@TOME V2.3
(Nov 2016)

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA0095: (2016-03-12 )
MKRLNKLVLGISFLFLVISITAGCGMGKEAEIKKSFEKTMSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIVNSQMAIQNKGEPMKSKGMVLYMNRNTRTTNGYYYVNVIKGEDKGKHQDNEKRYPVKMVDNKIILTKEIKDENIKIEIENFKFFVQYGNFKDLENYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYDIPTNKAPKLLLKGTGNLKGSSVGYKDIEFTFVEKKEENIYFSDGLIFKPSEDK

Atome Classification :

(16 SA) ------------------------------------......-...10-.-........20....----.----------...30.-..-....---.40------...-..----...50...-.....---60-------........70....-----------....80........-------90.----.......100---.......-.110.....---------..120.......130....-....140.-....-..150---........160----.......170--.........---180.--------......190---.........200.......210.......220.......---------.----------230.......240..--.....250....----------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------------------------MKRLNK-LVLG--I-SFLFLVISITAGCG----M----------GKEAEI-KK-SFEK---TMS------MYP-IK----NLEDLYDK-EGYRD---DQ-------FDKNDKGTWIVNSQ-----------MAIQNKGEPMKSKG-------MVL----YMNRNTRTT----NGYYYVN-VIKGEDKGK---------HQDNEKRYPVKMVD-NKII-LTKEIKDE-NIKI-EIEN----FKFFVQYGNFK----DLENYKDG----DISYNPEVP---SYSA--------KYQLTND-----DYNVKQLRKRYDIPTNKAPKLLLKGTGNLKG-SSVGYKD---------I----------EFTFVEKKEENIYFS--DGLIFKP-SEDK----------------------------------------------
3 PsiBlast_PDB 98.0165% -55 - C6 -4EG9 Y2783_STAA8 A:[27-254] --------------------------------------------------------------------------------GRNAQI-KD-TFNQ---TLK------LYP-TK----NLDDFYDK-EGFRD---QE-------FKKGDKGTWIVNSE-----------MVIEPKGKDMETRG-------MVL----YINRNTRTT----KGYYFIS-EMTDDSNGR---------PKDDEKRYPVKMEH-NKII-PTKPLPND-KLKK-EIEN----FKFFVQYGNFK----DINDYKDG----DISYNPNVP---SYSA--------KYQLNND-----DYNVQQLRKRYDIPTKQAPKLLLKGDGDLKG-SSVGSRS---------L----------EFTFVENKEENIYFT--DSVQYTP-SED-----------------------------------------------
18 Fugue 97.2968% -55 * C6 *4EGD Y2783_STAA8 A:[27-253] --------------------------------------------------------------------------------GRNAQI-KD-TFNQ---TLK------LYP-TK----NLDDFYDK-EGFRD---QE-------FKKGDKGTWIVNSE-----------MVIEPKGKDMETRG-------MVL----YINRNTRTT----KGYYFIS-EMTPKD---------------DEKRYPVKMEH-NKII-PTKPLPND-KLKK-EIEN----FKFFVQYGNFK----DINDYKDG----DISYNPNVP---SYSA--------KYQLNND-----DYNVQQLRKRYDIPTKQAPKLLLKGDGDLKG-SSVGSRS---------L----------EFTFVENKEENIYFT--DSVQYTP-SE------------------------------------------------
2 PsiBlast_PDB 97.2667% -57 - C6 -4EGD Y2783_STAA8 A:[27-253] --------------------------------------------------------------------------------GRNAQI-KD-TFNQ---TLK------LYP-TK----NLDDFYDK-EGFRD---QE-------FKKGDKGTWIVNSE-----------MVIEPKGKDMETRG-------MVL----YINRNTRTT----KGYYFIS-EMT---------------PKDDEKRYPVKMEH-NKII-PTKPLPND-KLKK-EIEN----FKFFVQYGNFK----DINDYKDG----DISYNPNVP---SYSA--------KYQLNND-----DYNVQQLRKRYDIPTKQAPKLLLKGDGDLKG-SSVGSRS---------L----------EFTFVENKEENIYFT--DSVQYTP-SE------------------------------------------------
6 PsiBlast_CBE 96.3567% -67 - C6 -4EGD Y2783_STAA8 B:[27-252] --------------------------------------------------------------------------------GRNAQI-KD-TFNQ---TLK------LYP-TK----NLDDFYDK-EGFRD---QE-------FKKGDKGTWIVNSE-----------MVIEPKGKDMETRG-------MVL----YINRNTRTT----KGYYFIS-EMT----------------KDDEKRYPVKMEH-NKII-PTKPLPND-KLKK-EIEN----FKFFVQYGNFK----DINDYKDG----DISYNPNVP---SYSA--------KYQLNND-----DYNVQQLRKRYDIPTKQAPKLLLKGDGDLKG-SSVGSRS---------L----------EFTFVENKEENIYFT--DSVQYTP-S-------------------------------------------------
1 PsiBlast_PDB 94.5079% -59 - C6 -4BIG - Y053_STAA8 A:[25-244] ---------------------------------------------------------------------------------------KK-SFEK---TLS------MYP-IK----NLEDLYDK-EGYRD---DQ-------FDKNDKGTWIVNSQ-----------MAIQNKGEALKIKG-------MLL----KIDRNTRSA----KGFYYTN-EIKTEKYEV---------AQDNQKKYPVKMIN-NKFI-STEEVKEE-NIKK-EIEN----FKFFAQYSNF---------YKDG----DIS---------SYSA--------QYQLTND-----DYNVKQLRKRYDIPTNKAPKLLLKGT-----------KK---------I----------EFTFLENKNENIYFT--DSLHLEP-S-------------------------------------------------
27 Fugue 46.7510% -14 - C4 -1IVN TESA_ECOLI A:[1-179] ----------------------------------------------A--D-TLLILGDSLSAGYR----M----------SASAAW-PA-LLND---KWS------KTS-VV----N---------------------------ASISGDTSQQGL-----------ARLPALLKQHQPRW-------VLV----ELGGN------------------------------------DGLRGFQPQQTE-QTLRQILQDVKAA-NAEP-LLMQ----IRLPANYG------------RRY----NEAFSAIYP---KLAK--------EFDVPLL-----PFFMEEVYLKPQWMQD----------DGIHP-NRDAQPF---------I----------ADWMAKQLQPLVN--------------------------------------------------------------
19 Fugue 46.3514% 14 - C3 -3TD7 YR596_MIMIV A:[35-295] ------------------------------------HNGLIT-KIWG--T-AGWTFNHAVTFGYPLNPTS----------DDKRRY-KN-YFIS---LGD------VLP-CR----LCRESYKK-FITTG---KTALTNEVLRNRHTLTKWFYDVH-----------NAVNNKLEVDYGLS-------YED----VVNKYESFR----AKCGKVT-PLDHKAFSF---------KKLYYMDAPIVSLD-KVEN-FVRIARMR-GISD-KYFA----FLELATVLNGD----FNELKKQS----SWEYRNKYA---QKKI--------RHMRENA-----IPSIEEQGYWKGTPTIDELKLLLFLASNL---NRTEVND---------A----------INNVERLESTHYIEN------------------------------------------------------------
24 Fugue 44.3115% 13 - C4 -2JEO - UCK1_HUMAN A:[21-235] ------------------------------------MR----------------PFLIGVSGGTA----S----------GKSTVC-EK-IMELLGQNEV------EQR-QR----KVVILSQD-RFYKVLTAEQ-------KAKALKGQYNFDHP-----------DAFD---NDLMHRT-------LKN----IVEGKTVEV----PTYDFVT-----HSRLP---------ETTVVYPADVVLFE-GILV-F----YSQ-EIR--DMFH----LRLFVDTDSDV----RLSRRVLR----DV---RDLE---QILT--------QYTTF----------VKPAFEEFCLPTKKYADVIIPRGVD----NMVAINL---------I----------VQHIQDILNGDI---------------------------------------------------------------
22 Fugue 43.4714% 16 - C4 -4K7J ? A:[26-375] ----------------------GLLTDYGNASASPWMKKLQS-VAQGSGE-TFRILQIGDSHTAG----D----------FFTDSL-RK-RLQK---TWGDGGIGWVYP-ANVKGQRMAAVRHN-GNWQS---LT--------SRNNTGDFPLGGI-----------LAHTGSGGSMTLTASDGIASKQRV----SLFAKPLLA----EQTLTVNGNTVSANGGG---------WQVLDTGAALP------LT-IHTEMPWD-IGFI-NIENPAGGITVSAMGINGA----QLTQWSKW----RADRMNDLA---QTGADLVILSYGTNEAFNN-----NIDIADTEQKWLDTVRQIRDSLPAAGILIIG-APESLKNTLGVCGTRPV----------RLTEVQQMQRRVARQ--GQTMFWS-WQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRSA
26 Fugue 43.2214% 18 * C4 *2UVQ UCK1_HUMAN A:[24-237] -----------------------------------------------------RPFLIGVSGGTA----S----------GKSTVC-EK-IMELLGQNEV------EQR-QR----KVVILSQD-RFYKVLTAEQ-------KAKALKGQYNFDHP-----------DAFD---NDLMHRT-------LKN----IVEGKTVEV----PTYDFVT-----HSRLP---------ETTVVYPADVVLFE-GILV-F----YSQ-EIRD-MF-H----LRLFVDTDSDV----RLSRRVLR----DVRDLEQIL---TQYT--------T-------------FVKPAFEEFCLPTKKYADVIIPRGVD----NMVAINL---------I----------VQHIQDILNGDI---------------------------------------------------------------
20 Fugue 42.5713% 8 - C4 -1T9K MTNA_THEMA A:[5-344] LKTKTMEWSGNSLKLLDQRKLPFIEEYVECKTHEEVAHAIKEMIVRG--A-PAIGVAAAFGYVLG----LRDYKT-----GSLTDWMKQ-VKET---LAR------TRPTAV----NLFWALNRMEKVFF---EN-------ADRENLFEILENEALKMAYEDIEVNKAIGKNGAQLIKDG-------STI----LTHCNAGALATVDYGTALGV-IRAAVESGKRIRVFADETRPYLQGARLTAWELMKDGI-EVYVITDNMAGWLMKRGL----IDAVVVGAD--------RIALNG----DTANKIGTY---SLAV--------LAKRNNI-----PFYVAAPVSTIDPTIRSGEEIPIEERRPEEV-THCGGNR---------IAPEGVKVLNPAFDVTENTLITAIIT--EKGVIRP-PFEENIKKILE---------------------------------------
23 Fugue 39.4216% 21 - C4 -4RWR - ? A:[55-323] ----------------------VYREKQKKVESLPMEEYVTG-VVAS--EMNASFEIEALKAQAL----A----------ARTFVV-QRMLSGG---KKN------NAD-VT----DTDQVYKS-KEELK---KQ-------WGNNYENNLKKIEE-----------AVSKTAGQVLTYEG-------KPISASFFSTSNGRTE----NAADYWG-NDYPYLKSV---------DSPWDQASP-KFTS-EQIF-TVADFQKRLGVKV-------------LADGKVG----DIKGRTEGKRVKDVAFQGKTLTGRDVRD--------KLELRSS-----DFTWKQEGDKIVVTTK--------GFGHGVGMSQYGANGM--------A----------A---EGKKYTDIVAHYYKGVEIKTMNDY-----------------------------------------------
4 PsiBlast_PDB 35.2627% 43 * C5 *3OP1 ? A:[118-220] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKAM-NAKI-IVAG----FDY--TFGSDKKTAEDLKNYFDG----EVIIVPPVE---DEKG--------KISSTRIRQAILDGNVKEAGKLLGAPLPSRGMVV---HGN-------GYPT---------A----------NLVLLDR--------------------------------------------------------------------
5 PsiBlast_PDB 31.8648% 42 - C2 -2XZ8 - PGPLF_DROME A:[59-87] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NWHI-ESNGYKD---------I----------NYNFVAAGDENIYEA--RG--------------------------------------------------------
17 HHSearch 21.0111% 137 - C5 -3TLK FEPB_ECOLI A:[27-62] ----------------------------------------------------------------------ADWPRQITDSRGTHTL-ES-QPQR---IVS------TSV-T-----LTGSLLA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 HHSearch 0.169% 477 - C1 -2AP3 - ? A:[3-17] -------------------------------------------------------MGIQRPTSTT----T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------