@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : SA2167: (2016-04-01 )
MNYKQSAEDILNAIGGEENLDAMAHCATRLRLVLNDESLVNEEALNNMDVVKGTFSTGGQYQIIIGSGTVNKVFSELEKLTGKEASTTSEVKAQSAKNMNPLQRFVKMLSDIFVPIIPAIVAGGLLMGLNNILTAKDLFFSGKSLIDVYSQFAGLAEMINVFANAPFTLLPILIGFSAAKRFGGNPFLGAVLGMILVHPSLMSAYDFPKAVEAGKAIPYWDVFGLHINQVGYQGQVLPMLVAAYILASIEKGLRKVIPTVLDNLLTPLLSIFITAFLTFSFVGPITRQLGYWLSDGLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNVAQGGAAIAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAIVGSGIGSAYIAFFKVKAIALGTAGLPGFISINPVHAGWLHYFVGMTISFIIAITVTLILSKRKANKEVVE
Atome Classification :
(20 SA)
---------------------------------------------------------------------------.........------10........--20-.........30.....--...40........50........60.......--..70........80........90..-------......100.......110...------------....120.....----..130.....--.----.140....-----...150..--..--....160.......170..----.....180.......190-....---....-200....-...210.......220.......230.....--..240.......250....-----....260.--------......270-...--.--..---.280....-.------..290..-.-..---------..300-.-..--------------------.....310------.....-------------....320.------.------.-----....--330.----..-----------.....340-.-.-...--------...-.350....-.-..---------360.......370-.....-------------....380...-------------------------....390--...----.....400----.--...-------...410..---.....420..-------.....430-----.........440......----...450.--------......460-.....-.---.470.......480---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------MNY
K
Q
S
A
E
D
------
I
L
N
AIGGE
E
N
--
L
--
D
A
M
A
H
C
A
T
R
L
R
L
V
LND--ESLV
N
E
E
ALNNM
D
V
V
K
G
TFSTGG
Q
-
Y
Q
I
I
IGS--
G
T
V
N
K
V
F
S
E
L
E
K
L
TGKEAST
T
S
E
V
K
A
-------
Q
SAKN
M
N
P
L
Q
R
F
V
K
M
L
S
D
I
F
V
P
------------
I
I
P
A
I
V
A
G
G
L
L
M
----
G
L
N
N
I
L
T
A
K
D
--
L
----FFS
G
K
S
L
I
-----
D
V
Y
S
-
Q
F
A
--
G
L
--
A
E
M
I
N
V
FANA
P
F
T
L
L
P
I
L
I
----
G
F
S
A
A
K
RFGGN
P
F
L
G
A
V
--
L
G
M
I
---
L
V
H
P
-
S
L
M
S
A
YD-F
P
K
A
VEAGKAIPYW
D
V
F
G
L
H
I
NQVGYQG
Q
V
L
--
P
M
L
V
A
A
Y
I
L
A
S
I
E
K
-
G
L
R
K
-----
V
I
P
T
V
L
D
N
--------
L
L
T
P
L
L
S
I
F
-
I
T
A
--
F
--
L
T
---
F
S
F
V
G
P
I
T
-
R
------
Q
L
G
Y
W
L
S
-
D
-
G
L
---------
T
W
L
Y
--
E
-
F
G--------------------G
A
I
G
G
L
--------
I
F
G
L
L
-------------
Y
A
P
I
V
I
TG------M------H-----H
S
F
I
--
A
-
V
E
----
T
T
-----------
L
I
A
DAT---K-T-GG
S
--------
F
I
F
-
P
I
A
T
M
S
N
V
-A-QG---------
G
A
A
I
A
A
F
F
I
I
K---QNKKL-------------KG
V
A
S
A
A
G
I
S
-------------------------
A
L
L
GIT---EP
A
----
M
F
G
V
N
L
K
L
----R--Y
P
F
-------
I
G
A
I
V
GSG---I
G
S
A
Y
I
A
F
F
K
-------
V
K
A
I
A
L-------GTAGL
P
G
F
I
S
--INPV
H
A
----
G
W
L
H
Y
F
V
--------
G
M
T
I
S
F
I
I
A
-
I
T
V
T
L
-
I
---
L
SKRKANKEVVE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
79.19
19%
-112
- C1 -
4R4X
2
?
A:
[1-546]
----------------------------------------------------------------------A
Q
T
Y
E
I
T
Y
Q
N
S
F
E
-------------
G
K
I
N
--
Q
--
N
H
I
I
S
I
T
N
S
D
K
T
L
L
F
N
--
E
K
I
K
N
K
K
A
D
F
P
F
E
V
N
E
I
N
R
K
N
N
E
V
-
S
Q
F
A
F
L
N
--
N
N
E
I
V
K
T
S
D
N
T
I
L
A
K
Q
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F
K
P
T
S
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T
G
K
I
LG
Y
N
V
K
K
A
V
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S
V
N
S
N
T
I
E
V
W
Y
T
N
D
L
K
V
K
GGPSILGQDLGL
V
L
K
T
V
R
N
G
S
S
V
V
----
E
A
T
S
V
K
K
I
K
A
--
L
DDQS
L
F
N
G
K
N
I
T
E
K
D
A
L
T
Y
K
D
M
I
W
K
--
S
R
--
F
I
T
I
P
V
F
E
N
E
T
I
N
F
S
D
A
S
K
----
S
D
Q
V
I
Q
R
F
G
N
----------
G
T
I
---
I
L
K
K
-
V
K
I
P
E
-------
I
K
Q
G
N
T
I
F
V
E
L
K
Q
K
S
N
G
D
A
Y
D
R
T
G
D
V
F
I
I
P
Q
E
R
A
I
S
Y
Y
T
G
L
T
Q
-
G
V
K
S
------
L
P
V
Y
Q
N
G
NG
K
S
Y
Q
GV
A
L
T
P
D
Y
L
P
F
-
I
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L
M
R
F
--
F
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---
P
F
G
I
G
H
F
N
-
E
------
K
I
Q
L
----
K
-
G
K
---------
N
W
H
N
N
T
P
-
Y
R
--------------------
Q
D
I
T
E
L
--------
R
P
Q
L
S
-------------
G
K
E
I
L
I
G
A
------
F
I
G
N
YDK
G
-----
G
H
Q
I
--
S
-
L
E
----
L
S
-----------
I
H
P
D
Q
Q
---
K
I
V
-
N
N
N
--------
F
V
L
-
P
V
F
N
T
T
N
V
M
E
M
A
G
Q
D
Y
PTMFNS
D
K
G
V
E
V
D
F
I
L
T
K
D
L
K
N
A
Q
L
-------------
R
Y
I
T
T
G
H
G
G
W
-------------------------
G
A
G
D
E
F
---
V
P
K
----
E
N
S
I
Y
L
D
G
----
K
--
L
A
H
-------
A
F
T
P
W
R
T
D
---
C
G
S
Y
R
L
F
N
P
A
SGNFEDG
L
S
S
S
D
L
SRSNWCP
G
T
I
T
N
P
V
Y
I
N
--
L
G
N
L
N
A
----
G
K
H
T
I
Q
V
K
I
P
Q
G
A
P
E
G
S
S
Q
S
F
W
N
V
-
S
G
V
L
L
-
G
---
Q
E
H
H
H
H
H
H
H
H
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
Fugue
76.22
17%
-102
- C3 -
4UT1
20
?
A:
[79-633]
-------------------------------------------------------------S
N
Q
L
N
A
A
Q
T
Q
G
S
S
L
S
T
Y
Y
T
L
V
A
Q
------
L
N
N
Y
V
G
S
P
T
A
G
I
A
--
T
A
I
T
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Y
F
T
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L
Q
T
V
A
N
N
A
A
D
P
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Q
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M
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A
Q
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L
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A
A
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Q
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R
Q
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N
S
Q
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T
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T
V
T
Q
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S
Y
T
S
Q
I
A
Q
L
N
E
Q
I
A
S
-------
A
S
S
P
N
Q
L
L
D
Q
R
D
L
A
V
S
K
L
S
Q
L
A
------------
G
V
Q
V
V
Q
S
N
G
-------
N
Y
S
V
F
L
S
G
G
Q
--
P
----
L
V
V
G
N
A
S
Y
-----
Q
L
A
T
-
V
A
S
PS
D
P
--
S
E
L
T
I
V
S
K
G
V
A
G
S
A
Q
P
G
P
T
----
Q
Y
L
P
D
V
S
L
T
G
----
G
A
L
--
G
G
L
L
---
A
F
R
S
Q
T
L
D
P
A
Q
A
-
Q
L
G
A
L
A
V
S
F
A
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Q
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N
A
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A
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G
V
D
M
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G
N
P
G
G
S
L
--
F
A
V
G
A
P
A
V
Y
A
N
Q
N
N
-
T
G
S
A
-----
T
L
S
V
S
F
V
D
--------
G
T
Q
P
T
T
S
D
Y
-
A
L
S
--
Y
DG
A
K
---
Y
T
L
T
D
R
A
T
G
S
------
V
V
G
T
A
T
P
-
S
-
S
T
---------
P
P
T
M
--
T
-
I
G
--------------------
G
L
K
L
S
L
SSTPNAG
D
S
F
T
V
L
-------------
P
T
R
G
A
L
D
G
------
F
------
S
LATAN
G
S
A
I
--
A
-
A
A
----
S
P
-----------
V
L
A
A
G
V
---
A
-
T
N
S
G
T
--------
G
V
I
-
S
Q
G
S
V
S
A
G
-
Y
-
Q
L
---------
P
S
G
T
T
T
L
A
Y
N
A
---
A
S
K
T
L
-------------
S
G
F
P
V
G
T
T
V
T
I
A
G
TP
P
T
S
I
N
I
TSATT
P
V
P
Y
D
PS
K
G
A
S
M
T
I
S
STT
Q
P
A
PSGV
M
N
G
V
S
V
S
L
----
S
--
G
T
P
ADG
D
Q
F
T
I
G
A
N
K
G
T
N
---
D
G
R
N
A
L
A
L
S
Q
-------
L
V
N
----------
S
K
T
M
N
N
G
T
T
T
--
L
T
G
A
Y
A
----
G
Y
V
N
A
I
G
--------
N
A
A
S
Q
L
K
A
S
S
A
A
Q
T
A
-
L
---
V
G
Q
I
T
Q
A
Q
Q
S
V
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
Fugue
68.37
14%
-89
* C4 *
1JV1
2
UAP1_HUMAN
A:
[1-501]
---------------------------------------------------------------------------
M
N
I
N
D
L
K
L
T
------
L
S
K
A
-----
G
--
Q
--
E
H
L
L
R
F
W
N
E
L
E
-
E
A
Q
Q
--
V
E
L
Y
A
E
L
Q
A
M
N
F
E
E
L
N
F
F
F
Q
K
A
I
E
-------
G
--
F
R
M
E
P
V
P
R
E
V
L
G
S
A
T
R
D
Q
D
Q
L
Q
A
W
E
S
-------
E
G
L
F
Q
I
S
Q
--------
N
K
V
A
V
L
------------
L
L
A
G
--
G
Q
G
T
R
L
----
G
V
A
Y
P
K
G
M
Y
D
--
V
G---
L
P
S
R
K
T
L
F
-----
Q
I
Q
A
-
E
R
I
--
L
K
--
L
Q
Q
V
A
E
K
Y
Y
G
N
K
C
I
I
P
W
Y
I
----
M
T
S
G
R
T
M
E
S
T
K
E
F
F
T
K
H
KY
F
G
L
K
---
K
E
N
V
-
I
F
F
Q
Q
G
M
-
L
P
A
M
S
F
D
G
K
-
I
I
L
E
E
K
N
K
V
S
M
A
P
D
G
-
N
G
G
L
Y
--
R
A
L
A
A
Q
N
I
V
E
D
M
E
Q
R
G
I
W
S
-----
I
H
V
Y
C
V
D
N
--------
I
L
V
K
V
A
D
P
R
-
F
I
G
--
F
--
C
I
Q
K
G
A
D
C
G
A
K
V
V
-
E
KTNPTE
P
V
G
V
V
C
R
V
D
-
G
V
---------
Y
Q
V
V
--
E
-
Y
S
EIS
L
A
T
A
Q
KRSSDGRLLFNA
G
N
I
A
N
H
--------
F
F
T
V
P
-------------
F
L
R
D
V
V
N
V
------
Y
------
E
-----
P
Q
L
Q
--
H
-
H
V
----
A
Q
K
K
I
P
Y
V
D
TQGQ
L
I
K
P
D
K
---
P
-
N
-
G
I
K
--------
M
E
K
-
F
V
F
D
I
F
Q
F
-
A
-
K
K
-------------
F
V
V
Y
E
V
L
---
R
E
D
E
F
-------------
S
P
L
K
N
A
D
S
Q
N
----------------------------
G
K
D
---
N
P
T
----
T
A
R
H
A
L
M
S
----
L
--
H
H
C
-------
W
V
L
N
A
G
G
H
---
F
I
D
E
N
G
S
R
L
P
-------
A
I
P
R
L
K
-------
D
A
N
D
V
P
I
Q
C
E
--
I
S
P
L
I
S
YAGE
G
L
E
S
Y
V
A
--------
D
K
E
F
H
-------
A
P
L
-
I
---
I
D
E
N
G
V
H
E
L
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_CBE
65.25
43%
-65
- C2 -
3IPJ
2
?
B:
[6-92]
-----------------------------------------------------------------------------
Y
N
K
I
A
N
E
------
L
I
K
I
I
G
-
E
D
N
--
I
--
I
S
I
T
H
C
A
T
R
L
R
V
M
V
K
D
--
R
E
I
I
N
D
K
K
V
E
K
V
D
E
V
K
G
V
F
F
T
S
G
Q
-
Y
Q
I
I
L
G
T
--
G
I
V
N
K
V
Y
A
E
V
E
K
M
G
L
K
T
L
S
K
K
E
Q
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
64.19
43%
-63
- C2 -
3IPJ
1
?
A:
[6-92]
-----------------------------------------------------------------------------
Y
N
K
I
A
N
E
------
L
I
K
I
I
G
-
E
D
N
--
I
--
I
S
I
T
H
C
A
T
R
L
R
V
M
V
K
D
--
R
E
I
I
N
D
K
K
V
E
K
V
D
E
V
K
G
V
F
F
T
S
G
Q
-
Y
Q
I
I
L
G
T
--
G
I
V
N
K
V
Y
A
E
V
E
K
M
G
L
K
T
L
S
K
K
E
Q
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
64.10
45%
-58
- C2 -
3IPJ
1
?
A:
[4-88]
---------------------------------------------------------------------------
N
K
Y
N
K
I
A
N
E
------
L
I
K
I
I
-
G
E
D
N
--
I
--
I
S
I
T
H
C
A
T
R
L
R
V
M
V
K
D
--
R
E
I
I
N
D
K
K
V
E
K
V
D
E
V
K
G
V
F
F
T
S
G
Q
-
Y
Q
I
I
L
G
T
--
G
I
V
N
K
V
Y
A
E
V
E
K
M
G
L
K
T
L
S
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
Fugue
63.87
41%
-57
- C2 -
3IPJ
1
?
A:
[1-95]
------------------------------------------------------------------------SNA
N
K
Y
N
K
I
A
N
E
------
L
I
K
I
I
G
-
E
D
N
--
I
--
I
S
I
T
H
C
A
T
R
L
R
V
M
V
K
D
--
R
E
I
I
N
D
K
K
V
E
K
V
D
E
V
K
G
V
F
F
T
S
G
Q
-
Y
Q
I
I
L
G
T
--
G
I
V
N
K
V
Y
A
E
V
E
K
M
G
L
K
T
L
S
K
K
E
Q
D
E
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38
Fugue
63.11
16%
-89
- C3 -
4CR2
-
RPN1_YEAST
Z:
[49-993]
LELL
V
E
R
L
K
E
DDS
S
L
Y
E
A
S
L
N
A
L
K
E
S
I
KNSTSSMTAVPK
P
L
K
F
L
RPT
Y
P
D
L
C
S
I
Y
D
KWTDPN
L
K
S
S
L
A
D
V
L
S
I
L
A
M
T
Y
S
E
N
G
K
H
D
S
L
R
Y
R
L
L
S
D
V
S
D
F
E
G
--
W
GH
E
Y
I
R
H
L
A
L
E
I
G
E
V
Y
N
D
--
Q
V
E
K
D
A
E
D
E
T
S
S
D
G
S
K
S
D
G
S
A
A
T
S
-
G
F
E
F
S
K
E
--
D
T
L
R
L
C
L
D
I
V
P
Y
F
L
K
H
N
G
E
E
D
A
V
D
L
L
-------
L
E
I
E
S
I
D
K
L
P
Q
F
V
D
--
E
N
T
F
Q
R
------------
V
C
Q
Y
M
V
A
C
V
P
L
L
PPPE
D
V
A
F
L
K
T
A
Y
S
--
I
----
Y
L
S
Q
N
E
L
T
-----
D
A
I
A
-
L
A
V
--
R
L
GE
E
D
M
I
R
S
V
F
D
A
T
---------------------
S
D
P
V
M
H
K
Q
--
L
A
Y
I
---
L
A
A
Q
-
K
T
S
F
E
Y
E
G
V
Q
D
I
I
G
N
G
K
L
S
E
H
F
L
Y
L
A
K
E
L
N
L
T
G
--------
P
K
V
P
E
D
I
Y
K
S
H
L
D
N
-
S
K
S
V
-----
F
S
S
A
G
L
D
S
--------
A
Q
Q
N
L
A
S
S
F
-
V
N
G
--
F
--
L
N
---
L
G
Y
C
N
-------------
D
K
L
I
V
-
D
-
N
D
---------
N
W
V
Y
--
K
-
T
K
--------------------
G
--
D
G
M
--------
T
S
A
V
A
-------------
S
I
G
S
I
Y
Q
W
------
N
------
L
-----
D
G
L
Q
--
Q
-
L
D
----
K
Y
-----------
L
Y
V
D
E
P
---
E
-
V
-
K
A
G
--------
A
L
L
-
G
I
G
I
S
A
S
G
-
V
-
H
D
---------
G
E
V
E
P
A
L
L
L
L
Q
---
D
Y
V
T
N
-------------
P
D
T
K
I
S
S
A
A
I
-------------------------
L
G
L
G
I
A
----------
F
A
G
S
K
N
D
E
----
V
--
L
G
L
-------
L
L
P
I
A
A
S
T
DLP
I
E
T
A
A
M
A
S
L
A
-------
L
A
H
V
F
V
-------
G
T
C
N
G
D
I
T
T
S
--
I
M
D
N
F
L
----
E
R
T
A
I
E
L
--------
K
T
D
W
V
R
F
L
A
-
L
A
L
G
I
-
L
Y
--
M
G
Q
G
E
Q
V
D
D
V
L
E
T
I
S
A
I
EH
P
M
T
S
A
I
E
V
L
V
G
S
C
A
Y
TGTGD
V
L
L
I
Q
D
L
L
H
R
L
TL
A
Y
A
V
L
G
I
A
L
I
A
L
GE
D
I
G
K
E
M
S
L
R
H
F
G
H
L
M
H
Y
GN
E
H
I
R
R
M
V
P
L
A
M
G
I
V
S
VSDPQ
M
K
V
F
D
T
L
T
R
F
S
H
DAD
L
E
V
S
M
N
S
I
F
A
M
G
L
C
G
AGTNNAR
L
A
Q
L
L
R
Q
L
A
S
Y
YSRE
Q
D
A
L
F
I
T
R
L
A
Q
G
L
L
H
LGKGTMTMDVFNDAHVLN
K
V
T
L
A
S
I
L
T
T
A
V
GLVSPSFMLKHHQLFYMLNAG
I
R
P
K
F
I
L
A
L
NDEG
E
P
I
K
V
N
V
R
V
G
QPVLLNHG
E
R
A
E
LETDEYISYTSHIEGV
V
I
L
K
K
NPDYREEE
41
Fugue
60.11
12%
-84
- C4 -
1JVG
2
UAP1_HUMAN
A:
[2-517]
-----------------------------------------------------------------------------
N
I
N
D
L
K
L
------
T
L
S
K
A
G
Q
E
H
L
--
L
--
R
F
W
N
E
L
E
E
A
Q
Q
V
E
L
Y
A
--
E
L
Q
A
M
N
F
E
E
L
N
F
F
F
Q
K
A
I
E
G
F
----------
D
--
A
R
M
E
P
V
P
R
E
V
L
G
S
A
T
R
D
Q
D
Q
L
Q
A
W
E
S
-------
E
G
L
F
Q
I
S
Q
--------
N
K
V
A
V
L
------------
L
L
A
G
--
G
Q
G
T
R
L
----
G
V
A
Y
P
K
G
M
Y
D
--
V
G---
L
P
S
R
K
T
L
F
-----
Q
I
Q
A
-
E
R
I
--
L
K
--
L
Q
Q
V
A
E
K
Y
Y
G
N
K
C
I
I
P
W
Y
I
----
M
T
S
G
R
T
M
E
S
T
K
E
F
F
T
K
H
KY
F
G
L
K
---
K
E
N
V
-
I
F
F
Q
Q
G
M
-
L
P
A
M
S
F
D
G
K
-
I
I
L
E
E
K
N
K
V
S
M
A
P
D
G
-
N
G
G
L
Y
--
R
A
L
A
A
Q
N
I
V
E
D
M
E
Q
R
G
I
W
S
-----
I
H
V
Y
C
V
D
N
--------
I
L
V
K
V
A
D
P
R
-
F
I
G
--
F
--
C
I
---
Q
K
G
A
D
C
G
A
-
K
------
V
V
E
K
T
N
P
-
T
E
P
V
---------
G
V
V
C
--
R
-
V
D
--------------------
G
V
Y
Q
V
V
--------
E
Y
S
E
I
-------------
S
L
A
T
A
Q
K
R
------
S
------
S
-----
D
G
R
L
--
L
-
F
N
----
A
G
-----------
N
I
------------
A
N
--------
H
F
F
-
T
V
P
F
L
R
D
V
-
V
-
N
V
---------
Y
E
P
Q
L
Q
H
H
V
A
Q
---
K
K
I
P
Y
V
D
TQG
Q
L
I
K
P
DKP
N
G
I
K
M
E
K
F
V
F
-------------------------
D
I
F
Q
F
A
---
K
K
F
----
V
V
Y
E
V
L
R
E
----
D
E
F
S
P
L
-------
K
N
A
D
S
Q
N
G
---
K
D
N
P
T
T
A
R
H
A
-------
L
M
S
L
H
H
-------
C
W
V
L
N
A
G
G
H
F
--
I
D
E
N
G
S
----
R
L
P
A
I
P
R
--------
S
V
P
I
Q
C
E
I
S
-
P
L
I
S
Y
-
A
GEG
L
E
S
Y
V
A
D
K
E
F
H
A
P
L
I
I
D
ENGVHEL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
59.38
15%
-104
- C3 -
3QNQ
8
?
A:
[12-430]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
A
G
K
V
A
E
Q
R
H
L
L
A
I
R
D
G
L
V
L
------------
T
M
P
F
L
I
I
G
S
I
F
L
----
I
I
S
T
L
P
I
P
G
Y
S
E
F
----
M
A
-----------
S
L
-
F
--
G
K
--
N
W
--
N
V
A
L
G
Y
P
V
S
A
T
F
N
I
M
A
L
I
A
V
F
G
I
A
Y
R
L
G
E
Y
Y
K
V
D
A
L
A
S
G
A
--
L
S
L
V
T
F
L
L
A
T
P
-
F
Q
V
A
Y
I
M
-
P
G
T
K
E
------
S
I
L
V
D
G
V
I
P
A
A
-
L
M
G
S
Q
G
L
F
--
V
A
M
I
I
A
I
I
S
T
E
I
Y
R
-
F
L
V
Q
K
KM
I
I
K
M
P
E
T
V
P
P
A
V
T
R
S
F
A
-
A
L
I
P
G
F
I
V
V
T
V
V
W
--
I
--
I
R
---
L
I
F
E
H
T
T
F
-
G
------
S
I
H
N
V
V
G
-
K
-
L
L
Q
--------
E
P
L
S
--
I
L
G
A
--------------------
S
L
W
G
A
V
--------
I
A
V
I
L
-------------
V
H
V
L
W
A
C
G
------
I
------
H
-----
G
A
T
I
V
G
G
-
V
M
S
P
I
W
L
S
-----------
L
M
D
Q
N
R
I
A
F
Q
-
A
-
G
Q
D
VPNTITAQ
F
F
D
L
W
I
Y
M
G
G
S
G
-
A
-
T
L
---------
A
L
V
V
G
M
L
L
F
A
R
----
S
Q
Q
L
-------------
K
S
L
G
R
L
S
I
A
P
-------------------------
G
I
F
N
I
N
---
E
M
V
----
T
F
G
M
P
I
V
M
NP
L
L
L
--
I
P
F
-------
I
V
V
P
V
V
L
T
---
I
V
S
Y
F
A
M
E
W
G
-------
L
V
A
R
P
S
GAA----
V
T
W
T
T
P
I
L
F
S
G
Y
L
G
S
--
G
----
G
K
I
S
G
V
I
--------
L
Q
L
V
N
F
A
L
A
-
F
V
I
Y
L
P
F
---
L
K
I
W
D
K
Q
K
I
A
E
E
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
54.88
26%
-66
* C2 *
3BP3
1
PTGCB_ECOLI
A:
[2-81]
----------------------------------------------------------------------------
G
T
S
E
M
A
P
A
------
L
V
A
A
F
G
G
K
E
N
--
I
--
T
N
L
D
A
C
I
T
R
L
R
V
S
V
A
D
--
V
S
K
V
D
Q
A
G
L
K
K
L
-
G
A
A
G
V
V
V
A
G
S
G
-
V
Q
A
I
F
G
T
--
K
-
S
D
N
L
K
T
E
M
D
E
Y
I
R
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
53.18
23%
-88
- C3 -
2HT2
1
CLCA_ECOLI
A:
[252-449]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
W
L
Y
-
L
I
L
--
G
--
I
I
---
F
G
I
F
G
P
I
F
-
N
------
K
W
V
L
G
M
Q
-
D
-
L
L
H
R
V
H
GGN
I
T
K
W
V
L
----
M
G
--------------------
G
A
I
G
G
L
--------
C
-
G
L
L
G
FVAPATSGGGFN
L
I
P
I
A
T
A
G
NFS
M
G
M
L
------
V
-----
F
I
F
V
--
A
R
V
I
----
T
T
-----------
L
L
C
F
S
S
---
G
-
A
-
P
G
G
--------
I
F
A
-
P
M
L
A
L
G
T
V
-
L
-
G
T
---------
A
F
G
M
V
A
V
E
L
F
P
---
Q
Y
H
L
E
-------------
A
G
T
F
A
I
A
G
M
G
-------------------------
A
L
L
A
A
S
-----------------
I
----
R
--
A
P
L
-------
T
G
I
I
L
V
L
E
---
M
T
D
N
Y
Q
L
I
L
P
-------
M
I
I
T
G
L
-------
G
A
T
L
L
A
Q
F
T
G
--
G
K
P
L
H
S
----
A
I
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
50.23
31%
-32
- C2 -
1O2F
-
B:
[314-379]
-------------------------------------------------------------------------------
E
M
A
A
A
------
L
V
A
A
F
G
G
K
E
N
--
I
--
T
N
L
D
A
C
I
T
R
L
R
V
S
V
A
D
--
V
S
K
V
D
Q
A
G
L
K
K
L
G
A
A
-
G
V
V
V
A
G
S
G
-
V
Q
A
I
F
G
T
--
K
S
D
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
48.35
31%
-38
- C2 -
3BP3
1
PTGCB_ECOLI
A:
[5-70]
-------------------------------------------------------------------------------
E
M
A
P
A
------
L
V
A
A
F
G
G
K
E
N
--
I
--
T
N
L
D
A
C
I
T
R
L
R
V
S
V
A
D
--
V
S
K
V
D
Q
A
G
L
K
K
L
G
A
A
-
G
V
V
V
A
G
S
G
-
V
Q
A
I
F
G
T
--
K
S
D
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
47.44
32%
-44
- C2 -
3BP3
1
B:
[7-70]
---------------------------------------------------------------------------------
A
P
A
------
L
V
A
A
F
G
G
K
E
N
--
I
--
T
N
L
D
A
C
I
T
R
L
R
V
S
V
A
D
--
V
S
K
V
D
Q
A
G
L
K
K
L
G
A
A
-
G
V
V
V
A
G
S
G
-
V
Q
A
I
F
G
T
--
K
S
D
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
47.12
32%
-53
- C2 -
3BP8
-
PTGCB_ECOLI
C:
[2-65]
---------------------------------------------------------------------------------
A
P
A
------
L
V
A
A
F
G
G
K
E
N
--
I
--
T
N
L
D
A
C
I
T
R
L
R
V
S
V
A
D
--
V
S
K
V
D
Q
A
G
L
K
K
L
G
A
A
-
G
V
V
V
A
G
S
G
-
V
Q
A
I
F
G
T
--
K
S
D
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
45.41
26%
-29
- C2 -
1IBA
-
A:
[15-92]
--------------------------------------------------------------------------------
M
A
P
A
------
L
V
A
A
F
G
G
K
E
N
--
I
--
T
N
L
D
A
C
I
T
R
L
R
V
S
V
A
D
--
V
S
K
V
D
Q
A
G
L
K
K
L
-
G
A
A
G
V
V
V
A
G
S
G
-
V
Q
A
I
F
G
T
--
K
-
S
D
N
L
K
T
E
M
D
E
Y
I
R
N
F
G
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
40.47
31%
-18
- C2 -
1IBA
-
A:
[15-79]
--------------------------------------------------------------------------------
M
A
P
A
------
L
V
A
A
F
G
G
K
E
N
--
I
--
T
N
L
D
A
C
I
T
R
L
R
V
S
V
A
D
--
V
S
K
V
D
Q
A
G
L
K
K
L
G
A
A
-
G
V
V
V
A
G
S
G
-
V
Q
A
I
F
G
T
--
K
S
D
N
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
35.14
34%
-41
- C2 -
4D5E
2
CHDH_AZOSP
A:
[215-270]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
V
A
R
S
G
G
S
E
-------------------------
A
L
L
K
L
A
---
E
------
M
V
G
V
------------
P
V
-------
V
T
T
S
T
G
A
G
---
V
------
F
P
E
-------
T
H
A
L
A
M
-------
G
S
A
G
F
C
G
W
K
S
--
A
N
D
M
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
35.07
34%
-44
- C2 -
2PGO
2
CHDH_AZOSP
A:
[215-270]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
V
A
R
S
G
G
S
E
-------------------------
A
L
L
K
L
A
---
E
------
M
V
G
V
------------
P
V
-------
V
T
T
S
T
G
A
G
---
V
------
F
P
E
-------
T
H
A
L
A
M
-------
G
S
A
G
F
C
G
W
K
S
--
A
N
D
M
M
A
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------