@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SA0078: (2016-03-11 )
MYKSIYNFQETNTNFLENLESLNDDNYELLNDKELVSDSNELKLISKVYIRKKDKKLLDWQLLIKNVYLDTEEDDNLFSESGHHFDAILFLKEDTTLQNNVYIIPFGQAYHDINNLIDYDFGIDFAERAIKNEDIVNKNVNFFQQNRLKEIVNYRRNSVDYVRPSESYISVQGHPQNPQIFGKTMTCGTSISLRVPNRKQQFIDKISVIIKEINAIINLPQKISEFPRIVTLKDLNKIEVLDTLLLKKLSNSSTTENISIDISRFLELSNMILLLDDMLDVNIYINSFKNNTLETFDATDPEVDYITEIGDYLLKYDVNSINDVRIEVIDNLGHSNNMLLKTILHAEVEMEDGKKYLLQNGKWGYFNREFFDLLNDHLNEIEIRYNTLTPTGLVFKEGEEGYIKEIVGRLPEEYLMLHKKFIKPINKNFIVKGNGIELADLYNIKNKELFTIKRGINTSLSLYSLEQNIIAINALKYPESYNFEELIEAIPDNSENIFNDIQRSTNFSIVWILPISSIDNMPIKDMVHTSNVINKNFQLTNLGSVLLKNKLVEWSLYLKDQRINPIIYMETPTEDRN
Atome Classification :
(20 SA)
--------------------------------------------------------.........10........20........30........40........50........60..------......70........80........90........100..-------.....110...-....---.120.--..----.....130--....-.....140---.......150....-...160.......-170-........180.....--..-190....-....200....-...210.......--220.---......230.......240.....-..250.......260-...--....-.270.......280.....----..290.......300.-......310-------------------------.......320-....-...330.......340.......350-----.......---..--360......-.370..-...-...380..--.....390........400.......410---........420.......430----.......440.......450........460..---.....470.--......-480.......490.-.-----.....500.......510..--.....520-........---530.......540.......550.......----560.....---..570.....------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--------------------------------------------------------MYKSIYNFQETN
T
N
F
L
E
N
L
E
SLNDDN
Y
E
LL
N
D
K
E
LVSDS
N
E
L
K
L
I
S
K
V
Y
I
RKKDKK
L
L
D
W
Q
L
L
------
I
K
N
VYLDTEEDDNLFSESGH
H
F
D
A
I
L
F
L
KEDTTLQN
N
V
Y
I
I
-------PF
G
Q
A
Y
-
H
D
I
N
-
N
L
I
D
---
Y
DF-
G
--
I
D
----
F
A
E
R
AI----KNED-
I
V
NKN
V
N
F
---
F
Q
Q
N
R
L
K
E
I
V
N
Y
RR-NSV
D
Y
VRPSE
S
Y
I
-
S
-V-QGHPQNP
Q
I
F
G
K
TMTC--G
T
-
S
I
-
S
L
RV-P
N
R
K
Q
Q
F
I
D
K
I
-
S
V
I
I
K
E
I
N
A
I
INL--
P
Q
K
I
---
S
EFP
R
I
V
T
LKD
L
N
K
I
E
V
L
D
T
L
L
L
K
-
K
LSNSSTT
E
N
I
S
I
D
--
I
S
R
--
F
L
E
L
-
S
N
M
I
L
LLDD
M
L
D
V
N
I
Y
I
NS----FKNN
T
L
E
TFDATDP
E
V
-
D
Y
I
T
E
I
G
D
Y
-------------------------
L
L
K
YDVNSI
N
-
D
V
R
I
-
E
V
I
D
NLGHSN
N
M
L
L
K
T
I
L
H
A
E
V
E
M-------EDG
K
K
Y
L
---LQ--NGKWGYF
N
R
-
E
F
F
-
D
L
-
L
N
D
-HLN
E
I
E
I
R
--
Y
NTLTP-T
G
L
V
FKEGEE
G
Y
I
K
E
I
V
G
RL
P
----
E
E
Y
L
M
L
H
K
K
F
I
KPINK
N
F
I
V
K----GN
G
I
E
L
A
D
LYNIKN
K
E
L
F
T
-
I
KRGINTS
L
S
L
Y
S
---LEQ
N
I
I
A
I
N
--
A
LKYPE-SY
N
F
E
E
L
I
E
AIPDN-
S
-----
E
N
I
F
N
D
I
Q
RSTN
F
S
I
V
W
I
L
P--ISSIDNM--
P
I
K
D
M
V
H
T
---
S
N
VINKN
F
Q
L
T
N
L
G
S
V
L
L
KNKL
V
E
W
S
L
Y
L
K----DQRI
N
P
I
I
---
Y
M
ETPTEDRN------------------------------
17
PsiBlast_PDB
78.60
24%
-29
- C3 -
3V4R
2
UVRB_BACSU
A:
[86-324]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
---
F
P
N
N
A
V
E
Y
F
V
S
Y
-----
Y
D
Y
Y
Q
P
-
E
A
Y
V
--------
P
Q
T
D
T
F
I
E
K
D
A
S
I
--
N
D
-
E
I
D
K
L
R
H
-
S
A
T
S
A
L
F
E
R
R
D
-
V
I
I
I
A
S
V
S
C
I
Y
G
L
GS
P
E
E
Y
---
R
E
M
--
V
V
S
L
R
--
T
E
M
E
I
E
R
N
E
L
L
R
-
K
L
V
D
I
Q
Y
A
R
N
-
D
I
D
--
F
Q
R
G
T
F
R
V
R
-
G
D
V
V
E
I
F
P
--
R
D
E
H
C
V
R
V
E
----
F
F
G
D
E
I
E
R
I
R
----
E
V
-
D
A
L
T
--
G
E
I
-------------------------
L
G
D
R
D
------
H
V
A
I
-
F
P
A
S
H
F
V
T
R
A
E
K
M
E
K
A
I
Q
N
I
E
K
E
L
-------
E
E
Q
L
K
V
M
---
H
E
--
N
G
K
------------
L
-
L
E
A
-
Q
R
L
E
Q
R
T
R
--
Y
D
L
E
M
M
-
R
E
M
G
F
C
S
G
I
E
N
Y
S
R
H
L
T
L
R
P
P
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
74.95
24%
-31
- C3 -
2D7D
1
UVRB_BACSU
A:
[80-349]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
---
F
P
N
N
A
V
E
Y
F
V
S
Y
-----
Y
D
Y
Y
Q
P
-
E
A
Y
V
--------
P
Q
T
D
T
F
I
E
K
D
A
S
I
--
N
D
-
E
I
D
K
L
R
H
-
S
A
T
S
A
L
F
E
R
R
D
-
V
I
I
I
A
S
V
S
C
I
Y
G
L
GS
P
E
E
Y
---
R
E
M
--
V
V
S
L
R
--
T
E
M
E
I
E
R
N
E
L
L
R
-
K
L
V
D
I
Q
Y
A
R
N
-
D
I
D
--
F
Q
R
G
T
F
R
V
R
-
G
D
V
V
E
I
F
P
A
S
R
D
E
H
C
V
R
V
E
----
F
F
G
D
E
I
E
R
I
R
----
E
V
-
D
A
L
T
--
G
E
I
-------------------------
L
G
D
R
D
------
H
V
A
I
-
F
P
A
S
H
F
V
T
R
A
E
K
M
E
K
A
I
Q
N
I
E
K
E
L
-------
E
E
Q
L
K
V
M
---
H
E
--
N
G
K
------------
L
-
L
E
A
-
Q
R
L
E
Q
R
T
R
--
Y
D
L
E
M
M
-
R
E
M
G
F
C
S
G
I
E
N
Y
S
R
H
L
T
L
R
P
P
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
73.44
24%
-30
- C3 -
2NMV
2
?
A:
[80-349]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
---
F
P
N
N
A
V
E
Y
F
V
S
Y
-----
Y
D
Y
Y
Q
P
-
E
A
Y
V
--------
P
Q
T
D
T
F
I
E
K
D
A
S
I
--
N
D
-
E
I
D
K
L
R
H
-
S
A
T
S
A
L
F
E
R
R
D
-
V
I
I
I
A
S
V
S
C
I
Y
G
L
G
S
P
E
E
Y
---
R
E
M
--
V
V
S
L
R
--
T
E
M
E
I
E
R
N
E
L
L
R
-
K
L
V
D
I
Q
Y
A
R
N
-
D
I
D
--
F
Q
R
G
T
F
R
V
R
-
G
D
V
V
E
I
F
P
A
S
R
D
E
H
C
V
R
V
E
----
F
F
G
D
E
I
E
R
I
R
----
E
V
-
D
A
L
T
--
G
E
I
-------------------------
L
G
D
R
D
------
H
V
A
I
-
F
P
A
S
H
F
V
T
R
A
E
K
M
E
K
A
I
Q
N
I
E
K
E
L
-------
E
E
Q
L
K
V
M
---
H
E
--
N
G
K
------------
L
-
L
E
A
-
Q
R
L
E
Q
R
T
R
--
Y
D
L
E
M
M
-
R
E
M
G
F
C
S
G
I
E
N
Y
S
R
H
L
T
L
R
P
P
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
Fugue
72.61
8%
-5
* C2 *
1L1L
-
RTPR_LACLE
A:
[4-724]
E
I
S
L
S
A
E
F
I
D
R
V
K
A
S
VKPHWGKLG
W
V
T
Y
K
R
T
Y
A
R
W
L
PEKG
R
S
E
N
W
D
E
T
V
K
R
V
V
E
G
N
I
N
L
D
P
R
L
Q
D
S
P
S
L
E
L
K
Q
S
L
T
E
E
A
E
R
L
Y
K
L
I
Y
G
L
G
A
T
P
S
G
R
N
L
W
I
S
G
T
D
Y
Q
R
R
T
G
D
S
L
N
N
C
W
F
V
A
IRPQK
Y
G
D
S
K
I
V
P
S
Y
L
G
K
Q
E
K
A
V
S
M
P
F
S
F
L
F
D
E
L
M
K
G
G
G
V
G
F
S
V
A
R
-------
S
N
I
S
Q
I
-
P
R
V
D
-
F
A
I
D
---
L
Q
L
-
V
--
V
D
ETSE
S
Y
D
A
S
V
----
K
V
G
A
-
V
G
K
N
E
L
V
Q
---
D
A
D
S
I
Y
Y
R
L
P
D
T
R
E
-
G
W
V
L
A
N
A
L
L
I
D
L
H
-
F
-
A
-
Q
T
N
P
D
R
K
Q
K
L
I
L
D
L
S
D
IR
P
Y
-
G
A
-
E
I
H
G
-
F
G
G
T
A
S
G
P
M
P
L
-
I
S
M
L
L
D
V
N
E
V
L
N
N
--
K
A
G
-------
G
R
L
T
A
V
D
A
A
D
I
C
N
L
I
G
K
A
V
V
A
-
G
N
A
E
L
A
L
G
S
N
D
D
Q
D
--
F
I
S
--
M
K
Q
D
-
Q
E
K
L
M
H
H
R
W
A
S
N
N
S
V
A
V
D
S
AFSG
Y
Q
P
I
A
A
G
I
R
E
N
G
E
P
G
I
-
V
N
L
D
L
S
K
N
Y
GRIVDGYQAGIDGDVEGTNPCGEIS
L
A
N
G
E
P
C
N
L
F
-
E
V
F
P
-
L
I
A
E
E
Q
G
W
D
L
Q
E
V
F
A
L
A
A
R
Y
A
K
R
V
T
F
SPYDW
E
I
S
R
E
I
I
---
Q
K
--
N
R
R
I
G
I
S
M
S
-
G
I
Q
-
D
W
-
L
L
T
-
R
L
G
N
R
V
V
T
--
G
F
K
D
D
F
-
D
P
E
T
H
E
A
I
K
V
P
V
Y
D
K
R
A
I
K
M
V
----
D
Q
L
Y
K
A
V
V
K
A
D
Q
D
Y
S
K
T
L
G
C
N
----
E
S
I
K
H
T
T
V
K
P
S
G
T
V
A
K
L
A
G
-
A
S
E
G
M
H
F
H
Y
G
A
Y
L
---
I
Q
R
I
R
F
Q
D
S
DP
L
L
P
A
L
K
-
A
C
G
Y
R
T
E
A
D
I
Y
T
E
N
-
T
-----
T
C
V
E
F
P
I
K
A
V
G
A
D
N
P
N
F
A
S
A
GT
V
S
I
A
E
Q
F
--
A
T
Q
A
F
L
Q
T
YWS
D
N
A
V
S
C
T
I
T
F
Q
D
S
E
G
D
Q
V
E
S
L
L
R
Q
Y
R
F
I
T
K
----
S
T
S
L
L
P
Y
F
GGS
L
Q
Q
A
P
K
E
P
I
D
K
E
T
Y
E
K
R
S
Q
E
I
TGN
V
E
E
V
F
S
Q
L
N
S
D
V
KDLE
31
Fugue
72.25
14%
-14
- C1 -
4BHW
5
EP300_HUMAN
A:
[14-576]
----------------------------------------------------------
K
K
I
F
K
P
E
E
L
R
Q
A
L
M
P
T
L
E
A
L
Y
R
Q
D
P
E
S
L
P
F
R
Q
P
V
D
P
----
Q
L
L
G
I
P
D
Y
F
D
I
V
K
S
P
M
D
L
S
T
I
------
K
R
K
L
D
T
G
Q
Y
Q
E
P
W
Q
Y
V
D
D
I
W
L
M
F
N
N
A
W
L
Y
N
R
K
T
S
R
V
Y
K
Y
C
S
-------
K
L
S
E
V
F
E
Q
E
I
D
-
P
V
M
Q
S
L
G
Y
C
C
-
G
RK
L
E
----
F
S
P
Q
T
L
CCYG
K
Q
L
C
-
T
I
P
R
D
A
T
Y
---
Y
S
Y
Q
N
-----
R
Y
H
F
-
C
E
K
C
F
N
E
I
Q
G
E
S
V
-
S
-
L
-
G
D
D
P
S
Q
P
Q
---
T
T
I
N
K
--
E
Q
-
F
S
-
K
R
K
N
-
D
T
L
D
P
E
L
F
V
E
C
-
T
E
C
G
R
K
M
H
Q
I
C
V
L
--
H
H
E
I
IWP
A
G
F
V
C
D
G
C
L
K
K
S
A
R
T
R
K
E
N
K
F
S
A
K
-
R
L
P
S
T
R
L
G
T
F
L
E
N
R
--
V
N
D
--
F
L
R
R
-
Q
N
----
H
P
E
S
G
E
V
T
V
R
V
V
H
----
A
S
D
K
T
V
E
V
K
P
G
M
K
A
R
F
----
V
D
S
G
E
M
-------------------------
A
E
S
F
P
Y
R
T
K
A
-
L
F
A
F
-
E
E
I
D
G
--------
V
D
L
C
F
F
G
M
H
V
Q
-------
E
Y
G
S
D
C
P
---
P
P
--
N
Q
R
R
V
Y
I
S
Y
L
D
S
V
-
H
F
-
F
R
P
-
K
C
L
R
T
A
V
Y
--
H
E
I
L
I
---
G
Y
L
E
Y
V
K
K
L
G
Y
T
T
G
H
I
W
A
C
P
PSEG
D
D
Y
I
F
H
C
H
P
P
D
Q
K
I
P
K
P
K
R
L
Q
----
E
W
F
K
K
M
L
D
K
A
V
S
E
R
------
I
V
H
D
Y
K
D
-
I
F
K
Q
A
---
T
E
D
R
L
T
S
A
K
--
E
L
P
Y
F
E
-
G
D
F
W
P
N
V
L
E
E
S
I
K
E
-
S
GGSGS
Q
K
L
Y
A
T
M
E
K
H
K
E
V
F
F
V
I
R
L
I
--
A
G
P
A
A
N
S
L
P
P
I
V
D
--
P
D
---
P
L
I
P
C
D
L
M
D
G
R
D
A
F
L
T
L
A
R
D
K
H
L
E
F
S
S
L
R
R
----
A
Q
W
S
T
M
C
M
---
L
V
E
L
H
T
Q
S
Q
D
------------------------------
40
Fugue
66.04
18%
-16
- C2 -
4R7F
7
?
A:
[2-398]
-----------------------------------------------------------
Q
V
K
F
F
T
D
V
N
S
K
Q
I
K
T
L
Q
V
K
V
A
G
-----------------
E
L
I
S
E
P
Y
I
A
L
G
G
E
E
-----------------------------
Q
I
E
I
N
F
D
G
L
-----
G
S
G
Y
T
R
Y
A
Y
N
V
-------
V
H
C
N
A
D
-
W
T
Q
S
-
Q
L
S
P
---
I
E
Y
M
N
---------------------
G
-
F
Q
G
T
T
I
D
D
---
F
A
N
S
----------------
I
G
T
T
T
Q
Y
S
-
N
-
Y
-
R
L
L
L
P
N
D
D
V
---
Q
F
K
V
--
S
G
-
N
Y
-
A
I
Q
V
-
Y
N
E
D
T
P
D
Q
I
I
F
-
T
A
C
F
S
V
V
E
P
V
V
N
I
--
S
A
S
V
---
S
G
N
T
D
I
---------------------
D
T
N
Q
S
H
Q
Q
V
S
F
N
--
I
N
N
-----
K
-
N
F
P
I
T
Y
P
Q
T
D
L
K
I
F
V
Y
Q
D
N
----
R
R
D
N
------------------------------------------------------
A
V
T
-
D
L
Q
P
M
S
I
L
E
N
---------------
Q
I
S
Y
-------
T
Y
N
R
N
L
I
---
F
P
--
A
G
N
E
--
Y
R
R
M
E
F
L
-
S
N
K
Y
N
G
M
H
V
E
N
I
S
F
H
N
P
Y
Y
N
V
E
L
M
T
D
Y
R
R
D
K
G
T
Y
Q
Y
D
Q
D
Q
D
G
R
-----------------------
F
F
I
R
C
S
DC
N
D
P
D
T
E
A
D
Y
Y
I
V
H
----
F
T
-
L
A
C
D
P
L
P
D
G
S
V
Y
L
N
G
E
L
F
N
N
V
L
D
E
K
--
S
----
K
M
G
Y
N
F
E
T
------
K
Q
-
Y
-----
E
K
A
V
L
L
K
Q
G
S
Y
N
Y
Q
Y
L
F
V
P
T
--
G
S
S
V
G
----------
Q
T
---
G
P
I
E
G
N
Y
Y
Q
T
Q
N
-----------
E
Y
S
I
Y
V
Y
Y
R
P
M
G
A
R
Y
D
R
L
I
---
G
V
T
T
V
R
N
---------------------------------
32
Fugue
60.77
12%
-25
- C1 -
4GQA
-
?
A:
[25-412]
--------------------------------------------------------------------------------------------------------------------------------------------------------------
A
R
L
N
I
G
L
I
G
SG
F
M
G
Q
A
H
A
D
A
Y
-
R
R
A
A
M
F
Y
P
D
---
L
P
K
-
R
--
P
H
----
L
Y
A
L
A
D
----
Q
D
Q
A
M
A
E
R
H
A
A
K
L
GAE
K
A
Y
G
D
W
R
E
L
V
N
D
P
Q
V
D
V
V
D
I
T
S
P
N
H
L
H
Y
-
T
M
A
M
A
A
I
A
A
G
K
H
V
Y
C
E
K
P
L
A
--
V
N
-
E
Q
-
Q
A
Q
E
M
A
Q
A
A
R
R
A
G
V
K
T
M
V
A
F
N
N
I
K
T
P
A
A
L
L
--
A
K
Q
I
---
I
A
R
G
D
I
G
E
P
V
R
F
R
G
T
F
D
Q
G
F
Y
N
D
P
-
N
L
P
W
S
W
R
C
S
K
T
L
G
G
--
S
G
A
--
L
G
D
L
G
A
H
T
L
S
V
A
Q
F
L
L
G
G
I
R
E
V
T
A
----
S
A
Q
T
C
L
R
Q
R
P
V
P
D
A
E
W
-
R
E
V
E
N
D
D
Q
V
-------------------------
Q
C
L
V
N
F
D
S
G
A
-
A
G
V
I
-
E
A
S
R
I
A
A
G
R
-----
I
F
G
V
F
W
E
V
S
G
-------
T
E
G
---------------------
T
L
Y
M
D
---
G
E
-
R
F
N
E
L
Q
V
Y
--
R
F
N
--------
D
D
K
H
D
R
G
F
K
T
L
Y
A
G
S
Q
I
----
P
A
Y
A
G
F
F
---------
G
F
D
F
G
----
G
G
G
L
G
Y
F
D
V
K
V
I
E
V
H
D
L
V
Q
G
I
C
G
D
D
D
C
Y
P
N
--------------------
F
E
F
-
G
L
Q
N
Q
R
V
L
S
A
I
E
A
S
M
V
-----
S
R
R
W
V
N
V
V
K
D
---------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
55.78
31%
-17
- C4 -
2ZSK
-
?
A:
[7-103]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
G
G
T
T
P
----
E
S
T
L
Y
Y
Y
K
K
Y
I
E
-
I
S
R
E
K
F
E
K
----
Y
F
Y
P
E
L
I
-
I
Y
S
I
N
F
K
E
F
F
Q
-
N
P
E
G
W
E
G
-----------
R
K
K
I
L
I
N
--
A
A
K
A
L
E
-
R
A
G
-
A
E
L
I
A
F
A
A
N
T
-
P
-----
H
L
V
F
D
D
V
Q
R
E
V
N
V
P
M
V
S
I
I
------------------------------------------------------------------------------------------------------------
33
Fugue
52.28
17%
4
* C1 *
4B4P
10
?
A:
[6-147]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
A
---
Q
V
T
G
T
L
L
G
T
G
K
T
N
T
-
T
Q
M
P
A
L
Y
T
W
Q
H
Q
I
Y
N
-
V
-
N
F
I
P
S
S
S
----
G
T
L
T
C
--
Q
A
G
T
I
-
L
V
W
K
-
N
G
R
E
T
Q
Y
A
L
E
C
-
R
V
S
I
H
H
S
S
G
S
I
N
E
--
S
Q
W
G
---
Q
Q
S
Q
V
G
F
G
T
A
C
G
N
K
K
C
R
F
T
G
F
E
I
S
L
R
I
P
P
N
A
Q
T
Y
P
L
S
G
D
--
L
K
G
--
S
F
S
L
-
T
N
K
----
E
V
N
W
S
A
S
I
Y
V
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
46.05
24%
-24
* C4 *
5BZA
2
?
A:
[215-297]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
V
D
D
L
--
P
A
T
L
---
S
K
--
K
L
I
T
E
V
L
R
E
K
L
N
F
K
G
L
V
L
S
D
-
A
M
E
M
K
A
I
S
E
N
F
S
V
E
E
A
V
R
F
--
F
I
E
A
-
G
G
N
M
I
L
L
D
N
F
R
D
L
P
V
Y
Y
E
S
----
L
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
43.47
28%
48
- C3 -
3FSS
3
RT106_YEAST
A:
[31-100]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
N
V
D
G
S
P
V
I
T
-
L
L
K
G
N
D
R
E
L
S
I
Y
Q
---
L
N
K
N
I
K
M
A
S
--
F
L
P
V
P
E
-
K
P
N
L
I
Y
L
F
M
T
Y
T
S
C
-
E
-----
D
N
K
F
S
E
-------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
39.74
36%
107
- C4 -
2WKG
-
?
A:
[169-215]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
V
G
W
----
A
G
N
R
A
L
P
E
F
N
H
D
N
P
E
V
R
E
Y
I
M
E
I
A
E
Y
-------------------------
W
L
K
F
G
I
D
G
W
R
L
D
V
P
F
-
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
39.21
36%
113
- C4 -
2WCS
-
?
A:
[169-215]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
V
G
W
----
A
G
N
R
A
L
P
E
F
N
H
D
N
P
E
V
R
E
Y
I
M
E
I
A
E
Y
-------------------------
W
L
K
F
G
I
D
G
W
R
L
D
V
P
F
-
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
37.01
36%
111
- C4 -
2WC7
-
?
A:
[169-230]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
V
G
W
----
A
G
N
R
A
L
P
E
F
N
H
D
N
P
E
V
R
E
Y
I
M
E
I
A
E
Y
-------------------------
W
L
K
F
G
I
D
G
W
R
L
D
V
P
F
-
E
I
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
35.64
36%
117
* C6 *
2J04
-
TFC6_YEAST
B:
[418-474]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
L
-
A
D
S
L
I
T
T
F
D
F
L
S
P
T
T
V
V
C
G
----
F
K
N
G
F
V
A
E
F
D
L
T
D
P
E
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
33.24
23%
286
* C3 *
4PN8
-
?
A:
[2-31]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
K
I
E
Q
I
L
Q
K
I
-
E
K
I
L
Q
K
I
E
W
I
L
Q
K
--
I
E
Q
I
---
L
Q
G
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
33.00
28%
115
- C3 -
3TVV
-
RT106_YEAST
A:
[95-165]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
N
V
D
G
S
P
V
I
T
-
L
L
K
G
N
D
R
E
L
S
I
Y
Q
---
L
N
K
N
I
K
M
A
S
--
F
L
P
V
P
E
-
K
P
N
L
I
Y
L
F
M
T
Y
T
S
C
-
E
-----
D
N
K
F
S
E
-------------------------------------------------------------------------------------------------------------------------
30
HHSearch
23.86
13%
171
- C5 -
2GFO
-
A:
[335-378]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
Y
N
L
F
S
V
S
N
H
Y
G
G
L
-------
D
-
G
G
H
Y
T
A
Y
C
K
N
AA
R
Q
R
W
F
K
F
D
D
-
H
E
V
-
S
D
-
I
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
23.35
24%
624
- C6 -
1AVY
-
WAC_BPT4
A:
[464-480]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
-------
D
-
G
Q
A
Y
V
---
R
K
--
D
G
E
W
V
L
L
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
21.78
42%
157
- C5 -
4HET
1
?
A:
[110-146]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
T
-
S
F
N
F
E
E
L
L
---
P
S
N
-
D
-----
Y
D
I
F
Y
E
F
Q
P
G
T
S
Q
E
I
S
K
V
L
Q
--
W
S
S
------------------------------------------------------------------------------------------------------