@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA0096: (2016-03-12 )
MKRLNKLVLYISFLILVISFTAGCGMGKEAEIKKSFEKTLSMYPIKNLEDLYDKEGYRDDQFDKNDKGTWIINSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGRPKSKDKEYPVKMVDNKIIPTKGIKDENIKKEIENFKFFAQYGSFKDLSKYKDGDISYNPEVPSYSAKYQLTNDDYNVKQLRKRYKIPTNKAPKLLLKGSGDLKGSSVGYKDIEFTFVEKKGENTFFTDSLHLEPSEDK

Atome Classification :

(16 SA) ---------------------------------------------------------------------------------------------------------------------.........10-......-----..20....----.----------...30...-....---.-----40--........50...-.....---60-------........70........80........90........100.......110.....--..120.......130-------------------------..--.....140.......150-------------------.......--..160......-.170--........-.---180.......190.......200....-...210...-----....220.......-.230.......240...---....250....--------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------------------------------------------------------------------------------------------------------------------MKRLNKLVLYI-SFLILV-----ISFTAGCG----M----------GKEAEIKK-SFEK---T-----LS--MYPIKNLEDLYDK-EGYRD---DQ-------FDKNDKGTWIINSEMVVQPKGERMKSKGMVLYMNRNTKTTTGKYIVSETLHDEDGR--PKSKDKEYPVKMVDN-------------------------KI--IPTKGIKDENIKKEIE---------------------NFKFFAQ--YGSFKDLSKYK-DG----DISYNPEV-P---SYSAKYQLTNDDYNVKQLRKRYKIPTN-KAPKLLLKG-----SGDLKG-SSVGYKD-IEFTFVEKKGENTFFTD---SLHLEP-SEDK--------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 99.4066% -47 - C5 -4EG9 Y2783_STAA8 A:[27-254] -------------------------------------------------------------------------------------------------------------------------------------------------------------------GRNAQIKD-TFNQ---T-----LK--LYPTKNLDDFYDK-EGFRD---QE-------FKKGDKGTWIVNSEMVIEPKGKDMETRGMVLYINRNTRTTKGYYFISEMTDDSNGR--PKDDEKRYPVKMEHN-------------------------KI--IPTKPLPNDKLKKEIE---------------------NFKFFVQ--YGNFKDINDYK-DG----DISYNPNV-P---SYSAKYQLNNDDYNVQQLRKRYDIPTK-QAPKLLLKG-----DGDLKG-SSVGSRS-LEFTFVENKEENIYFTD---SVQYTP-SED---------------------------------------------------------------------------------------------------
20 Fugue 98.8668% -44 - C5 -4EGD Y2783_STAA8 A:[27-253] -------------------------------------------------------------------------------------------------------------------------------------------------------------------GRNAQIKD-TFNQ---T-----LK--LYPTKNLDDFYDK-EGFRD---QE-------FKKGDKGTWIVNSEMVIEPKGKDMETRGMVLYINRNTRTTKGYYFISEM------T--PKDDEKRYPVKMEHN-------------------------KI--IPTKPLPNDKLKKEIE---------------------NFKFFVQ--YGNFKDINDYK-DG----DISYNPNV-P---SYSAKYQLNNDDYNVQQLRKRYDIPTK-QAPKLLLKG-----DGDLKG-SSVGSRS-LEFTFVENKEENIYFTD---SVQYTP-SE----------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 98.2867% -46 - C5 -4EGD Y2783_STAA8 A:[27-253] -------------------------------------------------------------------------------------------------------------------------------------------------------------------GRNAQIKD-TFNQ---T-----LK--LYPTKNLDDFYDK-EGFRD---QE-------FKKGDKGTWIVNSEMVIEPKGKDMETRGMVLYINRNTRTTKGYYFISEMT--------PKDDEKRYPVKMEHN-------------------------KI--IPTKPLPNDKLKKEIE---------------------NFKFFVQ--YGNFKDINDYK-DG----DISYNPNV-P---SYSAKYQLNNDDYNVQQLRKRYDIPTK-QAPKLLLKG-----DGDLKG-SSVGSRS-LEFTFVENKEENIYFTD---SVQYTP-SE----------------------------------------------------------------------------------------------------
4 PsiBlast_CBE 95.7967% -57 - C5 -4EGD Y2783_STAA8 B:[27-252] -------------------------------------------------------------------------------------------------------------------------------------------------------------------GRNAQIKD-TFNQ---T-----LK--LYPTKNLDDFYDK-EGFRD---QE-------FKKGDKGTWIVNSEMVIEPKGKDMETRGMVLYINRNTRTTKGYYFISEMT---------KDDEKRYPVKMEHN-------------------------KI--IPTKPLPNDKLKKEIE---------------------NFKFFVQ--YGNFKDINDYK-DG----DISYNPNV-P---SYSAKYQLNNDDYNVQQLRKRYDIPTK-QAPKLLLKG-----DGDLKG-SSVGSRS-LEFTFVENKEENIYFTD---SVQYTP-S-----------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 92.6773% -45 - C5 -4BIG - Y053_STAA8 A:[25-244] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------KK-SFEK---T-----LS--MYPIKNLEDLYDK-EGYRD---DQ-------FDKNDKGTWIVNSQMAIQNKGEALKIKGMLLKIDRNTRSAKGFYYTNEIKTEKYEV--AQDNQKKYPVKMINN-------------------------KF--ISTEEVKEENIKKEIE---------------------NFKFFAQ--YSNF-----YK-DG----DIS----------SYSAQYQLTNDDYNVKQLRKRYDIPTN-KAPKLLLKG-----T-----------KK-IEFTFLENKNENIYFTD---SLHLEP-S-----------------------------------------------------------------------------------------------------
29 Fugue 46.1613% -1 - C3 -3AU7 TIAS_ARCFU A:[20-402] --------------------------------------------------------------------------------------------------HMRVWVGIDTYLAVLAMERVERELGKVIGF-PRLIRLNPTINGAVSFLVE----V----------DDVGELVD-VVNE---VIIEPGAV--FVDEELAVKLKPFADKAIK---DV-------LQIDEALFVIGKYFIPHLRHKKGRGLIGALAAVGAELEDFTLELIAY-RYPERFGT--EREYDEESFFDMDYELYPQTFDNVDWCNDVVVCIPNTPCPVL--YGIRGESVEALYKAMESVKTEPVDRRMIFVTNHATDMHLIGEEE--VHRLENYRSYRLRG----RVTLEPYDIE---GGHVFFEIDTKFGSVKCAAFEPTKQFR-NVIRLLRKGDVVEVYGSMKK-DTINLEK-IQIVELAEGSERELQPG---FYEVPP-SARRHLSKPLIRMNVEGRHIFR--------------------------------------------------------------------------------
22 Fugue 44.2616% 25 * C7 *3TD7 YR596_MIMIV A:[35-295] ---------------------------------------------------------------------------------------------------------------------HNGLITKIWGT-AGWTFN-----HAVTFGYPLNPTS----------DDKRRYKN-YFIS---L-----GD--VLPCRLCRESYKK-FITTG---KTALTNEVLRNRHTLTKWFYDVHNAVNNKLEVDYGLSYEDVVNKYESFRAKCGKVTPLDHKAFSF--KKLYYMDAPIVSLDK-------------------------VE--NFVRIARMRGISDKYF---------------------AFLELATVLNGDFNELKK---QS----SWEYRNKY-A---QKKIRHMRENAIPSIEEQGYWKGTPTI-DELKLLLFL-----ASNL------------NRTEVNDAINNVERLE---STHYIE-N-----------------------------------------------------------------------------------------------------
28 Fugue 43.8714% 14 - C6 -2JEO - UCK1_HUMAN A:[21-235] ---------------------------------------------------------------------------------------------------------------------MR-------------PFL-----IGVSGGTA----S----------GKSTVCEK-IMELLGQN-----EV--EQRQRKVVILSQD-RFYKVLTAEQ-------KAKALKGQYNFDHPDAF----DNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETT--VVYP---ADVVLFEG-------------------------IL--V----FYSQEIRDMF----------------------HLRLFVD--TDSDVRLSRRV-LR----DV---RDL-E---QILTQYTTF-----VKPAFEEFCLPTK-KYADVIIPR-----GVD-------------------NMVAINLIVQ---HIQDIL-NGDI--------------------------------------------------------------------------------------------------
27 Fugue 42.5015% 28 * C6 *4RWR - ? A:[55-323] -------------------------------------------------------------------------------------------------------VYREKQKKVESLPMEEYVTGVVASEMNASFEI-----EALKAQAL----A----------ARTFVVQRMLSGG---K-----KN--NADVTDTDQVYKS-KEELK---KQ-------WGNNYENNLKKIEEAVSKTAGQVLTYEGKPISAS-FFSTSNGR---TENAADYWGNDYPYLKSVDSPWDQASP-------------------------KF--TSEQIFTVADFQKRLG---------------------VKVL--A--DGKVGDIKGRT-EGKRVKDVAFQGKT-LTGRDVRDKLELRSSDFTWKQEGDKIVVTTK---------G-----FGHGVGMSQYGANGMAA----EGKKYTDIVAHYYKGVEIKTMNDY---------------------------------------------------------------------------------------------------
26 Fugue 42.4116% 34 - C4 -1K45 - ? A:[1-168] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLVANINGGFESTPAGVVTDLAEGVEGWDLNVGSSVTNPPVFEVLETSDAP--EGNKVLAVTVNGVGN-------------------------NPWDIEATAFPVNVRPGVTY---------------------TYTIWAR--A-------EQD-GA----VVSFTVGN-Q---SFQEYGRLHEQQITTEWQPFTFEFTVS-DQ-------------------ETVIRAP-IHFGYAANVG-NTIYID---GLAIAS-QP----------------------------------------------------------------------------------------------------
23 Fugue 39.7413% 27 - C7 -4Q6O ? A:[21-437] MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWG-NCFII------------------------------DQDEVKG-AKFP---N-----LL--AFANNTIESINAH-LLHPI---EE-------YHLKNTRTAQGDTEMQK----------ALTFYAINQKKSAFANEASKELPLASRVF--YHLQAIEGLLNQLNI-------------------------PF--KRDFDLNPNSVHALIN---------------------DKNLWAK--ISSL-------------------PKM-P---LFNLRPKLNH-----------FPLPHNTKIPQIPIES-----NAYI-----VGLVK-NKQEVFLKYGN----KL---MTRLSP-FYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV
19 HHSearch 35.7521% 71 - C5 -1IIO - ? A:[10-33] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------RGQIIG-ALA----------GA--DFPINSPEELMAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 Fugue 32.9714% 61 * C5 *1IIO - ? A:[-3-81] --------------------------------------------------------------------------------------------------------------------------------------------------MK----M----------GVKEDIRG-QIIG---A-----LAGADFPINSPEELMAA--------------------------LPNGPDTTCKSGDVELKASDAGQVLTADDFPFKSAEEVADTIVNKAGL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 27.278% 129 - C5 -3TLK FEPB_ECOLI A:[27-62] ---------------------------------------------------------------------------------------------------------------------------------------------------------ADWPRQITDSRGTHTLES-QPQR---I-----VS--TSVT-LTGSLLA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 9.2310% 501 - C1 -2AP3 - ? A:[4-17] --------------------------------------------------------------------------------------------------------------------------------------G-----IQRPTSTT----T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 HHSearch 6.2010% 951 - C2 -3C9H - ? A:[16-28] ---------------------------------------------------------------------------------------------------------------------------------------------PALAQVA----V------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------