@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SA0663: (2016-03-17 )
MNTKYFLAVGAVASVLTLGACGNSNSQDQGNKTEQKTKSEDSNVKTDKTKHLTGTFSSKNGETVEGKAEIKNGKLMLTNYKSSKGPDLYVYLTKNGDIKNGKEIAMVDYDKEKQTFDLKNVDLSKYDEVTIYCKKAHVIFGGAKLK
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......----...10........------20.......------------------------.30--.........40........50........60.-..-----.....70........80....---------....90.......----.100.......110-.........120.......130.....----------..140....---------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MN
T
K
Y
F
----
L
A
V
G
A
V
A
S
V
L
T
LG------ACGNSNSQD------------------------QG---NKTEQKTKSEDSNVKTDKT
K
H
L
T
G
T
FSSKNGE-TV-----EG
K
A
E
IKN
G
K
L
M
L
T
NYKSSKG---------P
D
L
Y
V
Y
L
TKNGDI----KNG
K
E
I
A
M
V
DYD---KEKQTFDLKNVDLSKY
D
E
V
T
I
Y
C
K
K
A
H
----------
V
I
FGGAKLK---------------------------------------------------------------------------
59
Fugue
76.50
15%
-16
- C3 -
3UNP
1
A:
[2-198]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
G
V
T
E
E
----
Q
V
H
H
I
V
K
Q
A
L
Q
R
Y
------
S
E
D
R
I
G
L
A
D
YALESGGASVIST
R
C
S
E
T
YETKTA
F
G
---
I
P
L
W
Y
H
S
Q
S
P
R
V
I
L
Q
P
D
V
H
P
G
N
C
W
A
F
Q
G
P
Q
G
F
A
V
V
-----
R
L
S
A
R
I
R
P
T
A
V
T
L
E
H
V
P
K
A
L
S
PNSTISSAP
K
D
F
A
I
F
G
F
D
E
D
L
Q
----
Q
E
G
T
L
L
G
K
F
T
Y
D
QDG
E
P
I
Q
T
F
H
F
Q
A
P
T
M
A
T
Y
Q
V
V
E
L
R
I
L
T
N
W
GHPE
Y
T
C
I
Y
R
F
R
V
H
G
E
P
A
H
---------------------------------------------------------------------------
55
Fugue
68.72
27%
49
* C3 *
1SQJ
-
CBHRE_GEOS1
A:
[4-786]
Y
E
F
K
N
VAIGGGGYIT
G
I
V
A
H
PKTKDL
L
Y
A
R
T
DI
G
G
A
Y
R
W
D
AGTS
K
W
I
P
LNDFIEAQDMNIMGTE
S
I
A
L
D
PNNPD
R
L
Y
L
A
Q
G
R
Y
VGDE
W
A
A
F
Y
V
S
EDRGQ
S
F
T
I
Y
E
S
P
F
P
M
G
ANDMGRNNGER
L
A
V
N
PFNSN
E
V
W
M
GTRTE
G
I
W
K
S
SDRAK
T
W
T
N
VTSIPDAFTNGIGYT
S
V
I
F
DPERNG
T
I
Y
A
S
A
TAPQG
M
Y
V
T
HDGGV
S
W
E
P
VAGQPSSWLNRTTGAFPDKKPASIAPQPM
K
V
A
L
T
PN
F
L
Y
V
T
Y
A
DYPGPWGVT
F
G
E
V
W
R
Q
NRTSG
A
W
D
D
ITPRVGNSSPAPYNNQTFPA
G
G
F
C
GLSVDATNPN
R
L
V
V
I
T
L
DRDPGPA
L
D
S
I
Y
L
S
TDAGATWKD
V
T
Q
L
S
SPSNLEGNWGHPTNAARYKDGTPVPWLDFNNGPQWGGYGAPHGTPGLTKFGWWMSAVLIDPFNPE
H
L
M
Y
G
T
GA
T
I
W
A
T
DTLSRVEKDWAP
S
W
Y
L
QIDG
I
E
E
N
A
I
LSLRSPKSGAA
L
L
S
G
I
G
DISGMKHDDLT
K
P
Q
K
M
FGAPQFSNLD
S
I
D
A
A
GNFPN
V
V
V
R
A
G
S
S
GHEYDSACARGAYATDGGD
A
W
T
I
FPTCPPG
M
N
A
S
H
Y
Q
G
S
T
I
A
V
D
A
S
G
S
Q
I
V
W
S
TKLDEQ
A
S
G
P
W
Y
S
H
D
------------------------
Y
G
K
T
W
S
V
P
A
G
D
L
K
A
Q
T
A
N
V
L
S
D
K
V
Q
--
D
G
T
F
Y
A
T
D
G
G
-
K
F
F
V
S
TD
G
G
K
S
Y
A
A
K
G
A
G
L
V
T
G
--
T
S
L
M
---------
P
A
V
N
P
W
V
--
A
G
D
V
W
V
P
V
P
E
G
G
L
F
H
S
T
D
F
G
---
A
-----
S
F
T
R
V
G
T
A
N
A
T
L
V
S
V
G
A
P
K
A
P
S
A
V
-------
F
I
W
G
T
D
K
P
G
SDI
G
L
Y
R
S
DDNGS
T
W
T
R
VNDQEHNYSGPT
M
I
E
A
D
PKVYG
R
V
Y
L
G
T
NGR
G
I
V
Y
A
D
L
T
NE
E
K
S
T
A
K
C
ANGQKGTHCY
5
PsiBlast_PDB
68.45
26%
-74
- C5 -
4JY6
1
?
B:
[27-101]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
S
I
N
D
A
Y
W
S
W
I
R
Q
S
P
G
K
R
---------
P
E
W
V
G
Y
V
H
H
S
G
D
T
N
Y
N
-
P
S
L
K
R
R
V
T
F
S
L
D
---
T
A
K
N
E
V
S
L
K
L
V
D
L
T
A
A
D
S
A
T
Y
F
C
A
R
A
-----------------------------------------------------------------------------------------------
29
PsiBlast_CBE
65.38
33%
1
- C8 -
3HG5
3
AGAL_HUMAN
B:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
26
PsiBlast_CBE
65.12
33%
3
- C8 -
4NXS
2
AGAL_HUMAN
B:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
31
PsiBlast_CBE
65.04
33%
0
- C8 -
3HG2
2
AGAL_HUMAN
B:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
33
PsiBlast_CBE
64.62
33%
-0
* C8 *
3GXP
3
AGAL_HUMAN
B:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
64.45
33%
-4
- C8 -
3HG2
1
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
64.36
33%
-0
- C8 -
4NXS
2
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
30
PsiBlast_CBE
64.06
33%
1
- C8 -
3HG4
3
AGAL_HUMAN
B:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
63.90
33%
-4
- C8 -
3LXB
2
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
63.86
33%
-3
- C8 -
3HG5
2
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
63.38
33%
2
- C8 -
3LXA
2
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
63.16
33%
-1
- C8 -
3GXN
-
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
62.87
33%
2
- C8 -
3GXT
3
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
62.85
33%
-4
- C8 -
3HG4
2
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
62.78
33%
3
- C8 -
3GXP
2
AGAL_HUMAN
A:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
28
PsiBlast_CBE
62.73
33%
-3
- C8 -
3S5Y
5
AGAL_HUMAN
B:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
25
PsiBlast_CBE
62.65
33%
-4
- C8 -
3LX9
2
AGAL_HUMAN
B:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------
27
PsiBlast_CBE
62.48
33%
3
- C8 -
3S5Z
2
AGAL_HUMAN
B:
[81-143]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
F
P
H
G
I
R
Q
L
A
N
Y
V
H
S
K
G
---------
L
K
L
G
I
Y
A
D
V
G
N
K
T
----
C
A
G
F
P
G
S
F
G
Y
Y
D
---
I
D
A
Q
T
F
A
D
W
G
V
D
L
L
K
F
D
--
G
C
Y
C
--------------------------------------------------------------------------------------------------