@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA1331: (2016-03-24 )
MQKNILKSGIALSELGLGCMSLGTDLKKAEQIIDCAVENGITYFDTADMYDKGINESVVGKALLKYQQRDDIFIGTKVGNRLTKDGSTTWDPSKSYIKEAVKGSLKRLGIDHIDLYQLHGGTIDDPLDETISAFDELKQEGIIRAYGISSIRPNVIDYYLKHSQIETIMSQFNLIDNRPESLLDAIHNNDVKVLARGPVSKGLLTSNSVNVLDNKFKDGIFDYSHDELGETIASIKEIESNLSALTFSYLTSHDVLGSIIVGASSVDQLKENIENYHTKVGLDQIKTARARVKDLEYTNHLV

Atome Classification :

(20 SA) ......-...10.......-.--20--...-------...--...30--........40........50-.-------.-------.......60....--.-.-..70.......---.80..--..---...-.90..--......100.......110.......------------120...-----------------....130.......140.......150.-......---160--.------.--.......170-.......--.180------------.-........190.......200...---------...-.210.......-220----...----.---------------.---...230.....---..240-----.---------------........250.......260.......270.....-..280.......290.......300
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MQKNIL-KSGIALSELGLG-C--M---SLG-------TDL--KKAEQ--IIDCAVENGITYFDTADMY--D-------K-------GINESVVGKALLK--Y-Q-QRDDIFIGTKV---GNRLT--KD---GST-TWDPS--KSYIKEAVKGSLKRLGIDHIDLYQLH------------GGTIDD-----------------PLDETISAFDELKQEGIIRAYGISSIRP-NVIDYY---L----K------H--SQIETIMSQ--FNLIDNR--PE--------------S-LLDAIHNNDVKVLARGPVSKGLLT---------SNS-VNVLDNKFKDG-IF-----DYS----H---------------D---ELGETIASIKE---IES-------N---------------LSALTFSYLTSHDVLGSIIVGASSVDQLKENIENYH-TKVGLDQIKTARARVKDLEYTNHLV
1 PsiBlast_PDB 93.7252%-111 - C4 -1YNP ? A:[23-288] -KRQLG-TSDLHVSELGFG-C--M---SLG-------TDE--TKARR--IMDEVLELGINYLDTADLY--N-------Q-------GLNEQFVGKALKG------RRQDIILATKV-----------------------S--KAYIKEAVKDSLRRLQTDYIDLYQLH------------GGTIDD-----------------PIDETIEAFEELKQEGVIRYYGISSIRP-NVIKEY---L----K------R--SNIVSIMMQ--YSILDRR--PE--------------E-WFPLIQEHGVSVVVRGPVARGLLS---------RRP-L-----PEGEG-YL-----NYR----Y---------------D---ELKLLRESLP----TDR-------P---------------LHELALQYCLAHDVVATVAAGASSIDQVKANVQ-----------------------------
2 PsiBlast_PDB 91.4752%-107 - C4 -1YNQ ? A:[23-288] -KRQLG-TSDLHVSELGFG-C--M---SLG-------TDE--TKARR--IMDEVLELGINYLDTADLY--N-------Q-------GLNEQFVGKALKG------RRQDIILATKV-----------------W-WWDPS--KAYIKEAVKDSLRRLQTDYIDLYQLH------------GGTIDD-----------------PIDETIEAFEELKQEGVIRYYGISSIRP-NVIKEY---L----K------R--SNIVSIMMQ--YSILDRR--PE--------------E-WFPLIQEHGVSVVVRGPVARGLLS---------RRP-L-----PEGEG-YL-----NYR----Y---------------D---ELKLLRESLP----TDR-------P---------------LHELALQYCLAHDVVATVAAGASSIDQVKANVQ-----------------------------
22 PsiBlast_CBE 88.6952% -91 - C4 -1YNP ? B:[23-288] -KRQLG-TSDLHVSELGFG-C--M---SLG-------TDE--TKARR--IMDEVLELGINYLDTADLY--N-------Q-------GLNEQFVGKALKG------RRQDIILATKV---GNRFEQGKE---G-W-WWDPS--KAYIKEAVKDSLRRLQTDYIDLYQLH------------GGTIDD-----------------PIDETIEAFEELKQEGVIRYYGISSIRP-NVIKEY---L----K------R--SNIVSIMMQ--YSILDRR--PE--------------E-WFPLIQEHGVSVVVRGPVARGLLS---------RRP-L-----PEGEG-YL-----NYR----Y---------------D---ELKLLRESLP----TDR-------P---------------LHELALQYCLAHDVVATVAAGASSIDQVKANVQ-----------------------------
33 HHSearch 87.8850% -93 - C4 -1YNP ? A:[21-315] MKKRQLGTSDLHVSELGFG-C--M---SLG-------TDE--TKARR--IMDEVLELGINYLDTADLY--N-------Q-------GLNEQFVGKALKG------RRQDIILATKV-----------------------S--KAYIKEAVKDSLRRLQTDYIDLYQLH------------GGTIDD-----------------PIDETIEAFEELKQEGVIRYYGISSIRP-NVIKEY---L----K------R--SNIVSIMMQ--YSILDRR--PE--------------E-WFPLIQEHGVSVVVRGPVARGLLSR--------RPLPEGEGY--LN-------------------------------------YRYDELKLLRESLPTDR-------P---------------LHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEATPLTAEERQHIQKLAKAAVYEQH--
21 PsiBlast_CBE 87.5652% -93 - C4 -1YNQ ? B:[23-288] -KRQLG-TSDLHVSELGFG-C--M---SLG-------TDE--TKARR--IMDEVLELGINYLDTADLY--N-------Q-------GLNEQFVGKALKG------RRQDIILATKV---GNRFEQGKE---G-W-WWDPS--KAYIKEAVKDSLRRLQTDYIDLYQLH------------GGTIDD-----------------PIDETIEAFEELKQEGVIRYYGISSIRP-NVIKEY---L----K------R--SNIVSIMMQ--YSILDRR--PE--------------E-WFPLIQEHGVSVVVRGPVARGLLS---------RRP-L-----PEGEG-YL-----NYR----Y---------------D---ELKLLRESLP----TDR-------P---------------LHELALQYCLAHDVVATVAAGASSIDQVKANVQ-----------------------------
9 PsiBlast_PDB 72.1727% -89 - C4 -1LQA TAS_ECOLI A:[5-329] ---RIP-HSSLEVSTLGLG-T--M---TFG-------EQN--SEADAHAQLDYAVAQGINLIDVAEMY--PVPPRPETQ-------GLTETYVGNWLAK--H-G-SREKLIIASKVS--GPSRN--ND---KGI-RPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAV------------SLLDTLDALAEYQRAGKIRYIGVSNETA-FGVMRY---LHLADK------HDLPRIVTIQNP--YSLLNRS--FEV-------------G-LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGA-RNTLFSRFT----------RYS----G---------------E---QTQKAVAAYVD---IARRHGL---D---------------PAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLH-LELSED-------------------
17 PsiBlast_PDB 70.4225% -75 - C4 -2R9R KCAB2_RAT A:[6-300] --RNLG-KSGLRVSCLGLGTW--V---TFG-------GQITDEMAEH--LMTLAYDNGINLFDTAEVY--A-------A-------GKAEVVLGNIIKK--KGW-RRSSLVITTKIFWGGKAET--ER---GL------S--RKHIIEGLKASLERLQLEYVDVVFAN------------RPDPNT-----------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY----------------------SVARQ--FNLIPPI--CEQAEYHMFQREKVEVQ-LPELFHKIGVGAMTWSPLACG------------------IVSGKYDSG-IP-----PYS----RASLKGYQWLKDKILSE---EGRRQQAKLKE---LQAIAERLGCT---------------LPQLAIAWCLRNEGVSSVLLGASNAEQLMENI------------------------------
19 PsiBlast_PDB 69.9825% -77 - C4 -4JTA KCAB2_RAT A:[6-300] --RNLG-KSGLRVSCLGLGTW--V---TFG-------GQITDEMAEH--LMTLAYDNGINLFDTAEVY--A-------A-------GKAEVVLGNIIKK--KGW-RRSSLVITTKIFWGGKAET--ER---GL------S--RKHIIEGLKASLERLQLEYVDVVFAN------------RPDPNT-----------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY----------------------SVARQ--FNLIPPI--CEQAEYHMFQREKVEVQ-LPELFHKIGVGAMTWSPLACG------------------IVSGKYDSG-IP-----PYS----RASLKGYQWLKDKILSE---EGRRQQAKLKE---LQAIAERLGCT---------------LPQLAIAWCLRNEGVSSVLLGASNAEQLMENI------------------------------
13 PsiBlast_PDB 69.9427% -91 - C4 -4AST - GPR_ECOLI A:[20-313] -------KSGLRLPALSLG-L--WH--NFGHV-----NAL--ESQRA--ILRKAFDLGITHFDLANNYGPP-------P-------GSAEENFGRLLREDFA-A-YRDELIISTKA---GYDMW--P----GPY-GSGGS--RKYLLASLDQSLKRMGLEYVDIFYSH------------RVDENT-----------------PMEETASALAHAVQSGKALYVGISSYSP-ERTQKMVELL----R------E--WKIPLLIHQPSYNLLNRWVDKS--------------G-LLDTLQNNGVGCIAFTPLAQGLLT-------------------------------------------------------------------------ANL-------NSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQ-----------------------------
4 PsiBlast_PDB 69.7824% -89 - C4 -1PYF IOLS_BACSU A:[8-291] -------KSDLQVFPIGLG-T--N---AVGGHNLYPNLNE--ETGKE--LVREAIRNGVTMLDTAYIY--G-------I-------GRSEELIGEVLRE--F-N--REDVVIATKA---AHR----KQ---GNDFVFDNS--PDFLKKSVDESLKRLNTDYIDLFYIH------------FPDEHT-----------------PKDEAVNALNEMKKAGKIRSIGVSNFSL-EQLKEA---N----K------D--GLVDVLQGE--YNLLNRE--AEK-------------T-FFPYTKEHNISFIPYFPLVSGLLA---------GKY-TE--DTTFPEG-DLRNEQEHFK----G---------------E---RFKENIRKVNK---LAPIAEKHNVD---------------IPHIVLAWYLARPEIDILIPGAKRADQLIDNIK-----------------------------
11 PsiBlast_PDB 69.6127% -90 - C4 -4AUB GPR_ECOLI A:[40-333] -------KSGLRLPALSLG-L--WH--NFGHV-----NAL--ESQRA--ILRKAFDLGITHFDLANNYGPP-------P-------GSAEENFGRLLREDFA-A-YRDELIISTKA---GYDMW--P----GPY-GSGGS--RKYLLASLDQSLKRMGLEYVDIFYSH------------RVDENT-----------------PMEETASALAHAVQSGKALYVGISSYSP-ERTQKMVELL----R------E--WKIPLLIHQPSYNLLNRWVDKS--------------G-LLDTLQNNGVGCIAFTPLAQGLLT---------GK--------------------------------------------------------LTE---ANL-------NSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQ-----------------------------
15 PsiBlast_PDB 69.4726% -77 - C4 -1ZSX KCAB2_HUMAN A:[27-321] --RNLG-KSGLRVSCLGLGTW--V---TFG-------GQITDEMAEQ--LMTLAYDNGINLFDTAEVY--A-------A-------GKAEVVLGNIIKK--KGW-RRSSLVITTKIFWGGKAET--ER---GL------S--RKHIIEGLKASLERLQLEYVDVVFAN------------RPDPNT-----------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY----------------------SVARQ--FNLTPPI--CEQAEYHMFQREKVEVQ-LPELFHKIGVGAMTWSPLACG------------------IVSGKYDSG-IP-----PYS----RASLKGYQWLKDKILSE---EGRRQQAKLKE---LQAIAERLGCT---------------LPQLAIAWCLRNEGVSSVLLGASNADQLMENI------------------------------
10 PsiBlast_PDB 69.2526% -76 - C4 -3EB4 KCAB2_RAT A:[6-300] --RNLG-KSGLRVSCLGLGTW--V---TFG-------GQITDEMAEH--LMTLAYDNGINLFDTAEVY--A-------A-------GKAEVVLGNIIKK--KGW-RRSSLVITTKIFWGGKAET--ER---GL------S--RKHIIEGLKASLERLQLEYVDVVFAN------------RPDPNT-----------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY----------------------SVARQ--FNLIPPR--CEQAEYHMFQREKVEVQ-LPELFHKIGVGAMTWSPLACG------------------IVSGKYDSG-IP-----PYS----RASLKGYQWLKDKILSE---EGRRQQAKLKE---LQAIAERLGCT---------------LPQLAIAWCLRNEGVSSVLLGASNAEQLMENI------------------------------
5 PsiBlast_PDB 69.1824% -86 - C4 -1PZ0 IOLS_BACSU A:[8-291] -------KSDLQVFPIGLG-T--N---AVGGHNLYPNLNE--ETGKE--LVREAIRNGVTMLDTAYIY--G-------I-------GRSEELIGEVLRE--F-N--REDVVIATKA---AHR----KQ---GNDFVFDNS--PDFLKKSVDESLKRLNTDYIDLFYIH------------FPDEHT-----------------PKDEAVNALNEMKKAGKIRSIGVSNFSL-EQLKEA---N----K------D--GLVDVLQGE--YNLLNRE--AEK-------------T-FFPYTKEHNISFIPYFPLVSGLLA---------GKY-TE--DTTFPEG-DLRNEQEHFK----G---------------E---RFKENIRKVNK---LAPIAEKHNVD---------------IPHIVLAWYLARPEIDILIPGAKRADQLIDNIK-----------------------------
20 PsiBlast_PDB 68.6725% -75 - C4 -4JTC KCAB2_RAT A:[6-300] --RNLG-KSGLRVSCLGLGTW--V---TFG-------GQITDEMAEH--LMTLAYDNGINLFDTAEVY--A-------A-------GKAEVVLGNIIKK--KGW-RRSSLVITTKIFWGGKAET--ER---GL------S--RKHIIEGLKASLERLQLEYVDVVFAN------------RPDPNT-----------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY----------------------SVARQ--FNLIPPI--CEQAEYHMFQREKVEVQ-LPELFHKIGVGAMTWSPLACG------------------IVSGKYDSG-IP-----PYS----RASLKGYQWLKDKILSE---EGRRQQAKLKE---LQAIAERLGCT---------------LPQLAIAWCLRNEGVSSVLLGASNAEQLMENI------------------------------
16 PsiBlast_PDB 68.1025% -75 - C4 -2A79 KCAB2_RAT A:[6-300] --RNLG-KSGLRVSCLGLGTW--V---TFG-------GQITDEMAEH--LMTLAYDNGINLFDTAEVY--A-------A-------GKAEVVLGNIIKK--KGW-RRSSLVITTKIFWGGKAET--ER---GL------S--RKHIIEGLKASLERLQLEYVDVVFAN------------RPDPNT-----------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY----------------------SVARQ--FNLIPPI--CEQAEYHMFQREKVEVQ-LPELFHKIGVGAMTWSPLACG------------------IVSGKYDSG-IP-----PYS----RASLKGYQWLKDKILSE---EGRRQQAKLKE---LQAIAERLGCT---------------LPQLAIAWCLRNEGVSSVLLGASNAEQLMENI------------------------------
18 PsiBlast_PDB 68.0225% -78 - C4 -3LNM KCAB2_RAT A:[6-300] --RNLG-KSGLRVSCLGLGTW--V---TFG-------GQITDEMAEH--LMTLAYDNGINLFDTAEVY--A-------A-------GKAEVVLGNIIKK--KGW-RRSSLVITTKIFWGGKAET--ER---GL------S--RKHIIEGLKASLERLQLEYVDVVFAN------------RPDPNT-----------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAY----------------------SVARQ--FNLIPPI--CEQAEYHMFQREKVEVQ-LPELFHKIGVGAMTWSPLACG------------------IVSGKYDSG-IP-----PYS----RASLKGYQWLKDKILSE---EGRRQQAKLKE---LQAIAERLGCT---------------LPQLAIAWCLRNEGVSSVLLGASNAEQLMENI------------------------------
12 PsiBlast_PDB 67.5527% -88 - C4 -3N6Q GPR_ECOLI A:[20-313] -------KSGLRLPALSLG-L--WH--NFGHV-----NAL--ESQRA--ILRKAFDLGITHFDLANNYGPP-------P-------GSAEENFGRLLREDFA-A-YRDELIISTKA---GYDMW--P----GPY-GSGGS--RKYLLASLDQSLKRMGLEYVDIFYSH------------RVDENT-----------------PMEETASALAHAVQSGKALYVGISSYSP-ERTQKMVELL----R------E--WKIPLLIHQPSYNLLNRWVDKS--------------G-LLDTLQNNGVGCIAFTPLAQGLLT---------GKY-L-----------------------------------------------------LTE---ANL-------NSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQ-----------------------------
31 HHSearch 67.0027% -79 - C4 -1LQA TAS_ECOLI A:[1-344] MQYHRIPHSSLEVSTLGLG-TMTF---GEQ-------NSE--ADAHA--QLDYAVAQGINLIDVAEMY--P-------VPPRPETQGLTETYVGNWLAK--H-G-SREKLIIASKV---SGPSR--NNDKGIRP-DQALD--RKNIREALHDSLKRLQTDYLDLYQVH------------WPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETA-FGVMRY---L----HLADKHDL--PRIVTIQNP--YSLLNRS--FE--------------VGLAEVSQYEGVELLAYSCLGFGTLTG--------KYLNGAKPAG-ARNTLFS-----RFTRYSGE---------------QTQ-KAVAAYVDIARR--HGL-------D---------------PAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLH-LELSEDVLAEIEAVHQVYTYP----
36 HHSearch 64.9927% -80 - C4 -3N6Q GPR_ECOLI A:[13-338] MQYRYCGKSGLRLPALSLG-L--WHNFGHV-------NAL--ESQRA--ILRKAFDLGITHFDLANNY--G-------PPP-----GSAEENFGRLLRE--DFAAYRDELIISTKA---GYDMW--P----GPY-GSGGS--RKYLLASLDQSLKRMGLEYVDIFYSH------------RVDENT-----------------PMEETASALAHAVQSGKALYVGISSYSP-ERTQKM---V----ELLREW-K--IPLLIHQPS--YNLLNRW--VDKS------------G-LLDTLQNNGVGCIAFTPLAQGLLTG--------KYL----------------------L----T---------------EANLNSLRLLNEMAQQ--RGQ-------S---------------MAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNLTFSTKELAQIDQHIADGELN----