@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SA1138: (2016-03-22 )
MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGSGIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEALASISSVAKVTLKTCTDNANGNEIYVENGEILNHKPAKAKKGTDILVESLFYNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNGSGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAKPEHSRSNKHYISIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLYSFEQQKIEFEQRQNTENNQEKTFSSEESNSKSFMAENQNDEIVIKEDSYNPFVTKTSESLITDDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNEDASVQNYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQYKNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEKKVDIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGRPIIINFSKYELEKLFKRVM
Atome Classification :
(22 SA)
----.........10........-20---........30........40........50........60........70........80.......---.90........100.......110...-.-..-.-120.-...-.--..-130-.......----.140.......150......-.160........170.......180.....---.---.190-----.-----.....--.---200-.........210.......220...-------------.------------....-----------------230--.........240-.---.......250.-.......260.......270.......280.......290.......300.......310----.......320...-....330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----MG
K
I
K
E
L
Q
T
S
L
A
NKIAA
G
E
-
V
V---E
R
P
S
S
V
V
K
E
L
L
E
N
A
I
DAGA
T
E
I
S
I
E
V
EESG
V
Q
S
I
R
V
VDNGSGI
E
A
E
D
L
G
L
V
FHRHATSKLDQDED
L
F
---
H
I
R
TLGFR
G
E
A
L
A
S
I
S
S
V
A
K
V
T
L
K
TCT-D-NA-N-G
N
E
I
-
Y
V
E-N--GE-I-L-NHKPAKA----KK
G
T
D
I
L
V
E
S
L
FYNT
P
A
R
L
K
-
Y
I
K
-
S
L
Y
T
E
L
G
K
I
T
D
I
V
N
R
M
AMSHP
D
I
R
I
A
---
L
---ISDG-----
K
-----
T
M
L
ST--N---G---SG
R
T
N
E
V
M
A
E
I
Y
G
M
K
V
A
R
D
L
V
-
H
IS-------------G------------DTS
D
-----------------
Y
----
H
I
E
G
F
VAKPEH--S---RSNK
H
Y
I
S
-
I
F
-ING
R
Y
I
K
N
F
M
L
N
K
A
I
L
E
G
Y
H
T
L
L
TIGRF
P
I
C
Y
I
N
I
EM
D
P
I
L
V
DVNVHP
T
K
L
E
V
R
LS
K
E
E
Q
----
L
Y
Q
L
I
V
S
K
I
Q
E
A
F
-KD
R
I
L
IPKNNLDYVPKKN
K
V
L
Y
S
F
E
Q
Q
K
I
E
F
E
Q
RQNTENNQEKTFSSEESNSKSFMAENQND
E
I
V
I
KEDSYNPFVTKTSESLITDDESSGYNNT
R
E
K
D
E
D
Y
F
K
K
Q
Q
E
I
L
Q
E
M
D
Q
TFDSNEDASVQNYENKASDDYYDVNDIKGTKSKDPKRRI
P
Y
M
E
I
V
GQVH
G
T
Y
I
I
A
QNEF
G
M
Y
M
I
D
Q
H
A
A
Q
E
R
I
K
Y
E
Y
F
R
D
K
I
G
E
V
T
N
E
V
Q
D
L
L
I
P
L
T
F
HFSKD
E
Q
L
V
I
D
Q
Y
K
N
E
L
Q
Q
V
G
I
M
L
E
HFGGH
D
Y
I
VSSYPVWF
P
K
D
E
V
E
E
I
I
K
D
M
I
E
L
I
L
E
EKKV
D
I
K
K
L
R
E
D
V
A
I
M
M
S
C
K
K
S
IKANH
Y
L
Q
K
H
E
M
S
D
L
I
D
Q
L
R
EAEDPFTCPHG
R
P
I
I
I
NF
S
K
Y
E
L
E
K
L
F
K
RVM
9
PsiBlast_PDB
90.26
40%
-85
- C1 -
1B63
4
MUTL_ECOLI
A:
[5-333]
-------
I
Q
V
L
P
P
Q
L
A
N
Q
I
A
A
G
E
-
V
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
E
-
G
--
R
D
-
M
N
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
VPE
G
G
Q
K
E
R
R
L
G
A
I
C
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
Y
C
Y
-
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
C
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
D
V
N
V
H
P
A
K
H
E
V
R
F
H
Q
S
R
L
V
H
D
F
I
Y
Q
G
V
L
S
V
L
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
89.76
39%
-83
- C1 -
1B63
4
MUTL_ECOLI
A:
[2-333]
----
H
M
P
I
Q
V
L
P
P
Q
L
A
N
Q
I
A
A
G
E
-
V
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
-
A
E
Q
Q
-
E
-
A
W
Q
A
-
Y
A
E
-
G
--
R
D
-
M
-
N
V
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
A
VP
E
---
G
G
Q
K
E
R
R
L
G
A
I
C
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
T-
T
---
P
A
L
A
E
I
Q
Y
-
C
Y
-
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
C
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
D
V
N
V
H
P
A
K
H
E
V
R
F
H
Q
S
R
L
----
V
H
D
F
I
Y
Q
G
V
L
S
V
L
-
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
89.40
39%
-83
- C1 -
1NHJ
3
MUTL_ECOLI
A:
[5-333]
-------
I
Q
V
L
P
P
Q
L
A
N
Q
I
A
A
G
E
-
V
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
P
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
E
-
G
--
R
D
-
M
N
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
VPE
G
G
Q
K
E
R
R
L
G
A
I
C
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
Y
C
Y
-
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
C
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
D
V
N
V
H
P
A
K
H
E
V
R
F
H
Q
S
R
L
V
H
D
F
I
Y
Q
G
V
L
S
V
L
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
88.79
40%
-87
- C1 -
1NHI
5
MUTL_ECOLI
A:
[5-333]
-------
I
Q
V
L
P
P
Q
L
A
N
Q
I
A
A
G
E
-
V
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
E
-
G
--
R
D
-
M
N
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
V
P
E
G
G
Q
K
E
R
R
L
G
A
I
C
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
Y
C
Y
-
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
C
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
D
V
N
V
H
P
A
K
H
E
V
R
F
H
Q
S
R
L
V
H
D
F
I
Y
Q
G
V
L
S
V
L
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
88.75
40%
-86
- C1 -
1NHH
8
MUTL_ECOLI
A:
[5-333]
-------
I
Q
V
L
P
P
Q
L
A
N
Q
I
A
A
G
E
-
V
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
E
-
G
--
R
D
-
M
N
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
V
P---
Q
K
E
R
R
L
G
A
I
C
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
Y
C
Y
-
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
C
E
D
K
L
G
--
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
D
V
N
V
H
P
A
K
H
E
V
R
F
H
Q
S
R
L
V
H
D
F
I
Y
Q
G
V
L
S
V
L
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
Fugue
88.71
38%
-89
- C1 -
1B63
4
MUTL_ECOLI
A:
[1-333]
---S
H
M
P
I
Q
V
L
P
P
Q
L
A
N
Q
I
A
A
G
-
E
V
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
-
A
-
E
Q
-
Q
E
A
W
Q
A
-
Y
A
E
-
G
RD
M
N
-
V
---
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
-R
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
-------GKIV
R
Q
Y
R
A
V
--
P
---
E
---
G
G
Q
K
E
R
R
L
G
A
I
C
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
----HTT
P
A
L
A
E
I
Q
Y
-
C
Y
-
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
C
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
D
V
N
V
H
P
A
K
H
E
V
R
F
H
Q
S
R
L
----
V
H
D
F
I
Y
Q
G
V
L
S
V
L
-
Q
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
78.85
40%
-89
- C1 -
5AKD
-
?
C:
[40-351]
-------------------------
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
S
G
I
K
K
D
E
L
A
L
A
L
A
------
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
----------
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
VPE
G
G
Q
K
E
R
R
L
G
A
I
L
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
-
Y
F
Y
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
Y
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
---------------
S
R
L
VHDF
I
Y
Q
G
V
L
S
V
L
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
78.68
40%
-87
- C1 -
5AKC
-
?
C:
[40-351]
-------------------------
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
S
G
I
K
K
D
E
L
A
L
A
L
A
------
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
----------
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
VPE
G
G
Q
K
E
R
R
L
G
A
I
L
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
-
Y
F
Y
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
Y
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
---------------
S
R
L
VHDF
I
Y
Q
G
V
L
S
V
L
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
78.65
40%
-85
- C1 -
5AKB
-
?
C:
[40-351]
-------------------------
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
S
G
I
K
K
D
E
L
A
L
A
L
A
------
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
----------
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
VPE
G
G
Q
K
E
R
R
L
G
A
I
L
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
-
Y
F
Y
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
Y
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
---------------
S
R
L
VHDF
I
Y
Q
G
V
L
S
V
L
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
77.88
40%
-3
- C- -
1B62
2
MUTL_ECOLI
A:
[9-338]
-------
I
Q
V
L
P
P
Q
L
A
N
Q
I
A
A
G
E
-
V
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
E
-
G
--
R
D
-
M
N
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
V
P
E
G
G
Q
K
E
R
R
L
G
A
I
C
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
Y
C
Y
-
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
C
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
D
V
N
V
H
P
-
K
H
E
V
R
F
H
Q
S
R
L
V
H
D
F
I
Y
Q
G
V
L
S
V
L
Q
Q
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
77.67
27%
-89
- C1 -
3H4L
2
PMS1_YEAST
A:
[13-363]
--------------
D
V
H
R
I
T
S
G
Q
-
V
I
---
T
D
L
T
T
A
V
K
E
L
V
D
N
S
I
D
A
N
A
N
Q
I
E
I
I
F
K
D
Y
G
L
E
S
I
E
C
S
D
N
G
D
G
I
D
P
S
N
Y
E
F
L
A
L
K
H
Y
T
---------
A
---
K
V
Q
T
L
G
F
R
G
E
A
L
S
S
L
C
G
I
A
K
L
S
V
I
T
T
T
-
S
-
P
P
-
K
-
A
D
K
L
-
E
Y
D
-
M
V-
G
H
-
I
-
T
-
S
K
T
T
T
S
R
----
N
K
G
T
T
V
L
V
S
Q
L
F
H
N
L
P
V
R
Q
K
-
E
F
S
K
T
F
K
R
Q
F
T
K
C
L
T
V
I
Q
G
Y
A
I
I
N
A
A
I
K
F
S
---
V
---
W
N
I
T
PK
G
K
K
N
-----
L
I
L
S
T
--
M
---
R
---
N
S
S
M
R
K
N
I
S
S
V
F
G
A
G
G
M
R
G
L
E
-
E
V
D
-------------
L
V
L
D
LNPFKNRML-
D
Y
K
-----------------
I
----
R
V
K
G
Y
I
S
Q
N
S
F
GC
G
---
R
N
S
K
D
R
Q
F
-
I
Y
-
V
N
K
R
P
V
E
Y
S
T
L
L
K
C
C
N
E
V
Y
K
T
F
-
N
N
V
Q
F
P
A
V
F
L
N
L
E
L
P
M
S
L
I
D
V
N
V
T
P
D
K
R
V
I
L
L
H
N
E
R
A
----
V
I
D
I
F
K
T
T
L
S
D
Y
Y
-
N
R
Q
E
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
77.21
27%
-89
- C1 -
3H4L
2
PMS1_YEAST
A:
[13-366]
--------------
D
V
H
R
I
T
S
G
Q
-
V
I
---
T
D
L
T
T
A
V
K
E
L
V
D
N
S
I
D
A
N
A
N
Q
I
E
I
I
F
K
D
Y
G
L
E
S
I
E
C
S
D
N
G
D
G
I
D
P
S
N
Y
E
F
L
A
L
K
H
Y
T
---------
A
---
K
V
Q
T
L
G
F
R
G
E
A
L
S
S
L
C
G
I
A
K
L
S
V
I
T
T
T
-
S
-
P
P
-
K
-
A
D
K
L
E
Y
D
M
-
V
--
G
H
-
I
-
T
-
S
K
T
T
T
S
R
----
N
K
G
T
T
V
L
V
S
Q
L
F
H
N
L
P
V
R
Q
K
E
F
S
K
-
T
F
K
R
Q
F
T
K
C
L
T
V
I
Q
G
Y
A
I
I
N
A
A
I
K
F
S
V
W
N
I
---
T
P
K
G
-----
K
K
N
---
L
I
L
S
T
M
R
N
---
S
---
S
M
R
K
N
--
I
S
S
V
F
G
A
G
G
M
R
G
L
E
-
E
V
D
L
V
L
D
LNPFKNRML-----------------------------------DY
K
I
R
V
K
G
Y
I
S
Q
N
S
F
GC
G
---
R
N
S
K
D
R
Q
F
-
I
Y
-
V
N
K
R
P
V
E
Y
S
T
L
L
K
C
C
N
E
V
Y
K
T
F
N
N
V
-
Q
F
P
A
V
F
L
N
L
E
L
P
M
S
L
I
D
V
N
V
T
P
D
K
R
V
I
L
L
H
N
E
R
A
----
V
I
D
I
F
K
T
T
L
S
D
Y
Y
N
R
Q
E
L
A
L
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
77.06
29%
-101
- C1 -
1H7U
2
PMS2_HUMAN
A:
[31-363]
------------------------
V
V
---
L
S
L
S
T
A
V
K
E
L
V
E
N
S
L
D
A
G
A
T
N
I
D
L
K
L
K
D
Y
G
V
D
L
I
E
V
S
D
N
G
C
G
V
E
E
E
N
F
E
G
L
T
L
K
------------------------
G
E
A
L
S
S
L
C
A
L
S
D
V
T
I
S
T
C
H
-
A
-
S
A
-
K
V
G
T
R
L
-
M
F
D
H
N
--
G
K
-
I
-
I
-
Q
K
T
P
Y
P
R
----
P
R
G
T
T
V
S
V
Q
Q
L
F
S
T
L
P
V
R
H
K
E
F
Q
R
-
N
I
K
K
E
Y
A
K
M
V
Q
V
L
H
A
Y
C
I
I
S
A
G
I
R
V
S
---
C
T
N
Q
L
G
Q
G
-----
K
R
Q
---
P
V
V
C
T
--
G
---
G
---
S
P
S
I
K
E
N
I
G
S
V
F
G
Q
K
Q
L
Q
S
L
I
P
F
V
Q
-------------
L
------------
P
P
S
D
S
V
C
E
E
Y
GLSCSDALHNL
F
----
Y
I
S
G
F
I
S
Q
C
T
H
GV
G
---
R
S
S
T
D
R
Q
F
-
F
F
-
I
N
R
R
P
C
D
P
A
K
V
C
R
L
V
N
E
V
Y
H
-
M
Y
N
R
H
Q
Y
P
F
V
V
L
N
I
S
V
D
S
E
C
V
D
I
N
------
Q
I
L
L
Q
E
E
K
L
----
L
L
A
V
L
K
T
S
L
I
G
M
F
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
76.16
29%
-99
- C1 -
1EA6
2
PMS2_HUMAN
A:
[27-363]
-------------------
C
S
G
Q
-
V
V
---
L
S
L
S
T
A
V
K
E
L
V
E
N
S
L
D
A
G
A
T
N
I
D
L
K
L
K
D
Y
G
V
D
L
I
E
V
S
D
N
G
C
G
V
E
E
E
N
F
E
G
L
T
L
--------------------------
E
A
L
S
S
L
C
A
L
S
D
V
T
I
S
T
C
H
-
A
-
S
A
-
K
V
G
T
R
L
-
M
F
D
H
N
--
G
K
-
I
-
I
-
Q
K
T
P
Y
P
R
----
P
R
G
T
T
V
S
V
Q
Q
L
F
S
T
L
P
V
R
H
K
E
F
Q
R
-
N
I
K
K
E
Y
A
K
M
V
Q
V
L
H
A
Y
C
I
I
S
A
G
I
R
V
S
---
C
T
N
Q
L
G
Q
G
-----
K
RQ---
P
V
V
C
T
--
G
---
G
---
S
P
S
I
K
E
N
I
G
S
V
F
G
Q
K
Q
L
Q
S
L
I
P
F
V
Q
-------------
L
------------
P
P
S
D
S
V
C
E
E
Y
GLSCSDALHNL
F
----
Y
I
S
G
F
I
S
Q
C
T
H
GV
G
---
R
S
S
T
D
R
Q
F
-
F
F
-
I
N
R
R
P
C
D
P
A
K
V
C
R
L
V
N
E
V
Y
H
-
M
Y
N
R
H
Q
Y
P
F
V
V
L
N
I
S
V
D
S
E
C
V
-----------
L
L
Q
E
E
K
L
----
L
L
A
V
L
K
T
S
L
I
G
M
F
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
75.80
40%
-86
- C1 -
1BKN
-
MUTL_ECOLI
A:
[20-331]
-------------------------
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
------
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
A
E
-
Q
Q
-
E
-
A
W
Q
A
-
Y
A
----------
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
---------------
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
V
P
E
G
G
Q
K
E
R
R
L
G
A
I
C
G
T
A
F
L
E
Q
A
L
-
A
I
E
-------------
W
------------
Q
H
G
D
-----------------
L
----
T
L
R
G
W
V
A
D
P
N
H
--
T
---
T
P
A
L
A
E
I
Q
Y
C
Y
-
V
N
G
R
M
M
R
D
R
L
I
N
H
A
I
R
Q
A
C
E
D
K
L
G
A
D
Q
Q
P
A
F
V
L
Y
L
E
I
D
P
H
Q
V
---------------
S
R
L
V
H
D
F
I
Y
Q
G
V
L
S
V
L
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
73.89
62%
-121
- C2 -
3GAB
-
MUTL_BACSU
A:
[435-624]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
V
P
I
M
Y
P
I
G
Q
M
H
G
T
Y
I
L
A
Q
N
E
N
G
L
Y
I
I
D
Q
H
A
A
Q
E
R
I
K
Y
E
Y
F
R
E
K
V
G
E
--
P
E
V
Q
E
M
I
V
P
L
T
F
H
Y
S
T
N
E
A
L
I
I
E
Q
H
K
Q
E
L
E
S
V
G
V
F
L
E
S
F
G
S
N
S
Y
I
V
R
C
H
P
A
W
F
P
K
G
E
E
A
E
L
I
E
E
I
I
Q
Q
V
L
D
S
K
N
I
D
I
K
K
L
R
E
E
A
A
I
M
M
S
C
K
-----
N
R
H
L
R
N
D
E
I
K
A
L
L
D
D
L
R
S
T
S
D
P
F
T
C
P
H
G
R
P
I
I
I
H
H
S
T
Y
E
M
E
K
M
F
K
---
21
PsiBlast_CBE
73.31
62%
-124
- C2 -
3KDK
2
B:
[5-194]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
V
P
I
M
Y
P
I
G
Q
M
H
G
T
Y
I
L
A
Q
N
E
N
G
L
Y
I
I
D
Q
H
A
A
Q
E
R
I
K
Y
E
Y
F
R
E
K
V
G
E
V
E
P
E
V
Q
E
M
I
V
P
L
T
F
H
Y
S
T
N
E
A
L
I
I
E
Q
H
K
Q
E
L
E
S
V
G
V
F
L
E
S
F
G
S
N
S
Y
I
V
R
C
H
P
A
W
F
P
K
G
E
E
A
E
L
I
E
E
I
I
Q
Q
V
L
D
S
K
N
I
D
I
K
K
L
R
E
E
A
A
I
M
M
S
C
K
------
R
H
L
R
N
D
E
I
K
A
L
L
D
D
L
R
S
T
S
D
P
F
T
C
P
H
G
R
P
I
I
I
H
H
S
T
Y
E
M
E
K
M
F
K
---
27
HHSearch
73.06
62%
-118
- C2 -
3KDG
-
MUTL_BACSU
A:
[435-627]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
V
P
I
M
Y
P
I
G
Q
M
H
G
T
Y
I
L
A
Q
N
E
N
G
L
Y
I
I
D
Q
H
A
A
Q
E
R
I
K
Y
E
Y
F
R
E
K
V
G
E
V
E
P
E
V
Q
E
M
I
V
P
L
T
F
H
Y
S
T
N
E
A
L
I
I
E
Q
H
K
Q
E
L
E
S
V
G
V
F
L
E
S
F
G
S
N
S
Y
I
V
R
C
H
P
A
W
F
P
K
G
E
E
A
E
L
I
E
E
I
I
Q
Q
V
L
D
S
K
N
I
D
I
K
K
L
R
E
E
A
A
I
M
M
S
C
K
G
----
N
R
H
L
R
N
D
E
I
K
A
L
L
D
D
L
R
S
T
S
D
P
F
T
C
P
H
G
R
P
I
I
I
H
H
S
T
Y
E
M
E
K
M
F
K
R
V
M
2
PsiBlast_PDB
73.05
62%
-118
- C2 -
3KDG
-
MUTL_BACSU
A:
[435-627]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
V
P
I
M
Y
P
I
G
Q
M
H
G
T
Y
I
L
A
Q
N
E
N
G
L
Y
I
I
D
Q
H
A
A
Q
E
R
I
K
Y
E
Y
F
R
E
K
V
G
E
V
E
P
E
V
Q
E
M
I
V
P
L
T
F
H
Y
S
T
N
E
A
L
I
I
E
Q
H
K
Q
E
L
E
S
V
G
V
F
L
E
S
F
G
S
N
S
Y
I
V
R
C
H
P
A
W
F
P
K
G
E
E
A
E
L
I
E
E
I
I
Q
Q
V
L
D
S
K
N
I
D
I
K
K
L
R
E
E
A
A
I
M
M
S
C
K
G
----
N
R
H
L
R
N
D
E
I
K
A
L
L
D
D
L
R
S
T
S
D
P
F
T
C
P
H
G
R
P
I
I
I
H
H
S
T
Y
E
M
E
K
M
F
K
R
V
M
46
Fugue
72.96
60%
-117
* C2 *
3KDG
-
MUTL_BACSU
A:
[433-627]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
D
R
V
P
I
M
Y
P
I
G
Q
M
H
G
T
Y
I
L
A
Q
N
E
N
G
L
Y
I
I
D
Q
H
A
A
Q
E
R
I
K
Y
E
Y
F
R
E
K
V
G
E
V
E
P
E
V
Q
E
M
I
V
P
L
T
F
H
Y
S
T
N
E
A
L
I
I
E
Q
H
K
Q
E
L
E
S
V
G
V
F
L
E
S
F
G
S
N
S
Y
I
V
R
C
H
P
A
W
F
P
K
G
E
E
A
E
L
I
E
E
I
I
Q
Q
V
L
D
S
K
N
I
D
I
K
K
L
R
E
E
A
A
I
M
M
S
C
K
----
G
N
R
H
L
R
N
D
E
I
K
A
L
L
D
D
L
R
S
T
S
D
P
F
T
C
P
H
G
R
P
I
I
I
H
H
S
T
Y
E
M
E
K
M
F
K
R
V
M
50
Fugue
62.54
46%
-50
- C1 -
1B63
4
MUTL_ECOLI
A:
[1-204]
SHMP
I
Q
---
V
L
P
P
Q
L
A
N
Q
I
A
A
G
----
E
V
V
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
A
II---
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
-
A
-
E
Q
Q
E
-
A
W
Q
A
-
Y
A
E
-
G
--
R
D
-
M
-
N
-
V
-
T
-
V
K
P
A
A
H
P
-
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
-R
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
---
V
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
Fugue
59.81
44%
-54
- C1 -
1B63
4
MUTL_ECOLI
A:
[3-218]
-----
M
P
I
Q
V
L
P
P
Q
L
A
N
Q
I
A
A
G
E
-
V
V
---
E
R
P
A
S
V
V
K
E
L
V
E
N
S
L
D
A
G
A
T
R
I
D
I
D
I
E
R
G
G
A
K
L
I
R
I
R
D
N
G
C
G
I
K
K
D
E
L
A
L
A
L
A
R
H
A
T
S
K
I
A
S
L
D
D
L
E
---
A
I
I
S
L
G
F
R
G
E
A
L
A
S
I
S
S
V
S
R
L
T
L
T
S
R
T
-
A
-
E
Q
-
Q
E
A
W
Q
A
-
Y
A
E
-
G
--
R
D
M
N
-
V
-
T
V
K
P
A
A
H
----
P
V
G
T
T
L
E
V
L
D
L
F
Y
N
T
P
A
R
R
K
-
F
L
R
-
T
E
K
T
E
F
N
H
I
D
E
I
I
R
R
I
A
L
A
R
F
D
V
T
I
N
---
L
---
S
H
N
G
-----
K
-----
I
V
R
Q
Y
--
R
---
A
---
V
P
E
G
G
Q
K
E
R
R
L
G
A
I
C
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------