@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA0675: (2016-03-17 )
MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMIDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREESEVAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILEDYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSYTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ

Atome Classification :

(20 SA) ------------------------------------------------------------------.........10...-.-------.-.-..----20...----..-...30........40........50..-------..-....--.60...--------------..---.-.--.70....-..-.---.--80....--....90........100.......110..--....-.120.......130.......140.......150.-.-..-.....160.......170....--...180.......190--........200.----..---....210.......220.....------..230.......240.......250.......260.......270.......280.......290.......300--........310-......--.320.......-330.........340.......350.......360.......370-------------------.........380-------.-----------........390.-.------------------------------------------------------------------------.--.....400.....----------------------------------------------------------------------.------.410-------------------------.........420.......430.-......440.......450.......---460.......470..----.....480....----.----..490.......500.......510-----.--.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620...
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------------------------------------------------------MEAYKIEHLNKSYA-D-------K-T-IF----DNLDL----SI-SEGEKIGLVGINGTGKSTLLKVIG-GI-------DD-DFTA--NVMHPN--------------QY---R-I--RYSSQKQ-DL-N---E--DMTVFD--AVLSSDTTTLRIIKQYEQAVQAYADDQSD--KLFK-RMIDAQDAMDQHDAWDYNAEIKTILSKLGIHD--T-T-KY-IKELSGGQQKRVVLAKTLIEQP--DLLLLDEPTNHLDFE---SISWLINYVKQY----PH---TVLFVTHDRYFLNEVSTRIIEL------NRGKLASYPGNYESYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYK---DDKGELNLAYS-RLGKQV--FELEDLSKAIN-D--KVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQ---------------------FEGKLKTGQT---------V-----------KVAYFKQTDE-T-L------------------------------------------------------------------------D--RDIRMIDYLREES----------------------------------------------------------------------E------VA---------------------------KEKDGTSVSITQLLERFLFPSAT-HGKKVYKLSGGEQKRLYLLRLLVHQP---NVLLLDEPTNDLDTE----TLTILEDYIHTF----G----GTVITVSHDRYFLNKVAQSYWFIH------D--GQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSYTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ
2 PsiBlast_PDB 91.4837% -70 - C1 -4FIN ETTA_ECOLI A:[19-535] -----------------------------------------------------------------------------------------R-H-IL----KNISL----SF-FPGAKIGVLGLNGAGKSTLLRIMA-GI-------DK-DIEG--EARPQP--------------DI---K-I--GYLPQEP-QL-N---P--EHTVRE--SIEEAVSEVVNALKRLDEVYALYADPDADFDKLAA-EQGRLEEIIQ------LNVQLERAADALRLPD--W-D-AK-IANLSGGERRRVALCRLLLEKP--DMLLLDEPTNHLDAE---SVAWLERFLHDF----EG---TVVAITHDRYFLDNVAGWILEL------DRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTK----KGKARLARFEEL-NSTEYQKR---NETNELFIPPGPRLGDKV--LEVSNLRKSYG-D--RLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQP---------------------DSGTITLGET---------V-----------KLASVDQFRD-S-M------------------------------------------------------------------------D--NSKTVWEEVSGGL----------------------------------------------------------------------D------IM---------------------------KIGN-TEMPSRAYVGRFNFKGVD-QGKRVGELSGGERGRLHLAKLLQVGG---NMLLLDEPTNDLDIE----TLRALENALLEF----P----GCAMVISHDRWFLDRIATHILDYQ------DE-GKVEFFEGNFTEYEEYKK-----------------------------------------------------------------------------------------------
1 PsiBlast_PDB 90.8737% -53 - C1 -3J5S - ETTA_ECOLI D:[12-541] ---------------------------------------------------------------------YTMHRVGKVVP-P-------K-RHIL----KNISL----SF-FPGAKIGVLGLNGAGKSTLLRIMA-GI-------DK-DIEG--EARPQP--------------DI---K-I--GYLPQEP-QL-N---P--EHTVRE--SIEEAVSEVVNALKRLDEVYALYADPDADFDKLAA-EQGRLEEIIQAHDGHNLNVQLERAADALRLPD--W-D-AK-IANLSGGERRRVALCRLLLEKP--DMLLLDEPTNHLDAE---SVAWLERFLHDF----EG---TVVAITHDRYFLDNVAGWILEL------DRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTKGRQSKGKARLARFEEL-NSTEYQKR---NETNELFIPPGPRLGDKV--LEVSNLRKSYG-D--RLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQP---------------------DSGTITLGET---------V-----------KLASVDQFRD-S-M------------------------------------------------------------------------D--NSKTVWEEVSGGL----------------------------------------------------------------------D------IM---------------------------KIGN-TEMPSRAYVGRFNFKGVD-QGKRVGELSGGERGRLHLAKLLQVGG---NMLLLDEPTNDLDIE----TLRALENALLEF----P----GCAMVISHDRWFLDRIATHILDYQ------DE-GKVEFFEGNFTEYEEYKK-----------------------------------------------------------------------------------------------
35 HHSearch 78.3828% -74 - C- -2IW3 EF3A_YEAST A:[440-979] -------------------------------------------------------------------------EFSLAYG-A-------K-I-LL----NKTQL----RL-KRARRYGICGPNGCGKSTLMRAIA-NG-------QV---DG--FPT-QE--------------EC---R-T--VYVEHDI-DGTH---S--DTSVLD--FVFESGV--------------------------------------------GTKEAIKDKLIEFGFTDE-MIA-MP-ISALSGGWKMKLALARAVLRNA--DILLLDEPTNHLDTV---NVAWLVNYLNTC----GI---TSITISHDSVFLDNVCEYIINY------EGLKLRKYKGNFTEFVKKCPAAKA-----YEELS----------------------NT-----DLE--FK-FPE---P--GYLE-GVK-TKQKAI--VKVTNMEFQYP-GTSKPQITDINFQCSLSSRIAVIGPNGAGKSTLINVLTGELLP---------------------TSGEVYTHEN---------C-----------RIAYIKQHAF-AHI------------------------------------------------------------------------ESHLDKTPSEYIQWRFQTGEDRETMDRANRQINENDAEAMNKIFKIEGTPRRIAGIHSRRKFKNTYEYECSFLLGENIGMKSERWVPMMSVDNAWIPRGELVESHSKMVAEVDMKEALASGQFRPLTRK-EIEEHCSMLGLDPEIVSHSRIRGLSGGQKVKLVLAAGTWQRP---HLIVLDEPTNYLDRD----SLGALSKALKEF----E----GGVIIITHSAEFTKNLTEEVWAVK------D--GRMTPS-----------------------------------------------------------------------------------------------------------
39 HHSearch 66.1121% -58 - C1 -3OZX ? A:[4-464] -------------------------------------------------------------------------EVIHRYK-VN------G-F-KL----FGLPT-----P-KNNTILGVLGKNGVGKTTVLKILA-GE-------II-PNFG--DPNSKVGKDEVLKRFR----GK---E-I--YNYFKEL-YS-----N--ELKIVH--KIQYVEYA-SK---------------------FLK---GTVNEI---LTKIDERGKKDEVKELLNMTN--LWN-KD-ANILSGGGLQRLLVAASLLREA--DVYIFDQPSSYLDVR---ERMNMAKAIRELLK--NK---YVIVVDHDLIVLDYLTDLIHII------Y-GESSVY-GRVSKSYAARV-----------GINNFLK---GYLP----AE----NMKIRP-DEIK--FM-LK------------------LKTK--MKWTKIIKKLG-D---FQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITA---------------------DEGSVTPEK----------Q-----------ILSYKPQRIF---P------------------------------------------------------------------------N--YDGTVQQYLENAS----------------------------------------------------------------------K------DA---------------------------L-STSSW-FFEEVTKRLNLH-RL-LESNVNDLSGGELQKLYIAATLAKEA---DLYVLDQPSSYLDVE----ERYIVAKAIKRVTRERK----AVTFIIDHDLSIHDYIADRIIVFK------G--EPE--------------------------------------------------------------------------------------------------------------
38 HHSearch 63.4024% -50 - C1 -1YQT ? A:[25-480] ------------------------------------------------------------------------EDCVHRYG-VN------A-F-VL----YRLP-----VV-KEGMVVGIVGPNGTGKSTAVKILA-GQ-------LI-PNLCGDNDSWDG--------------VI---R-AFRGNELQNYFEK-L---K--NGEIRP--VVKPQYVDLIP----------KA---------VKG-KVI------ELLKKADETGKLEEVVKALELEN--VLE-RE-IQHLSGGELQRVAIAAALLRNA--TFYFFDEPSSYLDIR---QRLNAARAIRRLSEE-GK---SVLVVEHDLAVLDYLSDIIHVV------YGEP-----GVYGIFSQPKGTRN--------GINEFLR---GYLKD----------ENV-RFRPYE--IK-FTK----TGERV----E-IERETL--VTYPRLVKDYG-S---FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEP---------------------TEGKIEWDL----------------------TVAYKPQYIK-A--------------------------------------------------------------------------D--YEGTVYELLSKID----------------------------------------------------------------------A------SK-----------------------------LNSNF-YKTELLKPLGII-DL-YDREVNELSGGELQRVAIAATLLRDA---DIYLLDEPSAYLDVE----QRLAVSRAIRHLMEKNE----KTALVVEHDVLMIDYVSDRLMVFE------G--EPG--------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 61.4425% -46 - C1 -3BK7 ? A:[114-539] -------------------------------------------------------------------------------------------------------------V-KDGMVVGIVGPNGTGKTTAVKILA-GQLIPNLCEDN-DSWD--NVIR----------------AF---R-------------G-N---E--LQNYFE--RLKNGEIRPV-VKPQYVDLLPKAVKGKVR--ELLK-KV----DEVGKFEEVVKELELENVLDR------------E-LHQLSGGELQRVAIAAALLRKA--HFYFFDEPSSYLDIRQRLKVARVIRRLANE----GK---AVLVVEHDLAVLDYLSD-VIHV------VYGE----PGVYGIFSKPKGTRNGINEFLQ----GYLKDENVRFRP-YEIRFTKLSERV----DVERETLVEYPRLVKDYGSFKL-------------EVEPGE------------------IRKGEVIGIVGPNGIGKTTFVKMLAGVEEP---------------------TEGKVEWDLT---------VAY---------KPQYIKAEYEGT-V------------------------------------------------------------------------Y--ELLSKIDSSKLNS----------------------------------------------------------------------N------FY---------------------------KTELLKPLGIIDLYDR-----------NVEDLSGGELQRVAIAATLLRDA---DIYLLDEPSAYLDVE----QRLAVSRAIRHL----MEKNEKTALVVEHDVLMIDYVS---------------------------------------------------------------------------------------------------------------------------------
36 HHSearch 61.1423% -48 - C1 -3BK7 ? A:[83-547] --------------------------------------------------------------------AISIVNLPEQLD-EDCVHRYGV-N-AF----VLYRL----PIVKDGMVVGIVGPNGTGKTTAVKILA-GQ-------LI-PNLC--EDNDSW--------------D----N-V--IRAFRGN-EL-Q---N--YFERLKNGEIRPVVK------PQYVDLL--------P--KAVK---GKVREL---LKKVDEVGKFEEVVKELELEN--VLD-RE-LHQLSGGELQRVAIAAALLRKA--HFYFFDEPSSYLDIR---QRLKVARVIRRLANE-GK---AVLVVEHDLAVLDYLSDVIHVV------YGEP-----GVYGIFSKPKGTRN--------GINEFLQG---YLK----DE----NVRFRP-YEIR--FT-KLS--------E--RVD-VERETL--VEYPRLVKDYG-S---FKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEP---------------------TEGKVEWD-----------L-----------TVAYKPQYIK-A--------------------------------------------------------------------------E--YEGTVYELLSKID----------------------------------------------------------------------S------SK-----------------------------LNSNF-YKTELLKPLGII-DL-YDRNVEDLSGGELQRVAIAATLLRDA---DIYLLDEPSAYLDVE----QRLAVSRAIRHLMEKNE----KTALVVEHDVLMIDYVSDRLIVFE------G-------------------------------------------------------------------------------------------------------------------
49 HHSearch 60.3523% -65 - C1 -1V43 - ? A:[8-239] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKMVE--VKLENLTKRFG-N--FTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEP---------------------TEGRIYFGDRDVTYLPPKDR-----------NISMVFQ-----------------------------------------------------------------------------------HMTVYENIAFPL------------------------------------------------------------------------------KKF-------------------------PKDEIDK-RVRWAAELLQIE-EL-LNRYPAQLSGGQRQRVAVARAIVVEP---DVLLMDEPLSNLDAK----LRVAMRAEIKKLQQKLK----VTTIYVTHDQVEAMTMGDRIAVMN------R--GQLL-QIGSPTEVYLR-------------------------------------------------------------------------------------------------
56 HHSearch 60.3227% -70 - C1 -3RLF MALK_ECOLI A:[2-226] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AS--VQLQNVTKAWG-E--VVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETI---------------------TSGDLFIGEKRMNDTPPAER-----------GVGMVFQSYA---L------------------------------------------------------------------------Y--PHLSVAENMSFGL----------------------------------------------------------------------K------LAGA-------------------------KKEVINQ-RVNQVAEVLQLAH-L-LDRKPKALSGGQRQRVAIGRTLVAEP---SVFLLDEPLSNLDAA----LRVQMRIEISRLHKRLG----RTMIYVTHDQVEAMTLADKIVVLD------A--GRVA-QVGKPLELYHYPA-----------------------------------------------------------------------------------------------
10 PsiBlast_PDB 59.8425% -38 - C1 -3J15 ? B:[100-525] -------------------------------------------------------------------------------------------------------------V-KDGMVVGIVGPNGTGKTTAVKILA-GQLIPNLCEDN-DSWD--NVIR----------------AF---R-------------G-N---E--LQNYFE--RLKNGEIRPV-VKPQYVDLLPKAVKGKVR--ELLK-KV----DEVGKFEEVVKELELENVLDR------------E-LHQLSGGELQRVAIAAALLRKA--HFYFFDEPSSYLDIRQRLKVARVIRRLANE----GK---AVLVVEHDLAVLDYLSD-VIHV------VYGE----PGVYGIFSKPKGTRNGINEFLQ----GYLKDENVRFRP-YEIRFTKLSERV----DVERETLVEYPRLVKDYGSFKL-------------EVEPGE------------------IRKGEVIGIVGPNGIGKTTFVKMLAGVEEP---------------------TEGKVEWDLT---------VAY---------KPQYIKAEYEGT-V------------------------------------------------------------------------Y--ELLSKIDSSKLNS----------------------------------------------------------------------N------FY---------------------------KTELLKPLGIIDLYDR-----------NVEDLSGGELQRVAIAATLLRDA---DIYLLDEPSAYLDVE----QRLAVSRAIRHL----MEKNEKTALVVEHDVLMIDYVS---------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 59.4820% -45 - C1 -3J16 RLI1_YEAST B:[81-559] ------------------------------------------------------------------------AHVTHRYS-A-------NSF-KL----HRLP-----TP-RPGQVLGLVGTNGIGKSTALKILA-GK-------QK-PNLG--RFDDPP--------------EWQ--EII--KYFRG-S-EL-Q---NYFTKMLED--DIKAIIKPQY-VD-NIPRA---I----------KG-PVQKVGELLK-LRMEKSPEDVKRYIKILQLEN--VLK-RD-IEKLSGGELQRFAIGMSCVQEA--DVYMFDEPSSYLDVK---QRLNAAQIIRSLLAP-TK---YVICVEHDLSVLDYLSDFVCII------YGVPSVY--GVVTLPASVRE-----------GINIFLDGH-------IPAENL--RFRTEALQFR---IA-DAT------EDL---QN-DSASRA--FSYPSLKKTQG----DFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKP---------------------DEGQDIP--K---------L-----------NVSMKPQKIA-P-K---------------------------------------------------------------------------FPGTVRQLFFKKI----------------------------------------------------------------------R------GQ---------------------------F--LNPQ-FQTDVVKPLRID-DI-IDQEVQHLSGGELQRVAIVLALGIPA---DIYLIDEPSAYLDSE----QRIICSKVIRRFILHNK----KTAFIVEHDFIMATYLADKVIVFE------GIPSKNA-HARAPESLLT--------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 59.0726% -35 - C1 -1YQT ? A:[44-435] -------------------------------------------------------------------------------------------------------------V-KEGMVVGIVGPNGTGKSTAVKILA-G-----------QLIP--NLCGDN--------------DSWDGV-I--RAFRG------N---E--LQNYFE--KLKNGEIRPV-VKPQYVDLIPKAVKGKVI--ELLK-KA-------------DETGKLEEVVKALELEN--V-LERE-IQHLSGGELQRVAIAAALLRNA--TFYFFDEPSSYLDIRQRLNAARAIRRLSEE----GK---SVLVVEHDLAVLDYLSD-IIHV------VYGE----PGVYGIFSQPKGTR----NGINEFLRGYLKDENVRFRP-YEIKFTKTGERV----EIERETL--------------VTYP-RLVKDYGSFRLEVEPGEI----------------KKGEVIGIVGPNGIGKTTFVKMLAGVEEP---------------------TEGKIEWDLT---------VAY---------KPQYIKADYEGT-V------------------------------------------------------------------------Y--ELLSKIDASKLNS----------------------------------------------------------------------N------FY---------------------------KTELLKPLGIIDLYDR-----------EVNELSGGELQRVAIAATLLRDA---DIYLLDEPSAYLDVE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 HHSearch 59.0423% -51 - C1 -2R6F ? A:[487-944] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FLQNVGLDYL-TLS-RS-AGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQR---DNDRLIATLKSMRDL-GN---TLIVVEHDEDTML-AADYLIDIGPGAGIHGGEVVAA-GTPEEVMNDPNS--------------LTG---QYLS----G-----KK----F------IP-IPA-----------ERR-RPDGRW--LEVVGAR--------EHNLKNVSVKIPLGTFVAVTGVSGSGKSTLVNEVLYKALAQKLHRAKAKPGEHRDIRGLEHLDKVIDIDQS---------PIGRTPRSNPATYTGVFDDIRD-V-FASTNEAKVRGYKKGRFSFNVKGGRCEACHGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKNIAEV--LDMTVEDALDFFA----------------------------------------------------------------------S-------------------------------------IPKIK-RKLETLYDVGLGYMK-LGQPATTLSGGEAQRVKLAAELHRRSNGRTLYILDEPTTGLHVD----DIARLLDVLHRLVDN-G----DTVLVIEHNLDVIK-TADYIIDLGPEGGDRG--GQIV-AVGTPEEVAEVK------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 58.2327% -48 - C1 -2IW3 EF3A_YEAST A:[444-743] -----------------------------------------------------------------------------AYG-A-------K-I-LL----NKTQL----RL-KRARRYGICGPNGCGKSTLMRAIANGQ-------VD-GF--------PT--------------QE---E-C--RTVYVEH-DI-DGTHS--DTSVLD--FVFESGVGTKEAIK--------------D--KLIE----------------------------FGFTDEMI-A-MP-ISALSGGWKMKLALARAVLRNA--DILLLDEPTNHLDTV---NVAWLVNYLNTC----GI---TSITISHDSVFLDNVCEYIINY------EGLKLRKYKGNFTEFVK-KCPAAKAYEELSNTDLEFKFPEPGYLE-GVK---TKQKA-IVKVTNMEFQYPGTSK---PQITDINFQCS--------------LSS----------------------RIAVIGPNGAGKSTLINVLTGELLP---------------------TSGEVYTHEN---------C-----------RIAYIKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57 HHSearch 58.1629% -73 - C1 -1Z47 ? A:[13-234] -------------------------------------------------------------------MTIEFVGVEKIYPGG-------A-R-SV----RGVSF----QI-REGEMVGLLGPSGSGKTTILRLIA-GL-------ER-PTKG--DVWIGGKRVTDLPPQ-----KR---N-V--GLVFQNY-AL-F---Q--HMTVYD--NVSFGLREKRV-------------------------------------PKDEMDARVRELLRFMRLES--YAN-RF-PHELSGGQQQRVALARALAPRP--QVLLFDEPFAAIDTQ---IRRELRTFVRQVHDEMGV---TSVFVTHDQEEALEVADRVLVL------HEGNVEQF-GTPEEVY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45 HHSearch 57.6627% -56 - C1 -1Z47 ? A:[11-237] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMT--IEFVGVEKIYPGG--ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERP---------------------TKGDVWIGGKRVTDLPPQKR-----------NVGLVFQNYA---L------------------------------------------------------------------------F--QHMTVYDNVSFGL----------------------------------------------------------------------R------EKRV-------------------------PKDEMDA-RVRELLRFMRLE-SY-ANRFPHELSGGQQQRVALARALAPRP---QVLLFDEPFAAIDTQ----IRRELRTFVRQVHDEMG----VTSVFVTHDQEEALEVADRVLVLH------E--GNVE-QFGTPEEVYEKP------------------------------------------------------------------------------------------------
28 Fugue 57.2618% -30 - C1 -3J16 RLI1_YEAST B:[1-608] MSDKNSRIAIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIINLPTNLE-A-------H-V-THRYSANSFKLHRLPTP-RPGQVLGLVGTNGIGKSTALKILA-GK-------QKPNLGR--FDDPPE--------------WQ---E-I--IKYFRGS-EL-Q---N--YFTKML--E----DDIKAIIKPQYVDNIPRAIKGPVQ--KVGE-LLKLR--------MEKSPEDVKRYIKILQLEN--V-L-KRDIEKLSGGELQRFAIGMSCVQEA--DVYMFDEPSSYLDVK---QRLNAAQIIRSL----LAPTKYVICVEHDLSVLDYLSDFVCII------YG----------------VPSVYGVVTLPASVREGINIFLDGHIP------AENLRFRTEALQFRIADATEDLQ---NDSASRAFSYP-SLKKTQ--------------G--DFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKP---------------------DEGQDIPKLN---------V-----------SMKPQKIAPK-F-P------------------------------------------------------------------------G--T-------VRQLF----------------------------------------------------------------------F------KK---------------------------IRGQFLNPQFQTDVVKPLRIDDI-IDQEVQHLSGGELQRVAIVLALGIPA---DIYLIDEPSAYLDSEQRIICSKVIRRFILHN----K----KTAFIVEHDFIMATYLADKVIVFE------GIPSKNAHARAPESLLTGCNRFLKNLNVTFRRDPNSFRPRINKLDSQMDKEQKSSGNYFFLDNTGI--------------------------------------------------
3 PsiBlast_PDB 56.6227% -43 - C1 -2IWH EF3A_YEAST A:[444-743] -----------------------------------------------------------------------------AYG-A-------K-I-LL----NKTQL----RL-KRARRYGICGPNGCGKSTLMRAIANGQ-------VD-GF--------PT--------------QE---E-C--RTVYVEH-DI-DGTHS--DTSVLD--FVFESGVGTKEAIK--------------D--KLIEFGFTDEMIAMP-------------------------------ISALSGGWKMKLALARAVLRNA--DILLLDEPTNHLDTV---NVAWLVNYLNTC----GI---TSITISHDSVFLDNVCEYIINY------EGLKLRKYKGNFTEFVK-KCPAAKAYEELSNTDLEFKFPEPGYLE-GVK---TKQKA-IVKVTNMEFQYPGTSK---PQITDINFQCS--------------LSS----------------------RIAVIGPNGAGKSTLINVLTGELLP---------------------TSGEVYTHEN---------C-----------RIAYIKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53 HHSearch 56.3424% -63 - C1 -2YYZ ? A:[2-225] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PS--IRVVNLKKYFG-K--VKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKP---------------------TSGEIYFDDVLVNDIPPKYR-----------EVGMVFQNYA---L------------------------------------------------------------------------Y--PHMTVFENIAFPL----------------------------------------------------------------------R------ARRI-------------------------SKDEVEK-RVVEIARKLLID-NL-LDRKPTQLSGGQQQRVALARALVKQP---KVLLFDEPLSNLDAN----LRMIMRAEIKHLQQELG----ITSVYVTHDQAEAMTMASRIAVFN------Q--GKLV-QYGTPDEVYDSP------------------------------------------------------------------------------------------------
44 HHSearch 56.2124% -47 - C1 -1OXX ? K:[1-310] ------------------------------------------------------------------MVRIIVKNVSKVFK-KGK-----V-V-AL----DNVNI----NI-ENGERFGILGPSGAGKTTFMRIIA-GL-------DV-PSTG--ELYFDDRLVASNGKLIVPPEDR---K-I--GMVFQTW-AL-Y---P--NLTAFE--NIAFPLTNMK-------------------------------------MSKEEIRKRVEEVAKILDIHH--VLN-HF-PRELSGAQQQRVALARALVKDP--SLLLLDEPFSNLDAR---MRDSARALVKEVQSRLGV---TLLVVSHDPADIFAIADRVGVL------VKGKLVQV-GKPEDLYDNPVSIQV---------ASLIGEINEL------------EGKV---TNEG--VV-IG------SLRFP-VSV-SSDRAI--IGIRPEDVKLS----KDVIKDDSWILVGKGKVKVIGYQGGL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------