@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA1813: (2016-03-29 )
MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKITKRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKEEKNSNWLKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKFDSTKGIGRTSSNSYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDLKYGGEVKNRNDELLFYRNTRIATVENPELSFASKYRYPALVRSGFNPEFLTYLSNEKSNEKTQFEVTYTRNQDILKNRPGIHYAPPILEKNKDGQRLIVTYEVDWKNKTVKVVDKYSDDNKPYKEG

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70...--.....80........90........100.......110.......120...--....130----........140.......150.......160.......170......---.--180..--.--....190........200.......210.......220...---.------...230..---.---....-------.240.........250.....----..260.----......270.......280--.-.-.....290......-----.----300....-....310........---320.-----..--....330.......-340.......350
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKNKKRVLIASSLSCAILLLSAATTQANSAHKDSQDQNKKEHVDKSQQKDKRNVTNKDKNSTVPDDIGKNGKIT--KRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKE--EKNSNW-----LKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGKF---D--STKGI--G--RTSSN-SYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDL---K------YGGE-VKN---R---NDEL-------LF--YRNTRIATVENPELSFA----SKYRYP----ALVRSGFNPEFLTYLSNEK--S-N-EKTQFEVTYTRNQD-----I----L-KNRPG-IHYAPP-ILEKNKDG---QRLI-----VT--YEVDWKNKTVKVVD-KYSDDNKPYKEG
1 PsiBlast_PDB 87.0999% -21 - C3 -4TW1 - ? B:[35-323] -------------------------------------------------------------TAPDDIGKNGKIT--KRTETVYDEKTNILQNLQFDFIDDPTYDKNVLLVKKQGSIHSNLKFESHKE--EKNSNW-----LKYPSEYHVDFQVKRNRKTEILDQLPKNKISTAKVDSTFSYSSGGK--------------G--RTSSN-SYSKTISYNQQNYDTIASGKNNNWHVHWSVIANDL---K------YGGE-VKN---R---NDEL-------LF--YRNTRIATVENPELSFA----SKYRYP----ALVRSGFNPEFLTYLSNEK--S-N-EKTQFEVTYTRNQD-----I----L-KNRPG-IHYAPP-ILEKNKDG---QRLI-----VT--YEVDWKNKTVKVVD-KYSDDNKPYKE-
2 PsiBlast_PDB 75.1037% -37 - C3 -3ROH ? A:[51-325] ----------------------------------------------------------------ENIGDGAEVI--KRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFS---D--VKGSGYELTKRMIWPFQYNIGLTTK-DPNVSLINYLPKNKIETTDVGQTLGYNIGGNF---Q--SAPSI--G--GNGSF-NYSKTISYTQKSYVSEVD-KQNSKSVKWGVKANEF---V------TPDG-KKS---A---HDRY-------LF--VQSPNGPTGSAREY-FA----PDNQLP----PLVQSGFNPSFITTLSHEKG-S-S-DTSEFEISYGRNLD-----ITYATL-FPRTG-IY------AERKHNAFVNRNFV-----VR--YEVNWKTHEIKV---------------
23 HHSearch 70.6234% -21 - C3 -3ROH ? A:[48-329] -------------------------------------------------------------TNIENIGDGAEVI--KRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKR-----MIWPFQYNIGLTTKD-PNVSLINYLPKNKIETTDVGQTLGYNIGGNF---Q--SAPSI--G--GNGSF-NYSKTISYTQKSYVSEVDKQ-NSKSVKWGVKANEF---V------TPDG-KKS---A---HDRY-------LF--VQSPNGP-TGSAREYFA----PDNQLP----PLVQSGFNPSFITTLSHEK--G-SSDTSEFEISYGRNLD-----I----T-YATLFPRTGIYAERKHNAFVN---RNFV-----VR--YEVNWKTHEIKVKG-HN----------
3 PsiBlast_PDB 69.4134% -22 - C3 -4IZL - ? A:[13-288] ----------------------------------------------------------------ENIGDGAEVV--KRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKN--TDHIKA-----MRWPFQYNIGLKT-NDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNF---N--SGPS-------NGSF-NYSKTISYNQQNYISEVEHQNSK-SVQWGIKANSF---I------TSLG-KMS---G---HDPN-------LF--VGYKPYS--QNPRDYFV----PDNELP----PLVHSGFNPSFIATVSHEKG-S-G-DTSEFEITYGRNMD-----V----THATRRT-THYGAS-YLEGSRIH---NAFVNRNYTVK--YEVNWKTHEIKV---------------
22 HHSearch 68.8935% -27 - C3 -2QK7 - HLGA_STAAU A:[11-278] ----------------------------------------------------------------------AEII--KRTQDITSKRLAICQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDL-------IKR-----MIWPFQYNISLKTKD-SNVDLINYLPKNKIDSADVSQKLGYNIGGNF---Q--SAPSI--G--GSGSF-NYSKTISYNQKNYVTEVESQ-NSKGVKWGVKANSF---V------TP---QVS---A---YDQY-------LF--AQDPTG---PAARDYFV----PDNQLP----PLIQSGFNPSFITTLSHEK--G-KGDKSEFEITYGRNMD-----A----T-YAYVT---RLAVDRKHDAFKN---RNVT-----VK--YEVNWKTHEVKIKS-IT----------
4 PsiBlast_PDB 68.6134% -32 - C3 -2QK7 - HLGA_STAAU A:[11-274] ----------------------------------------------------------------------AEII--KRTQDITSKRLAICQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDL-------IKR-----MIWPFQYNISLKTK-DSNVDLINYLPKNKIDSADVSQKLGYNIGGNF---Q--SAPSI--G--GSGSF-NYSKTISYNQKNYVTEVESQNSK-GVKWGVKANSF---V------TP---QVS---A---YDQY-------LF--AQDPTGPAARD---YFV----PDNQLP----PLIQSGFNPSFITTLSHEK--GKG-DKSEFEITYGRNMDATYAYV----T---RLA-V--------DRKHDAFKNRNVT-----VK--YEVNWKTHEVKI---------------
11 PsiBlast_PDB 67.6531% -15 - C3 -4Q7G ? A:[38-322] -----------------------------------------------------------------------KITLYKTTATSDNDKLNISQILTFNFIKDKSYDKDTLVLKAAGNINSGYK-KPNPK--DYNYSQ-----FYWGGKYNVSVSSESNDAVNVVDYAPKNQNEEFQVQQTLGYSYGGDI---N--ISNGLSGG--LNGSK-SFSETINYKQESYRTTIDRKTNHKSIGWGVEAHKI---M------NNGW-GPY---G---RDSYDPTYGNELF--LGGRQSSS--NAGQNFL----PTHQMP----LLARGNFNPEFISVLSHKQ--N-DTKKSKIKVTYQREMD-----R----Y-TNQWNRLHWVGN-NY-KNQNT---VTFT-----ST--YEVDWQNHTVKLIG-TDSKETNP----
9 PsiBlast_PDB 67.1434% -33 - C3 -3B07 - HLGA_STAAM B:[21-284] ----------------------------------------------------------------------AEII--KRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKK--YPYIKR-----MIWPFQYNISLKTK-DSNVDLINYLPKNKIDSADVSQKLGYNIGGNF---Q--SAPSI--G--GSGSF-NYSKTISYNQKNYVTEVESQNSK-GVKWGVKANSF---V------TPNG-QVS---A---YDQY-------LF--AQDPTGPAARD---YFV----PDNQLP----PLIQSGFNPSFITTLSHER--GKG-DKSEFEITYGRNMDATYAYV----T-RHRLA-VDRKHD-AF-KNRN------VT-----VK--YEVNWKTHEVKI---------------
5 PsiBlast_PDB 66.5934% -22 - C3 -4IYT ? A:[13-288] ----------------------------------------------------------------ENIGDGAEVV--KRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKN--TDHIKA-----MRWPFQYNIGLKT-NDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNF---N--SGP--------NGSF-NYSKTISYNQQNYISEVEHQNSK-SVQWGIKANSF---I------TSLG-KMS---G---HDPN-------LFVGYK----PASQNPRDYFV----PDNELP----PLVHSGFNPSFIATVSHEKG-S-G-DTSEFEITYGRNMD-----V----THATRRT-T---NS-YLEGSRIH---NAFVNRNYTVK--YEVNWKTHEIKV---------------
8 PsiBlast_PDB 66.5634% -22 - C3 -4IYC - ? A:[13-288] ----------------------------------------------------------------ENIGDGAEVV--KRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKN--TDHIKA-----MRWPFQYNIGLKT-NDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNF---N--SGP-------GNGSF-NYSKTISYNQQNYISEVEHQNSK-SVQWGIKANSF---I------TSLG-KMS---G---HDPN-------LF--VGYKPYS--QNPRDYFV----PDNELP----PLVHSGFNPSFIATVSHEKG-S-G-DTSEFEITYGRNMD-----V----THATRRT----GNS-YLEGSRIH---NAFVNRNYTVK--YEVNWKTHEIKV---------------
10 PsiBlast_PDB 66.5433% -22 - C3 -4J0O - ? A:[12-287] ----------------------------------------------------------------ENIGDGAEVV--KRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKN--TDHIKA-----MRWPFQYNIGLKT-NDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNF---N--S---------GNGSF-NYSKTISYNQQNYISEVEHQNSK-SVQWGIKANSF---I------TSLG-KMS---G---HDPN-------LF--VGYKPYS--QNPRDYFV----PDNELP----PLVHSGFNPSFIATVSHEKG-S-G-DTSEFEITYGRNMD-----V----THATRRT---AGNS-YLEGSRIH---NAFVNRNYTVK--YEVNWKTHEIKV---------------
7 PsiBlast_PDB 66.5034% -24 - C3 -1T5R - ? A:[5-280] ----------------------------------------------------------------ENIG--AEVV--KRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKN--TDHIKA-----MRWPFQYNIGLKT-NDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNF---N--S------------SF-NYSKTISYNQQNYISEVEHQNSK-SVQWGIKANSF---I------T----KMS---G---HDPN-------LF--VGYKPYS--QNPRDYFV----PDNELP----PLVHSGFNPSFIATVSHEKG-S-G-DTSEFEITYGRNMD-----V----THATRRT-----NS-YLEGSRIH---NAFVNRNYTVK--YEVNWKTHEIKV---------------
6 PsiBlast_PDB 66.4734% -13 - C3 -4IYA ? A:[13-288] ----------------------------------------------------------------ENIGDGAEVV--KRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKN--TDHIKA-----MRWPFQYNIGLKT-NDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNF---N--SGPST--G--GNGSF-NYSKTISYNQQNYISEVEHQNSK-SVQWGIKANSF---I------TSLG-KMS---G---HDPN-------LF--VGYKPYS--QNPRDYFV----PDNELP----PLVHSGFNPSFIATVSHEKG-S-G-DTSEFEITYGRNMD-----V----THATRRT-THYGNS-ALEGSRIH---NAFVNRNYTVK--YEVNWKTHEIKV---------------
16 PsiBlast_PDB 63.0727% -24 - C3 -3M4E HLA_STAAU A:[13-254] -----------------------------------------------------------------DIGSNTTVK--TGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYS-EE--GANKSG-----LAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYNSTLTYGFNGNVTGDD--TGKIG--G--LIGANVSIGHTLKYVQPDFKTILESPTDK-KVGWKVIFNNMVNQN------WG---PYD---R---DSWN-------PV--YGNQLFMKTRNGSMKAA----DNFLDPNKASSLLSSGFSPDFATVITMDRKAS-K-QQTNIDVIYERVRD----------------------------------------------------------------------------
18 PsiBlast_PDB 62.9727% -23 - C3 -7AHL - HLA_STAAU A:[13-254] -----------------------------------------------------------------DIGSNTTVK--TGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYS-EE--GANKSG-----LAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDD--TGKIG--G--LIGANVSIGHTLKYVQPDFKTILESPTDK-KVGWKVIFNNMVNQN------WG---PYD---R---DSWN-------PV--YGNQLFMKTRNGSMKAA----DNFLDPNKASSLLSSGFSPDFATVITMDRKAS-K-QQTNIDVIYERVRD----------------------------------------------------------------------------
12 PsiBlast_PDB 62.4730% -12 - C3 -2LKF - HLGB_STAAU A:[18-299] ------------------------------------------------------------------------LY--KTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGF-VKPNPN--DYDFSK-----LYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDI---S--ISNGL-----LNGNT-AFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKI---MNNGWGPYGRD-SFHPTYG---NELF-------LA--GRQSSAYAGQN----FI----AQHQMP----LLSRSNFNPEFLSVLSHRQ--D-GAKKSKITVTYQREMD-----L----Y-QIRWN-GFYWAG-ANYKNFKT---RTFK-----ST--YEIDWENHKVKLLDTKETENNK-----
14 PsiBlast_PDB 62.4128% -28 - C3 -4IDJ HLA_STAAU A:[15-256] -----------------------------------------------------------------DIGSNTTVK--TGDLVTYDKENGMLKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYS-EE--GANKSG-----LAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDD--T---------------SIGHTLKYVQPDFKTILESPTDK-KVGWKVIFNNMVNQN------WG---PYD---R---DSWN-------PV--YGNQLFMKTRNGSMKAA----DNFLDPNKASSLLSSGFSPDFATVITMDRKAS-K-QQTNIDVIYERVRD----------------------------------------------------------------------------
13 PsiBlast_PDB 62.4131% -18 - C3 -1PVL ? A:[15-299] -----------------------------------------------------------------------KITLYKTTATSDSDKLKISQILTFNFIKDKSYDKDTLILKAAGNIYSGYTKPNPKD--TISSQF-----Y-WGSKYNISINSDSNDSVNVVDYAPKNQNEEFQVQQTVGYSYGGDI---NISNGLSG--G--G---K-SFSETINYKQESYRTSLDKRTNFKKIGWDVEAHKI---MNNGWGPYGRD-SYH---STYGNEMF-------LG--SRQSNLNAGQN----FL----EYHKMP----VLSRGNFNPEFIGVLSRKQN-A-A-KKSKITVTYQREMD-----R----Y-TNFWNQLHW----IGNNYKDE---NRAT-----HTSIYEVDWENHTVKLID-TQSKEKNP----
15 PsiBlast_PDB 62.0627% -22 - C3 -3M4D - HLA_STAAU A:[13-254] -----------------------------------------------------------------DIGSNTTVK--TGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYS-EE--GANKSG-----LAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYNSTLTYGFNGNVTGDD--TGKIG--G--LIGANVSIGHTLKYVQPDFKTILESPTDK-KVGWKVIFNNMVNQN------WG---PYD---R---DSWN-------PV--YGNQLFMKTRNGSMKAA----DNFLDPNKASSLLSSGFSPDFATVITMDRKAS-K-QQTNIDVIYERVRD----------------------------------------------------------------------------
29 Fugue 61.9228% 4 * C3 *3LKF HLGB_STAAU A:[1-299] ---------------------------------------------EGKITPVSVKK----------VDDKVTLY--KTTATADSDKFKISQILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPND---YDFSK-----LYWGAKYNVSISSQSNDSVNVVDYAPKNQNEEFQVQNTLGYTFGGDI---S--ISN-----GL----T-AFSETINYKQESYRTTLSRNTNYKNVGWGVEAHKI---M------NNGWGPYG---R---DSFH-------PT--YGNELFLAGRQSSAYAGQNFIAQHQMP----LLSRSNFNPEFLSVLSHRQDG--A-KKSKITVTYQREMD-----L----Y-QIRWN-GFYWAG-ANYKNFKT---RTFK-----ST--YEIDWENHKVKLLD-TKETENNK----