@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_0096: (2015-12-12 )
MKKLILAVFFTLTLSVSAKEVKIVFLETSDIHGRLFSYDYAVGEQKPNNGLTRIATLIKKQRAENKNVVLIDSGDLLQGNSAELFNDEPIHPLVRAENDLKFDIRVLGNHEFNFSKDFLEKNIKGFNGDVVNANIIKIADNKPFVKPYIIKKIDGVRVAVVGFLVPHVPTWEASTPEHFAGLEFLDAEEALKKTLSELKGKYDILIGAFHLGREDEKGGDGIPDLAKKFPQFDIIFAGHEHAVYNTKVGKVHTIEPGAYGAYLAKGVVVFDTKTKKKIITTENLPTKDAPEDEELAKKYEYVDKKSKEYANEVVGEVTKTFIDRPDFITGEEKITTMPTAALQETPVIELINKVQKYYAKADVSAAALFNFGANLKKGPFKRKDVAYIYKFANTLIGVRITGENLLKYMEWSYKFYNQLQPGDLTISFNENVRGYNFDMFSGVKYQVDVTKPAGQRIINPTINGKPINPKAVYKLAINNYRFGTLSTTLKLVTDADRYYDSYDALQDNGQIRDLIIKYITEEKNAKVTPELEHNWEIINYDFKNPLLEKLAEKLKEGSVKIPTSKDGRTLNVKSIKESEVE

Atome Classification :

(21 SA) ------------------------------.........10.......----.20........30....--..---..40-.--.-.......-----50........60...----..----...70........80--......----------.------..90........100.......110-.......120.......130.....----..140-..-...-------...150-----.----..----....160.......170.......180.......190......--.--200.-........210-..-.--....----------220-....--.....--------------------230.........240---------------..--------------...-------------------.--------------.-----.250........260.......270-------..---......280--------.--.--.----------.---...290---------------------------.........300......--.310.......320.......330....------------..---------.340.......350.......---360.--........370---.------.....-.380........390.-......400.......410.......420.....---..430.......440........450........460--------.----..----....470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------------------MKKLILAVFFTLTLSVSA----KEVKIVFLETSDIHGRL--FS---YDY--A--V-GEQKPNN-----GLTRIATLIKKQRAE----NK----NVVLIDSGDLLQGN---SAELFN----------D------EPIHPLVRAENDLKFDIRVLGNHEF-NFSKDFLEKNIKGFNGDVVNANIIK----IADN--KP-FVK-------PYIIKK-----I----DG----VRVAVVGFLVPHVPTWEASTPEHFAGLEFLDAEEALKKTLSEL--K--G--K-YDILIGAFHLG-RE-D--EKGG----------D---GIPD--LAKKF--------------------P--QFDIIFAGHEH----------------AV--------------YNT-------------------K--------------V-----GK-VHTIEPGAYGAYLAKGVVVF-D-------TK---TKKKIITTE--------N--L--P----------T---KDAP-----------------------------EDEELAKKYEYVDKKSKE--YANEVVGEVTKTFIDRPDFITGEEKITT------------MP---------TAALQETPVIELINKVQKYYA---K--A--DVSAAALFNFG---A------NLKKG-PF-KRKDVAYIYKFAN-TLIGVRITGENLLKYMEWSYKFYNQLQPGDLTIS---FNENVRGYNFDMFS-GVKYQVDVTK-PAGQRIINPTI--------N----GK----PINPKAVYKLAINNYRFGTLSTTLKLVTDADRYYDSYDALQDNGQIRDLIIKYITEEKNAKVTPELEHNWEIINYDFKNPLLEKLAEKLKEGSVKIPTSKDGRTLNVKSIKESEVE
2 PsiBlast_PDB 90.6827% -70 - C1 -4Q7F ? A:[20-478] --------------------------------------------------------IAFYVVSDVHGYI--FP---TDF--T--S-RNQYQPM-----GLLLANHVIEQDRRQ----YD----QSFKIDNGDFLQGSPFCNYLIAH----------S------GSSQPLVDFYNRMAFDFGTLGNHEF-NYGLPYLKDTLRRLNYPVLCANIYENDSTLTDN--G---VK-------YF---Q-----V----GD----QTVGVIGLTTQFIPHWEQ--PEHIQSLTFHSAFEILQQYLPEM--K--R--H-ADIIVVCYHGG-FEKD--LESGTPTEVLTGENE---GYAM--LEAFS--------------------K--DIDIFITGHQH----------------RQ--------------IAE-------------------R--------------F-----KQ-TAVIQPGTRGTTVGRVVLST-D-------EY---ENLSVESCE--------L--L--P----------V---IDDSTFTIDE-----------------------DDQHLRKQLE------------------------DWLDY-----EITT------------LPYDMTINHAFEARVAPHPFTNFMNYALLEKS---D--A--DVACTALFDSA---S------GFKQ--VV-TMRDVINNYPFPN-TFKVLAVSGAKLKEAIERSAEYFD-VKNDEVSVSADFLEPKPQHFNYDIYG-GVSYTIHVGR-PKGQRVSNMMI--------Q----GH----AVDLKQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK---------------------------------------------------
1 PsiBlast_PDB 89.4027% -70 - C1 -3QFK ? A:[20-478] --------------------------------------------------------IAFYVVSDVHGYI--FP---TDF--T--S-RNQYQPM-----GLLLANHVIEQDRRQ----YD----QSFKIDNGDFLQGSPFCNYLIAH----------S------GSSQPLVDFYNRMAFDFGTLGNHEF-NYGLPYLKDTLRRLNYPVLCANIYENDSTLTDN--G---VK-------YF---Q-----V----GD----QTVGVIGLTTQFIPHWEQ--PEHIQSLTFHSAFEILQQYLPEM--K--R--H-ADIIVVCYHGG-FEKD--LESGTPTEVLTGENE---GYAM--LEAFS--------------------K--DIDIFITGHQH----------------RQ--------------IAE-------------------R--------------F-----KQ-TAVIQPGTRGTTVGRVVLST-D-------EY---ENLSVESCE--------L--L--P----------V---IDDSTFTIDE-----------------------DDQHLRKQLE------------------------DWLDY-----EITT------------LPYDMTINHAFEARVAPHPFTNFMNYALLEKS---D--A--DVACTALFDSA---S------GFKQ--VV-TMRDVINNYPFPN-TFKVLAVSGAKLKEAIERSAEYFD-VKNDEVSVSADFLEPKPQHFNYDIYG-GVSYTIHVGR-PKGQRVSNMMI--------Q----GH----AVDLKQTYTICVNNYRAVGGGQYDMYIDAPVVKDIQVEGAQLLIDFLSNNNLMRIPQVVDFKVEK---------------------------------------------------
21 HHSearch 88.6323% -65 - C1 -2Z1A ? A:[28-534] ------------------------------------------------------FTLTLVHTNDTHAHL--EP---VEL--T--LSGEKTPVG-----GVARRVALFDRVWAR----AK----NPLFLDAGDVFQGT---LYFNQ------------------YRGLADRYFMHRLRYRAMALGNHEF-DLGPGPLADFLKGARFKVVSANVDA----SREPRLKG-LFA-------PYAVVV-----V----GG----ERVGIIGLTTPDTREIS--NP--GPTVAFLDPYESAQKAVYEL--LA-K--G-VNKIVVLSHLG-YG-E--D-------------------LK--LARRL--------------------V--GVQVIVGGHSH----------------TL--------------LGSFPHKELSPAGPYPTVVKNPE--------------G-----KD-VLVVQAWEWGKVVGLLEVTF-D-------AK---GELLAYKGE--------ALLM--T----------P---EAAP-----------------------------EDFFAKEALLAYAQPVMA--LMQQVIAEAKVDLVGE------------------------RA---------VVRRRESNLGNLITDGMLWKTRNAG--T--QIALQNGGGIR---A------SIPKG-PI-TVGKVYEVLPFGN-TLVVMDLKGKEILAALENGVSQWEN-----------------TAGRFLQVS-GLRYAFDLSR-PAGSRVVRVEV--------KTEKGYV----PLDLEATYRVVVNNFIANGGDGF-TVLKEAQGYR-----VDTGFSDAESFMDYLKELK--VVEAGLEGRIEVLNEP----------------------------------------
24 HHSearch 83.6521% -63 - C1 -1HP1 USHA_ECOLI A:[3-500] ----------------------------------------------QD----KTYKITVLHTNDHHGHF--WR---NE-----------YGEY-----GLAAQKTLVDGIRKEVAAEGG----SVLLLSGGDINTGV---PESDL------------------QDAEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDDTAKIG--NPEYFTDIEFRKPADEAKLVIQEL--QQTE--K-PDIIIAATHMG-HY-D--NGEHGSNA------P---GDVE--MARAL--------------------PAGSLAMIVGGHSQ----------------DP--------------VCMAAENKKQVDYVPGTPCKPDQ--------------Q-----NG-IWIVQAHEWGKYVGRADFEF-R-------NGE--MKMVNYQLIPVNLKKKRV--L--Y----------T---PEIA-----------------------------ENQQMISLLSPFQNKGKA--QLEVKIGETNGRLEG------------D------------RD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYLTAVAQMKP------------------DSGAYPQFA-NVSFVAK------DGKLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGY-PRLDNKPGY------VNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ------------------------------------------
6 PsiBlast_PDB 82.6026% -58 - C1 -2Z1A ? A:[28-481] ---------------------------------------FTLTL---------------VHTNDTHAHL--EP---VEL--T--LSGEKTPVG-----GVARRVALFDRVWAR----AK----NPLFLDAGDVFQGT---L--YFN----------Q------YRGLADRYFMHRLRYRAMALGNHEF-DLGPGPLADFLKGARFKVVSANV------DASR--EP-RLKGLFA---PYAVVV-----V----GG----ERVGIIGLTTPD--TREISNPG--PTVAFLDPYESAQKAVYELLAK--G--V-NKIVVLS-HLGYGE-D--LK----------------------LARRL--------------------V--GVQVIVGGHSH----------------TLLGSFPHKELSPAGPYPT-------------------V--------------VKNPE-GKDVLVVQAWEWGKVVGLLEVTF-D-------AK---GELLAYKGE--------A--LLMT----------P---EAAP-----------------------------ED-------FFAKEALLA--YAQPVMALMQQVIAEAKVDLVGERAVVR------------R--------------RESNLGNLITDGMLWKT---R--N--AGTQIALQNGGGIRA------SIPKG-PI-TVGKVYEVLPFGN-TLVVMDLKGKEILAALENG-------------VS---QWENTAG-RFLQVS-GLRYAFDLSR-PAGSRVVRVEV--------K----TEKGYVPLDLEATYRVVVNNFIANGGDGFTVLKEAQGYRVDTGFSDAESFMDYLKELKVVEAGLEGRIEVLNEP------------------------------------------------
7 PsiBlast_PDB 82.2422% -60 - C1 -2USH USHA_ECOLI A:[26-498] ------------------------------------------------YEQDKTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---PESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAK-----YFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGS----------NAP-GDVE--MARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--P----------V---N------------------------------------LKKKV------SERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK----------KI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSW--------------------------------------------------
42 Fugue 81.3320% -52 - C1 -3ZTV 5NTD_HAEIN A:[8-573] -----------------------------------------------H----KAVELSILHINDHHSYL--EP---HET--R--I-NLNGQQTKVDIGGFSAVNAKLNKLRKK----YK----NPLVLHAGDAITGT-----LYFT----------L------FGGSADAAVMNAGNFHYFTLGNHEF-DAGNEGLLKLLEPLKIPVLSANVIP----DKSSILYN-KWK-------PYDIFT-----V----DG----EKIAIIGLDTV-NKTVNSSSPG--KDVKFYDEIATAQIMANAL--K--Q--QGINKIILLSHAG----------S----------E---KNIE--IAQKV--------------------N--DIDVIVTGDSHYLYGNDELRSLKLPVIYE--------------YPL-------------------E--------------FKNPNGEP-VFVMEGWAYSAVVGDLGVKF-SPEGIASITR---KIPHVLMSS--------H--K--L----------Q---VKNSEGKWAELTGDERKKALDTLKSMKSISLDDHDAKTDKLIAKYKSEKDR--LAQEIVGVITGSAMPGGSANRIPNKAGS------------NP---------EGSIATRFIAETMYNE---LK---T--V--DLTIQNAGGVR---A------DILPG-NV-TFNDAYTFLPFGN-TLYTYKMEGSLVKQVLEDAMQFALV---------------DGSTGAFPYGA-GIRYEANETPNAEGKRLVSVEVLNKTQ---Q----WE----PIDDNKRYLVGTNAYVAGGK--------------DGYKTFGKLFNDPKYE-----------------------GVDTYLPDAESFIKFMKKHPHFEAYTSSNVKFNAST-------
22 HHSearch 80.2922% -59 - C1 -3IVE ? A:[4-501] -----------------------------------------------------AKDVTIIYTNDLHAHV--EP---YKV--PWIA-DGKRDIG-----GWANITTLVKQEKAK----NK----ATWFFDAGDYFTGP---YISSL------------------TKGKAIIDIMNTMPFDAVTIGNHEF-DHGWDNTLLQLSQAKFPIVQGNIFY----QNSS--KSFWDK-------PYTIIE-----K----DG----VKIGVIGLHGVFAFNDTV-SAATRVGIEARDEIKWLQRYIDEL--K--G--K-VDLTVALIHEG-VP-A--RQSSMDVRRAL---D---KDIQ--TASQV--------------------K--GLDILITGHAH----------------VG--------------TPE-------------------PIK------------V-----GN-TLILSTDSGGIDVGKLVLDY-K-------EKPHNFTVKNFELK--------T--I--Y----------A---DEWK-----------------------------PDQQTKQVIDGWNKKLDE--VVQQTVAQSPVELK-------------------------------------RAYGESASLGNLAADALLAAA---GKNT--QLALTNSGGIR---N------EIPAG-AI-TMGGVISTFPFPN-ELVTMELTGKQLRSLMEHGASLS---------------------NGVLQVSKGLEMKYDSSK-PVGQRVITLTL--------N----GK----PIEDATVYHIATQSFLADGGDGF-TAFTEGKARN-----ITGGYYVYHAVVDYFKAGN--TITDEQLNGMRVKDIK----------------------------------------
20 PsiBlast_PDB 79.2921% -55 - C1 -4H1Y 5NTD_HUMAN P:[25-519] -------------------------------------------------------ELTILHTNDVHSRLEQTS---EDSSKC--V-DASRCMG-----GVARLFTKVQQIRRA----EP----NVLLLDAGDQYQGT---I--WFT----------V------YKGAEVAHFMNALRYDAMALGNHEFDNGVEGLIEPLLKEAKFPILSAN-------ISAS--GP-LASQISGLYLPYKVLP-----V----GD----EVVGIVGYTSKETPF--LSNPG--TNLVFEDEITALQPEVDKL--K--TL-N-VNKIIALGHSG-FE-M--DK-------------------L--IAQKVRGVDVVVGGHSNTFLYTGNPP--SKEVPAGKYPF----------------IV--------------TSD-------------------D--------------G-----RK-VPVVQAYAFGKYLGYLKIEF-D------------ERGNVISSH--------G--N--P----------ILLDSSIP-----------------------------EDPSIKADINKWRIKLDD--YSTQ---ELGKTIV----YLDGSSQSCR------------FR---------ECNMGNLICDAMINNNLRHAD---E--MFWNHVSMCILNGG---GIRSPIDERNDG-TI-TWENLAAVLPFGG-TFDLVQLKGSTLKKAFEHSVHRYGQ--------S---TGE------FLQVG-GIHVVYDLSR-KPGDRVVKLDVLCTSCRVPS----YD----PLKMDEVYKVILPNF-LANGGDGFQMIKDELLRHDSGDQDINVVSTYISKMKVIYPAVEGRIKFS---------------------------------------------------
8 PsiBlast_PDB 79.1922% -60 - C1 -1USH USHA_ECOLI A:[26-498] ------------------------------------------------YEQDKTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---PESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGS----------NAP-GDVE--MARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--P----------V---N------------------------------------LKK----------RVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK-DG--KLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ-------------------------------------------------
11 PsiBlast_PDB 79.1522% -61 - C1 -1HO5 USHA_ECOLI A:[5-473] ----------------------------------------------------KTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---PESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGS----------NAP-GDVE--MARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--P----------V---N------------------------------------LKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK-DG--KLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ-------------------------------------------------
9 PsiBlast_PDB 79.1122% -57 - C1 -1OI8 USHA_ECOLI A:[5-473] ----------------------------------------------------KTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---CESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGS----------NAP-GDVE--MARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--P----------V---N------------------------------------LKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVCKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK-DG--KLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQE------------------------------------------------
12 PsiBlast_PDB 78.9322% -60 - C1 -1HPU USHA_ECOLI A:[5-473] ----------------------------------------------------KTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---PESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGS----------NAP-GDVE--MARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--P----------V---N------------------------------------LKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK-DG--KLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ-------------------------------------------------
10 PsiBlast_PDB 78.8121% -66 - C1 -1HP1 USHA_ECOLI A:[5-464] ----------------------------------------------------KTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---PESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGS----------N---APGDVEMARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--PVNLKKKRVLYT---PEIA-----------------------------ENQQMISLLSPFQNKGKA--QLEVKIGETNGRLEGDRDKVR---------------------------------FVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK-DG--KLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ-------------------------------------------------
44 Fugue 78.7617% -47 - C1 -2WDC ? A:[21-562] YDLPPYGDATLLYFSDLHGQAFPHYFMEPPNLIAPKPLMGRPGYLTGE----AILRYYGVERGTPLAYL--LSYVDFVE--L--A-RTFGPIG-----GMGALTALIRDQKAR----VEAEGGKALVLDGGDTWTNS---GLSLLT----------R------G--EAVVRWQNLVGVDHMV-SHWEW-TLGRERVEELLGLFRGEFLSYNIVD----DLFG--DP-LFP-------AYRIHR-----V----GP----YALAVVGASYPYVKVSH--PESFTEGLSFALDERRLQEAVDKA--R--A--EGANAVVLLSH----------NGM----------Q---LDAA--LAERI--------------------R--GIDLILSGHTH----------------DLTP------------RPW-------------------R--------------V-----GK-TWIVAGSAAGKALMRVDLKLWK-------GG---IANLRVRVL--------P--V--L----------A---EHLP-----------------------------KAEDVEAFLKAQLAPHQD--HLFTPLAVSETLLYKRDTLYS---TWDQ------------LV---------GEAVKAI------------YP---E--V--EVVFSPAVRWG---T------TILPG-QAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTSDPFYQ-----------QGGDVSRVF-GLRYVLDPDA-PTGERVREVEV--------G----GR----PLDPNRRYLAAAYG--------------GRLQRVGEAKPGYEPRPIYEVLAEYLRSVG--RVRVRPEPNVKVIGRNYRLPEVTG--------------------------------
13 PsiBlast_PDB 78.7122% -58 - C1 -4WWL USHA_ECOLI A:[5-473] ----------------------------------------------------KTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---PESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGS----------NAP-GDVE--MARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--P----------V---N------------------------------------LKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK-DG--KLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKPGYVNTGFCDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ-------------------------------------------------
14 PsiBlast_PDB 78.5922% -63 - C1 -1OID USHA_ECOLI A:[5-473] ----------------------------------------------------KTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---PESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGC----------NAP-GDVE--MARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--P----------V---N------------------------------------LKKKVTWEDGKSERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK-DG--KLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKCGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ-------------------------------------------------
15 PsiBlast_PDB 78.0622% -62 - C1 -1OIE USHA_ECOLI A:[5-473] ----------------------------------------------------KTYKITVLHTNDHHGHF--WR---NEY-------GEYGLAA-----QKTLVDGIRKEVAAE----GG----SVLLLSGGDINTGV---PESDLQ----------D--------AEPDFRGMNLVGYDAMAIGNHEF-DNPLTVLRQQEKWAKFPLLSANIYQ----KSTG--ER-LFK-------PWALFK-----R----QD----LKIAVIGLTTDD--TAKIGNPEYFTDIEFRKPADEAKLVIQEL--Q--QTEK-PDIIIAATHMG-HY-DNGEHGC----------NAP-GDVE--MARAL--------------------PAGSLAMIVGGHSQDPVCM-----------AA--------------ENK-------------------KQVDYVPGTPCKPDQQ-----NG-IWIVQAHEWGKYVGRADFEF---------RN---GEMKMVNYQ--------L--I--P----------V---N------------------------------------LKKKV------SERVLYTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRD---------KVRFVQTNMGRLILAAQMDRT---G--A--DFAVMSGGGIR---D------SIEAG-DI-SYKNVLKVQPFGN-VVVYADMTGKEVIDYL----TAVAQMKPDSGA--------------YPQFA-NVSF---VAK-DG--KLNDLKI--------K----GE----PVDPAKTYRMATLNFNATGGDGYPRLDNKCGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQE------------------------------------------------
26 HHSearch 77.7731% -59 - C1 -3JYF ? A:[4-338] -----------------------------------------------A----ATVDLRIMETTDLHSNM--MD---FDY--Y--K-DAATEKF-----GLVRTASLIEQARAE----VK----NSVLVDNGDVIQGS---PLGDYM----------AAKGLKEGDVHPVYKAMNTLNYAVGNLGNHEF-NYGLDFLHKALAGAKFPYVNANIID----AKTG--KP-MFT-------PYLIQDTRVVDS----DGQIHTLRIGYIGFVPPQIMTWDK--ANLNGKVTVNDITETARKYIPEM--RA-K--G-ADVVVVVAHSG-LS-A--DPYQ----------AMAENSVY--YLSQV--------------------P--GVDAIMFGHAH----------------AV--------------FPG-------------------KDFANIKGADIAKGTL-----NG-VPAVMPGMWGDHLGVVDLVL-N-------NDSGKWQVTQSKAE--------A--R--PIYDAVAK---K---SLAA-----------------------------EDGKLVSVLKADHDATRE--FVSK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 77.5119% -61 - C1 -2WDC ? A:[99-559] -----------------------------------------------------------------------------------------GPIG-----GMGALTALIRDQKARVEAEGG----KALVLDGGDTWTNS---GLSLL------------------TRGEAVVRWQNLVGVDHMV-SHWEW-TLGRERVEELLGLFRGEFLSYNIVD----DLFG--DP-LFP-------AYRIHR-----V----GP----YALAVVGASYPYVKVSH--PESFTEGLSFALDERRLQEAVDKA--RA-E--G-ANAVVLLSHNG-MQ-L--D-------------------AA--LAERI--------------------R--GIDLILSGHTH----------------DL--------------TPR-------------------PWR------------V-----GK-TWIVAGSAAGKALMRVDLKL-W-------KG---G-IANLRVR--------V--L--PVL--------A---EHLP-----------------------------KAEDVEAFLKAQLAPHQD--HLFTPLAVSETLLY-------------------------------------KRDTLYSTWDQLVGEAVKAIY------P--EVEVVFSPAVR---WGT----TILPGQAI-TWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTSDPF-----------YQQGGDVSRVF-GLRYVLDPDA-PTGERVREVEV--------G----GR----PLDPNRRYLAAAYGGRLQRVGE-------AKPG-------YEPRPIYEVLAEYLRSVG--RVRVRPEPNVKVIGRNYRLPEVTG--------------------------------
27 HHSearch 76.2730% -53 - C1 -3GVE NTPES_BACSU A:[8-340] ----------------------------------------------------PQVHLSILATTDIHANM--MD---YDY--Y--S-DKETADF-----GLARTAQLIQKHREQ----NP----NTLLVDNGDLIQGN---PLGEYAVKYQKDDIISG------TKTHPIISVMNALKYDAGTLGNHEF-NYGLDFLDGTIKGADFPIVNANVKT----TS-G--EN-RYT-------PYVINEKTLIDENGNEQK----VKVGYIGFVPPQIMTWDK--KNLEGQVQVQDIVESANETIPKM--KA-E--G-ADVIIALAHTG-IE-K--QAQSSGAE------N---AVFD--LATKT--------------------K--GIDAIISGHQH----------------GL--------------FPS-------------------AEYAGVAQFNVEKGTI-----NG-IPVVMPSSWGKYLGVIDLKL-E-------KADGSWKVADSKGS--------I--E--SI---------AG--NVTS-----------------------------RNETVTNTIQQTHQNTLE--YVRK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------