@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SA1114: (2016-03-22 )
MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQIKELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKNEFDNKIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN
Atome Classification :
(30 SA)
-.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160--.......170.......180.......190.......200.......210.-.-.....-------.220-------.-------.---------..---------...230....-...240.......250.......260--...---....-----.270.......-280.......290--------.......300...--
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-MYNGI
L
P
V
Y
K
ERGLT
S
H
D
V
V
F
K
L
R
K
I
L
K
TKKIGHTGTLDPEVA
G
V
L
P
VCIGN
A
T
R
V
S
D
Y
V
M
D
M
G
K
A
Y
E
A
T
V
SIGRSTTTEDQTGDTLETKGVHSADF
N
K
D
D
I
D
R
L
L
E
N
F
K
G
V
I
E
QIPP
M
Y
S
S
V
KV
N
G
K
K
L
Y
E
Y
ARNNE
T
V
ERPKRKV
N
I
K
DIGRISELDFKE--NE
C
H
F
K
I
R
V
I
CGKG
T
Y
I
R
T
L
A
T
DI
G
V
KLGF
P
A
H
M
S
K
L
T
RIESG
G
F
V
LK-DS-L-
T
L
E
Q
I
-------
K
E
L
H
-------
E
-------
Q
---------
D
S
---------
L
QNKL
F
P
L
E
Y-GLKGLPS
I
K
I
K
D
S
H
I
K
K
R
ILNGQKF---
N
K
N
---
E
FDN-----KIK
D
Q
I
V
F
IDD-DSE
K
V
L
A
I
Y
M
VHP--------TKESEIKPKKVFN--
49
Fugue
93.01
35%
-76
- C4 -
1R3E
3
TRUB_THEMA
A:
[1-309]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
E
C
N
V
---
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
I
F
K
I
W
D
V
N
I
-------
E
G
R
D
V
S
F
R
V
E
V
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
------------------
A
-------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
-
T
K
M
I
L
N
G
S
Q
I
HLE
M
L
K
---
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
A
E
A
E
R
NSSFLETL
R
K
E
R
V
L
T
L
R
K
V
F
N
TR
29
HHSearch
88.83
34%
-84
* C4 *
1R3E
3
TRUB_THEMA
A:
[1-287]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
E
C
---
N
V
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
I
F
K
I
W
D
V
N
I
E
---
G
----
R
D
V
S
F
R
V
E
V
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
P
---------------------------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
-
T
K
M
I
L
N
G
S
Q
I
---
H
L
E
---
M
L
K
E
WDGF-
K
K
-
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
A
E
A
E
R
--------
N
--------------
6
PsiBlast_PDB
87.99
33%
-79
- C4 -
1R3E
3
TRUB_THEMA
A:
[1-281]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
---
E
C
N
V
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
---
I
F
K
I
W
D
V
N
I
E
G
--
R
D
V
S
F
R
V
E
V
--
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
------------------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
T
K
M
-
I
L
N
G
S
Q
I
---
H
L
E
MLK
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
----------------------------
5
PsiBlast_PDB
87.60
33%
-78
- C4 -
1ZE2
2
TRUB_THEMA
A:
[1-285]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
---
E
C
N
V
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
---
I
F
K
I
W
D
V
N
I
E
G
--
R
D
V
S
F
R
V
E
V
--
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
------------------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
T
K
M
-
I
L
N
G
S
Q
I
---
H
L
E
MLK
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
----------------------------
48
Fugue
87.31
31%
-76
- C4 -
1K8W
11
TRUB_ECOLI
A:
[22-324]
M
D
I
N
G
V
L
L
L
D
K
P
Q
G
M
S
S
N
D
A
L
Q
K
V
K
R
I
Y
N
A
N
R
A
G
H
T
G
A
L
D
P
L
A
T
G
M
L
P
I
C
L
G
E
A
T
K
F
S
Q
Y
L
L
D
S
D
K
R
Y
R
V
I
A
R
L
G
Q
R
T
D
T
S
D
A
D
G
Q
I
V
E
E
R
---
P
V
T
F
S
A
E
Q
L
A
A
A
L
D
T
F
R
G
D
I
E
Q
I
P
S
M
Y
S
A
L
K
Y
Q
G
K
K
L
Y
E
Y
A
R
Q
G
I
E
V
P
R
E
A
R
P
I
T
V
Y
E
L
L
F
I
R
H
E
G
N
-------
E
L
E
L
E
I
H
C
S
K
G
T
Y
I
R
T
I
I
D
D
L
G
E
K
L
G
C
G
A
H
V
I
Y
L
R
R
L
A
V
S
K
Y
P
V
E
-
R
M
-
V
-
T
L
E
H
L
-------
R
E
L
V
-------
E
-------
Q
---------
A
E
Q
Q
DIP
A
A
E
L
L
D
P
L
L
M
P
M
D
S
-
P
A
S
D
Y
P
V
V
N
L
-
P
L
T
S
S
V
Y
F
K
N
G
N
P
V
---
R
T
S
---
G
A
P
L
-----
E
--
G
L
V
R
V
T
E
G
-
E
N
G
K
F
I
G
M
G
E
I
----------
D
D
E
G
R
V
A
P
R
R
L
V
V
E-
7
PsiBlast_PDB
86.66
33%
-76
- C4 -
2AB4
2
TRUB_THEMA
A:
[1-285]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
F
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
---
E
C
N
V
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
---
I
F
K
I
W
D
V
N
I
E
G
--
R
D
V
S
F
R
V
E
V
--
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
------------------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
T
K
M
-
I
L
N
G
S
Q
I
---
H
L
E
MLK
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
----------------------------
28
HHSearch
86.50
32%
-80
- C4 -
1K8W
11
TRUB_ECOLI
A:
[23-322]
-
D
I
N
G
V
L
L
L
D
K
P
Q
G
M
S
S
N
D
A
L
Q
K
V
K
R
I
Y
N
A
N
R
A
G
H
T
G
A
L
D
P
L
A
T
G
M
L
P
I
C
L
G
E
A
T
K
F
S
Q
Y
L
L
D
S
D
K
R
Y
R
V
I
A
R
L
G
Q
R
T
D
T
S
D
A
D
G
Q
I
V
E
E
R
P
V
---
T
F
S
A
E
Q
L
A
A
A
L
D
T
F
R
G
D
I
E
Q
I
P
S
M
Y
S
A
L
K
Y
Q
G
K
K
L
Y
E
Y
A
R
Q
G
I
E
V
P
R
E
A
R
P
I
T
V
Y
E
L
L
F
I
R
H
E
---
G
----
N
E
L
E
L
E
I
H
C
S
K
G
T
Y
I
R
T
I
I
D
D
L
G
E
K
L
G
C
G
A
H
V
I
Y
L
R
R
L
A
V
S
K
Y
P
V
E
-
R
M
-
V
-
T
L
E
H
L
-------
R
E
L
V
-------
E
-------
Q
A
E
Q
Q
DIP
A
A
E
L
---------
L
D
P
L
L
M
P
M
D
S
-
P
A
S
D
Y
P
V
V
N
L
P
L
T
S
-
S
V
Y
F
K
N
G
N
P
V
---
R
T
S
---
G
A
P
-------
L
-
E
G
L
V
R
V
T
E
G
E
N
G
K
F
I
G
M
G
E
I
D
D
--------
E
--
G
R
V
A
P
R
R
L
V
---
4
PsiBlast_PDB
86.39
33%
-71
- C4 -
1ZE1
1
TRUB_THEMA
A:
[1-277]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
---
E
C
N
V
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
---
I
F
K
I
W
D
V
N
I
E
G
--
R
D
V
S
F
R
V
E
V
--
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
------------------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
T
K
M
-
I
L
N
G
S
Q
I
---
H
L
E
MLK
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
----------------------------
23
PsiBlast_CBE
84.58
33%
-69
- C4 -
1ZE1
1
TRUB_THEMA
B:
[1-277]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
---
E
C
N
V
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
---
I
F
K
I
W
D
V
N
I
E
G
--
R
D
V
S
F
R
V
E
V
--
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
------------------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
T
K
M
-
I
L
N
G
S
Q
I
---
H
L
E
M
L
K
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
----------------------------
21
PsiBlast_CBE
83.97
33%
-77
- C4 -
1ZE1
1
TRUB_THEMA
D:
[1-277]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
---
E
C
N
V
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
------------------------
P
K
R
V
K
---
I
F
K
I
W
D
V
N
I
E
G
--
R
D
V
S
F
R
V
E
V
--
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
------------------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
T
K
M
-
I
L
N
G
S
Q
I
---
H
L
E
MLK
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
----------------------------
22
PsiBlast_CBE
83.57
33%
-70
- C4 -
1ZE1
1
TRUB_THEMA
C:
[1-277]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
W
V
K
M
R
L
G
L
I
T
E
T
F
D
I
T
G
E
V
V
E
E
R
---
E
C
N
V
T
E
E
E
I
R
E
A
I
F
S
F
V
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
---
I
F
K
I
W
D
V
N
I
E
G
--
R
D
V
S
F
R
V
E
V
--
S
P
G
T
Y
I
R
S
L
C
M
D
I
G
Y
K
L
G
C
G
A
T
A
V
E
L
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
------------------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
T
K
M
-
I
L
N
G
S
Q
I
---
H
L
E
MLK
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
----------------------------
33
HHSearch
83.52
33%
-118
- C4 -
2AUS
2
TRUB_PYRAB
C:
[45-302]
--
Q
Y
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
R
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
R
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
H
G
--------------------
D
V
P
E
D
K
I
R
A
V
M
K
E
F
E
G
E
I
I
Q
R
-----------------------------
T
R
K
V
Y
Y
I
E
I
L
E
I
D
---
G
----
R
D
V
L
F
R
V
G
V
E
A
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
A
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
L
V
-
T
L
H
D
L
-------
V
D
Y
Y
-------
H
F
W
KEDGI
E
---------
E
Y
---------
I
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
I
W
I
K
D
S
A
-
V
A
A
V
A
H
G
A
N
L
---
T
V
P
---
G
I
V
K
L
N
A
GI
K
K
-
G
D
L
V
A
I
M
T
-
L
K
D
E
L
V
A
L
G
K
A
-------------------------
31
HHSearch
83.10
34%
-108
- C4 -
2APO
2
TRUB_METJA
A:
[65-322]
--
K
Y
G
V
V
V
V
D
K
P
R
G
P
T
S
H
E
V
S
T
W
V
K
K
I
L
N
L
D
K
A
G
H
G
G
T
L
D
P
K
V
T
G
V
L
P
V
A
L
E
R
A
T
K
T
I
P
M
W
H
I
P
P
K
E
Y
V
C
L
M
H
L
H
R
D
--------------------
A
S
E
E
D
I
L
R
V
F
K
E
F
T
G
R
I
Y
Q
R
----------------------------
R
I
R
K
I
H
E
L
E
L
L
D
K
D
---
G
----
K
D
V
L
F
R
V
K
C
Q
S
G
T
Y
I
R
K
L
C
E
D
I
G
E
A
L
G
T
S
A
H
M
Q
E
L
R
R
T
K
S
G
C
F
E
E
K
-
D
A
-
V
-
Y
L
Q
D
L
-------
L
D
A
Y
V
F
W
K
EDG
D
-------
E
---------
E
E
---------
L
R
R
V
I
K
P
M
E
Y
-
G
L
R
H
L
K
K
V
V
V
K
D
S
A
-
V
D
A
I
C
H
G
A
D
V
---
Y
V
R
---
G
I
A
K
L
S
K
GI
G
K
-
G
E
T
V
L
V
E
T
-
L
K
G
E
A
V
A
V
G
K
A
L
------------------------
32
HHSearch
82.47
30%
-97
- C4 -
3U28
-
CBF5_YEAST
A:
[58-318]
--
S
S
G
V
I
N
L
D
K
P
S
N
P
S
S
H
E
V
V
A
W
I
K
R
I
L
R
C
E
K
T
G
H
S
G
T
L
D
P
K
V
T
G
C
L
I
V
C
I
D
R
A
T
R
L
V
K
S
Q
Q
G
A
G
K
E
Y
V
C
I
V
R
L
H
D
A
L
-------------------
K
D
E
K
D
L
G
R
S
L
E
N
L
T
G
A
L
F
Q
R
P
P
-----
K
R
Q
-----------------
L
R
V
R
T
I
Y
E
S
N
L
I
E
F
D
---
N
--
K
R
N
L
G
V
F
W
A
S
C
E
A
G
T
Y
M
R
T
L
C
V
H
L
G
M
L
L
G
V
G
G
H
M
Q
E
L
R
R
V
R
S
G
A
L
S
E
N
D
N
M
-
V
-
T
L
H
D
V
-------
M
D
A
Q
W
V
Y
D
N
TR
D
-------
E
---------
S
Y
---------
L
R
S
I
I
Q
P
L
E
T
-
L
L
V
G
Y
K
R
I
V
V
K
D
S
A
-
V
N
A
V
C
Y
G
A
K
L
---
M
I
P
---
G
L
L
R
Y
E
E
GI
E
L
-
Y
D
E
I
V
L
I
T
-
T
K
G
E
A
I
A
V
A
I
A
-------------------------
3
PsiBlast_PDB
77.70
37%
-74
- C4 -
1ZL3
3
TRUB_ECOLI
A:
[25-243]
---
N
G
V
L
L
L
D
K
P
Q
G
M
S
S
N
D
A
L
Q
K
V
K
R
I
Y
N
A
N
R
A
G
H
T
G
A
L
N
P
L
A
T
G
M
L
P
I
C
L
G
E
A
T
K
F
S
Q
Y
L
L
D
S
D
K
R
Y
R
V
I
A
R
L
G
Q
R
T
D
T
S
D
A
D
G
Q
I
V
E
E
R
P
V
---
T
F
S
A
E
Q
L
A
A
A
L
D
T
F
R
G
D
I
E
Q
I
P
S
M
Y
S
A
L
K
Y
Q
G
K
K
L
Y
E
Y
A
R
Q
G
I
E
V
P
R
E
A
R
P
I
T
V
Y
E
L
-----
L
F
I
R
H
--
E
G
N
E
L
E
L
E
I
H
C
S
K
G
T
Y
I
R
T
I
I
D
D
L
G
E
K
L
G
C
G
A
H
V
I
Y
L
R
R
L
A
V
S
K
Y
P
V
E
-
R
M
-
V
-
T
L
E
H
L
-------
R
E
L
V
-------
E
-------
Q
---------
A
E
---------
Q
Q
D
---------------------------------------------------------------------------------------------------
30
HHSearch
76.85
30%
-89
- C4 -
1SGV
-
TRUB_MYCTU
A:
[5-282]
--
G
P
G
I
V
V
I
D
K
P
A
G
M
T
S
H
D
V
V
G
R
C
R
R
I
F
A
T
R
R
V
G
H
A
G
T
L
D
P
M
A
T
G
V
L
V
I
G
I
E
R
A
T
K
I
L
G
L
L
T
A
A
P
K
S
Y
A
A
T
I
R
L
G
Q
T
T
S
T
E
D
A
E
G
Q
V
L
Q
S
V
P
A
K
--
H
L
T
I
E
A
I
D
A
A
M
E
R
L
R
G
E
I
----------------------------
L
E
A
R
P
I
R
I
D
R
F
E
L
L
A
A
R
---
R
RD
Q
L
I
D
I
D
V
E
I
D
C
S
S
G
T
Y
I
R
A
L
A
R
D
L
G
D
A
L
G
V
G
G
H
V
T
A
L
R
R
T
R
V
G
R
F
E
L
D
-
Q
A
-
R
-
S
L
D
D
L
-------
A
E
R
P
--------------------------------------
A
L
S
L
S
L
D
E
A
C
L
L
M
F
A
R
R
D
L
T
A
A
E
-
A
S
A
A
A
N
G
R
S
L
---
P
A
V
---
G
I
----------
D
G
V
Y
A
A
C
D
-
A
D
G
R
V
I
A
L
L
R
D
E
G
--------
S
--------------
10
PsiBlast_PDB
76.80
32%
-122
- C4 -
2HVY
1
TRUB_PYRFU
A:
[47-260]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
P
P
L
---------------------------
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
18
PsiBlast_PDB
76.59
32%
-120
- C4 -
3MQK
2
TRUB_PYRFU
A:
[40-253]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
P
P
L
R
S
A
V
--------------------
K
R
R
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
1
PsiBlast_PDB
76.53
37%
-73
- C4 -
1K8W
8
TRUB_ECOLI
A:
[25-243]
---
N
G
V
L
L
L
D
K
P
Q
G
M
S
S
N
D
A
L
Q
K
V
K
R
I
Y
N
A
N
R
A
G
H
T
G
A
L
D
P
L
A
T
G
M
L
P
I
C
L
G
E
A
T
K
F
S
Q
Y
L
L
D
S
D
K
R
Y
R
V
I
A
R
L
G
Q
R
T
D
T
S
D
A
D
G
Q
I
V
E
E
R
P
V
---
T
F
S
A
E
Q
L
A
A
A
L
D
T
F
R
G
D
I
E
Q
I
P
S
M
Y
S
A
L
K
Y
Q
G
K
K
L
Y
E
Y
A
R
Q
G
I
E
V
P
R
E
A
R
P
I
T
V
Y
E
L
-----
L
F
I
R
H
--
E
G
N
E
L
E
L
E
I
H
C
S
K
G
T
Y
I
R
T
I
I
D
D
L
G
E
K
L
G
C
G
A
H
V
I
Y
L
R
R
L
A
V
S
K
Y
P
V
E
-
R
M
-
V
-
T
L
E
H
L
-------
R
E
L
V
-------
E
-------
Q
---------
A
E
---------
Q
Q
D
---------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
75.60
32%
-114
- C4 -
3HJW
2
TRUB_PYRFU
A:
[40-253]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
P
P
L
R
S
A
V
--------------------
K
R
R
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
11
PsiBlast_PDB
75.59
32%
-115
- C4 -
3HAX
5
TRUB_PYRFU
A:
[47-260]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
P
P
L
R
S
A
V
--------------------
K
R
R
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
25
PsiBlast_CBE
75.55
32%
-120
- C4 -
3HJY
3
TRUB_PYRFU
A:
[40-253]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
P
P
L
---------------------------
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
13
PsiBlast_PDB
75.14
32%
-117
- C4 -
3LWO
1
TRUB_PYRFU
A:
[47-260]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
------------------------------
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
14
PsiBlast_PDB
75.13
32%
-122
- C4 -
3LWP
1
TRUB_PYRFU
A:
[47-260]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
------------------------------
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
26
PsiBlast_CBE
74.27
31%
-114
- C4 -
2RFK
1
TRUB_PYRFU
A:
[43-256]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
A
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
P
P
L
R
S
A
V
--------------------
K
R
R
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
12
PsiBlast_PDB
74.20
32%
-110
- C4 -
3HAY
1
TRUB_PYRFU
A:
[47-260]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
P
P
L
R
S
A
V
--------------------
K
R
R
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
17
PsiBlast_PDB
74.10
32%
-118
- C4 -
3LWV
1
TRUB_PYRFU
A:
[47-260]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
------------------------------
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
16
PsiBlast_PDB
73.83
32%
-119
- C4 -
3LWR
1
TRUB_PYRFU
A:
[47-260]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
------------------------------
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
15
PsiBlast_PDB
73.68
32%
-113
- C4 -
3LWQ
1
TRUB_PYRFU
A:
[47-260]
----
G
V
I
N
L
D
K
P
P
G
P
T
S
H
E
V
V
A
W
I
K
K
I
L
N
L
E
K
A
G
H
G
G
T
L
D
P
K
V
S
G
V
L
P
V
A
L
E
K
A
T
R
V
V
Q
A
L
L
P
A
G
K
E
Y
V
A
L
M
H
L
--------------------
H
G
D
V
P
E
D
K
I
I
Q
V
M
K
E
F
E
G
E
I
I
Q
R
------------------------------
L
R
T
R
K
V
Y
Y
I
E
V
L
E
I
E
G
--
R
D
V
L
F
R
V
G
V
E
A
--
G
T
Y
I
R
S
L
I
H
H
I
G
L
A
L
G
V
G
A
H
M
S
E
L
R
R
T
R
S
G
P
F
K
E
D
-
E
T
-
L
I
T
L
H
D
L
V
D
Y
Y
Y
F
W
K
E
D
G
-------
I
-------
E
---------
E
Y
---------
F
R
K
A
I
Q
P
M
E
K
-
A
V
E
H
L
P
K
V
W
I
K
D
S
A
V
----------------------------------------------------------------------------
24
PsiBlast_CBE
70.06
33%
-74
- C4 -
1ZE2
2
TRUB_THEMA
B:
[1-296]
-
M
K
H
G
I
L
V
A
Y
K
P
K
G
P
T
S
H
D
V
V
D
E
V
R
K
K
L
K
T
R
K
V
G
H
G
G
T
L
D
P
F
A
C
G
V
L
I
I
G
V
N
Q
G
T
R
I
L
E
F
Y
K
D
L
K
K
V
Y
-------------------------------------------
G
E
Y
D
Q
V
P
P
A
Y
S
A
K
K
Y
K
G
E
R
L
Y
K
L
A
R
E
G
K
I
I
N
L
P
P
K
R
V
K
---
I
F
K
I
--------------
R
V
E
V
--
S
P
G
T
Y
I
R
-------------------
V
R
E
S
V
G
P
H
T
I
E
-
E
S
-
L
-
N
V
F
E
A
-------
A
------------------
P
---------
E
E
---------
I
E
N
R
I
I
P
L
E
K
-
C
L
E
W
L
P
R
V
V
V
H
Q
E
S
T
K
M
-
I
L
N
G
S
Q
I
---
H
L
E
MLK
E
W
D
G
-----
F
K
K
G
E
V
V
R
V
F
N
-
E
E
G
R
L
L
A
L
----------------------------