[76-236]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
-----
R
---
D
V
S
Y
F
F
K
E
S
--
P
P
E
A
Y
N
I
L
F
K
G
T
-
R
K
I
T
L
P
Y
T
G
---
N
Y
E
N
---
L
-
Q
T
A
A
H
K
I
R
E
------
N
I
D
L
G
L
P
A
L
S
S
A
-
I
T
T
--
L
F
Y
Y
N
----------------
A
Q
S
--------
A
P
S
A
L
L
-------
V
L
I
Q
T
T
A
E
-
A
A
-
R
F
---
K
Y
I
--
E
R
H
V
A
K
Y
V
A
T
N
-
F
K
P
N
L
A
-------------
I
I
S
L
E
N
--
Q
W
S
A
L
S
----
K
Q
I
F
---
L
A
--
Q
N
Q
---
G
G
K
F
R
N
P
V
D
L
I
-
K
P
-
T
G
Q
R
F
Q
V
T
N
---------------
V
D
S
D
V
V
K
G
---
N
I
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
Fugue
56.31
15%
-16
- C7 -
4OO2
1
?
A:
[18-527]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TRPLT
G
E
E
Y
L
E
S
L
RDA
R
E
V
Y
L
DGSRVKDVTAHPAF
H
N
P
A
R
M
T
A
R
L
Y
D
S
L
H
DPAQKAVLTAPTDAGDGFTHRFFTAPRS
V
D
D
L
V
K
D
Q
A
A
I
A
S
W
A
R
K
S
YGWMGRSPDYKA
S
F
L
G
T
LGANADFYEPF
A
D
N
A
R
R
W
Y
R
E
S
Q
E
K
V
L
Y
W
-
N
H
A
F
L
H
P
P
V
D
R
S
E
V
G
D
V
F
I
H
V
E
R
E
T
-----
D
A
G
L
V
V
S
G
A
K
V
V
A
T
G
-----
S
A
L
T
H
-
A
A
F
I
S
H
W
G
L
-
P
I
K
-----
D
---
R
K
F
A
-------------
L
V
A
T
V
P
M
D
A
D
G
L
K
V
I
C
R
PS
Y
S
A
N
---
A
-
A
T
T
G
S
P
F
D
N
------
P
L
S
S
R
L
D
E
N
----
D
A
I
--
L
V
L
D
Q
----------------
V
L
I
P
W
E
N
--
V
-
F
V
Y
G
N
L
-------
G
K
V
H
L
L
A
G
Q
S
G
M
I
-----------------
E
R
A
-
T
F
H
G
C
T
-------------
R
L
A
V
K
L
--
E
F
I
A
-
G
L
-
L
-
A
K
A
L
D
-
I
T
G
--
A
K
D
---
F
R
G
V
Q
T
R
L
G
E
V
-
L
A
-
W
R
N
L
--
F
W
S
---------------
L
S
D
A
A
A
R
N
---
P
V
P
W
--
K
N
G
T
L
L
P
N
P
Q
A
G
M
A
Y
R
W
F
M
Q
I
-----
G
Y
----
P
R
V
L
E
I
V
Q
Q
D
V
-
A
S
G
-
L
M
Y
V
N
S
S
T
E
D
F
R
N
PET
G
P
-----
Y
L
E
------
K
Y
L
R
G
S
D
G
A
G
A
V
E
R
V
K
V
M
K
L
L
W
D
A
VGS
D
F
G
G
R
H
E
L
Y
E
R
N
Y
SGN
H
E
N
T
R
I
E
L
L
L
S
Q
T
A
S
G
K
L
D
S
Y
M
D
F
A
Q
A
C
M
D
E
YDLDGWTAPDLESF
H
A
M
R
S
A
S
R
D
L
LGGL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
55.08
19%
-26
- C9 -
4CR2
-
RPN5_YEAST
P:
[107-217]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
------
S
L
D
L
N
T
R
I
S
V
I
E
-
T
I
R
--
V
V
T
E
N
KIFVE
V
E
R
A
R
V
T
K
D
L
V
E
I
K
K
E
E
G
--
K
-
I
D
E
A
A
D
-------
I
L
C
E
L
Q
V
E
T
Y
G
-
S
M
---
E
M
S
--
E
K
------
I
Q
F
-
I
L
E
Q
M
E
-------------
L
S
I
L
K
G
--
D
Y
S
Q
A
T
V
-
L
S
R
K
I
L
K
K
T
F
K
--
N
P
K
---
Y
E
S
L
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
54.91
19%
-19
- C9 -
4CR4
-
RPN5_YEAST
P:
[107-217]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
------
S
L
D
L
N
T
R
I
S
V
I
E
-
T
I
R
--
V
V
T
E
N
KIFVE
V
E
R
A
R
V
T
K
D
L
V
E
I
K
K
E
E
G
--
K
-
I
D
E
A
A
D
-------
I
L
C
E
L
Q
V
E
T
Y
G
-
S
M
---
E
M
S
--
E
K
------
I
Q
F
-
I
L
E
Q
M
E
-------------
L
S
I
L
K
G
--
D
Y
S
Q
A
T
V
-
L
S
R
K
I
L
K
K
T
F
K
--
N
P
K
---
Y
E
S
L
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
54.56
19%
-24
- C9 -
5A5B
-
?
P:
[107-217]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
------
S
L
D
L
N
T
R
I
S
V
I
E
-
T
I
R
--
V
V
T
E
N
KIFVEVERARVTKDLV
E
I
K
K
E
E
G
--
K
-
I
D
E
A
A
D
-------
I
L
C
E
L
Q
V
E
T
Y
G
-
S
M
---
E
M
S
--
E
K
------
I
Q
F
-
I
L
E
Q
M
E
-------------
L
S
I
L
K
G
--
D
Y
S
Q
A
T
V
-
L
S
R
K
I
L
K
K
T
F
K
--
N
P
K
---
Y
E
S
L
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
54.51
19%
-24
- C9 -
4CR3
-
RPN5_YEAST
P:
[107-217]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
------
S
L
D
L
N
T
R
I
S
V
I
E
-
T
I
R
--
V
V
T
E
N
KIFVE
V
E
R
A
R
V
T
K
D
L
V
E
I
K
K
E
E
G
--
K
-
I
D
E
A
A
D
-------
I
L
C
E
L
Q
V
E
T
Y
G
-
S
M
---
E
M
S
--
E
K
------
I
Q
F
-
I
L
E
Q
M
E
-------------
L
S
I
L
K
G
--
D
Y
S
Q
A
T
V
-
L
S
R
K
I
L
K
K
T
F
K
--
N
P
K
---
Y
E
S
L
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
Fugue
50.21
9%
8
- C4 -
3NUQ
6
SDT1_YEAST
A:
[3-282]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
T
V
E
Y
T
A
S
D
L
A
T
Y
Q
N
E
V
N
E
Q
I
A
K
N
-----
K
A
H
L
E
S
L
T
H
P
G
S
K
V
T
-----
F
P
I
D
Q
P
N
L
K
V
F
F
F
D
I
-
D
N
C
LYKSS
T
---
R
I
H
D
L
M
Q
Q
S
--
I
L
R
F
F
Q
T
H
L
K
L
S
-
P
E
D
A
H
V
L
N
N
---
S
Y
Y
K
EYG
L
-
A
I
R
G
L
V
M
F
H
------
K
V
N
-------
A
L
-
E
Y
N
--
R
L
V
D
D
----------------
S
L
P
L
Q
D
I
--
L
K
P
D
I
P
L
R
-------
N
M
L
L
R
L
R
Q
S
-
G
-
K
I
---
D
K
L
--
W
L
------
F
T
N
------------------------------
A
Y
K
N
H
-
A
-
I
R
C
L
R
L
L
G
I
--
A
D
L
---
F
D
---
G
L
T
Y
C
D
-
Y
S
-
R
T
D
T
--
L
V
C
---------------
K
P
H
V
K
A
F
E
---
K
A
M
K
--
E
S
G
LAR---
Y
E
N
-
A
Y
F
I
D
-
D
S
G
K
N
-
I
E
T
----
G
I
K
L
G
M
K
T
C
I
H
L
V
E
N
-
E
-
V
G
Q
T
P
E
G
A
I
V
I
----
S
-----
D
I
L
------
E
L
P
H
V
V
S
D
L
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
44.89
33%
-59
- C9 -
3OJL
1
?
A:
[101-148]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
------
S
C
D
I
S
L
V
M
R
A
L
D
-
S
I
L
PF
L
K
K
G
N
----------------
T
I
I
V
E
S
T
--
I
-
A
P
K
T
M
D
-------
D
F
V
K
P
V
I
E
N
L
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
44.61
33%
-67
- C9 -
3OJO
1
?
A:
[101-157]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
------
S
C
D
I
S
L
V
M
R
A
L
D
-
S
I
L
PF
L
K
K
G
N
----------------
T
I
I
V
E
S
T
--
I
-
A
P
K
T
M
D
-------
D
F
V
K
P
V
I
E
N
L
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
43.20
67%
742
- C2 -
2HJQ
-
YQBF_BACSU
A:
[79-87]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
N
P
S
D
F
K
N
----
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
42.89
23%
-4
- C8 -
3F9V
-
MCM_SULSO
A:
[179-288]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
F
R
L
I
P
E
K
-
T
K
L
--
I
D
W
Q
K
----------------
A
V
I
Q
E
R
P
EE
V
-
P
S
G
Q
L
P
-------
R
Q
L
E
I
I
L
E
D
---
D
L
---
V
D
S
--
A
R
------
P
G
D
-
R
V
K
V
T
G
-------------
I
L
D
I
K
Q
--
D
S
P
V
K
R
G
-
S
-
R
A
V
F
D
I
Y
M
K
--
V
S
S
---
I
E
V
S
Q
K
V
L
D
E
V
-------
I
--
I
S
E
---------------
E
D
E
K
K
I
K
D
---
L
A
K
D
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
42.12
23%
20
* C8 *
4FDG
-
MCM_SULSO
B:
[185-294]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
F
R
L
I
P
E
K
-
T
K
L
--
I
D
W
Q
K
----------------
A
V
I
Q
E
R
P
EE
V
-
P
S
G
Q
L
P
-------
R
Q
L
E
I
I
L
E
D
---
D
L
---
V
D
S
--
A
R
------
P
G
D
-
R
V
K
V
T
G
-------------
I
L
D
I
K
Q
--
D
S
P
V
K
R
G
-
S
-
R
A
V
F
D
I
Y
M
K
--
V
S
S
---
I
E
V
S
Q
K
V
L
D
E
V
-------
I
--
I
S
E
---------------
E
D
E
K
K
I
K
D
---
L
A
K
D
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
39.54
25%
21
- C9 -
2H1O
-
FITA_NEIG1
E:
[6-56]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
R
-
N
L
S
--
E
A
T
H
N
----------------
A
I
K
F
R
A
R
--
A
-
A
G
R
S
T
E
-------
A
E
I
R
L
I
L
D
N
I
A
-
K
A
---
Q
Q
T
--
V
R
------
L
G
S
-
M
L
A
S
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
39.54
25%
21
- C9 -
2BSQ
-
FITA_NEIG1
E:
[6-56]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
R
-
N
L
S
--
E
A
T
H
N
----------------
A
I
K
F
R
A
R
--
A
-
A
G
R
S
T
E
-------
A
E
I
R
L
I
L
D
N
I
A
-
K
A
---
Q
Q
T
--
V
R
------
L
G
S
-
M
L
A
S
I
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
39.00
36%
31
- C9 -
1XR5
-
?
A:
[41-87]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
-------------
V
L
S
D
N
D
--
P
R
L
E
V
K
L
-
T
-
E
S
L
F
S
K
Y
K
G
--
N
V
N
---
T
E
P
T
E
N
M
L
V
A
V
-
D
H
Y
A
G
Q
L
--
L
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------