@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_0380: (2015-12-14 )
MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQKDFVNYIVEEVNQKEVDMVLIGGDLVDENIEKVKSFLLPLNNLKSTHGTFYVPGNHEYYHGIEPILSFLNTLDMTILGNECVHLGGINLCGVYDYFARKRQDFAPDIDKALKKRDSSKPTILLAHQPKQIRSLKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA

Atome Classification :

(20 SA) -----......-----------...10........20.....---...30.--------..-.....40........50...------.....60.-.......70..-......80.....------...90........100.......110......--...120.......130-........-----140--.-.......150.......--------160--------------------.---------........170.--.--.....180......-.190------.-------------------------....----...200.----------------.--..-..--.----210..-----------.....220...-----------------.---.--..-.-.-230---------------------...-.-----.-----..-..-----240-------.-.----------.------.------.--.--...250--........------------------.-------------260----.--------..-..-----....---270.-.--.-....---280....--.----------------..--290.------------------.-------------...-....300..---.....310..---.-..-..320........330-.-......--------.340.......350...--....360.......370
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----MLISIA-----------FLLVLCLLNYSSFRMLKSFL---TLKKIS--------RY-AYLGFFILLSAGEATFVFYR------NVMPSHLF-VLTSACSFVSF-IAFVFSLSFYGFS------YSVEKIDFLPSRRKGLKNFLRIGF--YLALLG--YFWRGFYEGLARPKI--KETPIYLD-----KL---D-KELKIILLTDMHVGSLL--------Q----------------------K---------DFVNYIVEEVNQ--K--EVDMVLIGGDLVDE-NI-E------K-------------------------VKSF----LLPLNNL----------------K--ST-HG--T----FYVPG-----------NHEYYH--GIE-----------------P---I--LS-F-L-N-----------------------TLD-M-----T-----IL-GN-----E---------C-V----------H------L------G--G--INLC----GVYDYFAR------------------K-------------R------Q--------DF-AP-----DIDK---ALKK-R--D-SSKP---TILLAHQ--P----------------KQ--I--R------------------S-------------LKE-SHSIDLVLS---GHTHAGQIFP---F-SL-LVKL-AQTYLHGLYK--H-SGTTQI--------YVSSGAGYWGIPLRFLA--PSEIAYLRLLPKNQA
50 Fugue 81.4917%-114 - C2 -4J1Q A:[20-445] HMERLMLEPVWEKQNEELSYTEHIIVLFETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAG------RIIIQAIV-PLEKEKQLFAG-VSGLFKTAEIEFSKLTAQVIEIEKPEEMIDLHLKLKDDSRRPFDKQIRYEAGYRFVKGWREMVDTLHMPWRDEGVYLITGGAGSL---G-LLFAKEIANRTGRSTIV--------LTGRSVL----------------S---------EDKENELEALRS--I--GAEVVYREADVSDQ----H------A-------------------------VRHL----LEEIKER----------------Y--GTLNG--I----IHGAGSSKDRFIIHKTNEEFQE--VLQ-----------------P---K--VS-G-L-L-----------------------HVD-E-----C-----SK-DF-----PLDF------F-I----------F------F------S--S--VSGCLGNAGQADYAAA---------------------------------------N--------SF-MD-----AFAE---YRRS-L--A-ASKKRFGSTISFNW--P----------------L---------------------------------------WEE-GGM----QV---GAEDEKRMLK---T-TG-MVPMPTDSGLKAFYQGIV-SDKPQV--------FVMEG-------------------QLQKMKQKLL
25 HHSearch 80.6520%-106 - C2 -3D03 ? A:[1-203] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLLAHISDTHFRSRG--------E----------------------KLYGFIDVN-AANADVVSQLNA--LRERPDAVVVSGDIVNC-GR-PE-----E-------------------------YQVA----RQILGSL--------------------N-YP--L----YLIPG-----------NHDDKA--LFL-----------------E---Y--LQ-P-L-CP----------------------QLG-S-----D-----A--NN-----M---------R-C----------A------VDD----F--A--TRLL----FIDSSRAGTSKGW-------------L-------------T------D--------ET-IS-----WLEA---QLFE-G----GDKP---ATIFMHH--P----------------PL--P--LGNAQMDPIACENGHRLL-A-------------LVERFPSLTRIFC---GHNHSLTMTQ---Y-RQ-ALIS-TLPGTVHQVP--Y-CHADTD--------PYYDLSPASCLMHRQVG--EQWVSYQHSLAHYAG
36 HHSearch 75.6326% -87 - C2 -3T1I MRE11_HUMAN A:[30-274] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E-NTFKILVATDIHLGFME--------KDAVRGNDT--------------F---------VTLDEILRLAQE--N--EVDFILLGGDLFHE-NK-P------SRKT----------------------LHTC----LELLRKYCMGDRPVQFEILSDQLN--IS-IP--V----FSIHG-----------NHDDPT--GAD-----------------ALC-A--LD-I-L-S-----------------------CAG-FV----N-----HF-GR-----SMSVEKIDISP-V----------L------LQK----GSTK--IALY----GLGSIPDE------------------R-------------LYRMFV-N--------KK-VT-----MLRP---KE---D--E-NSWF---NLFVIHQ--N----------------RS--K--HGSTNFIPE----------Q-------------FLD--DFIDLVIW---GHEHECKIAP---T-KN-EQQL-FYISQPGSSV--V-TSLSPG--------EAVKKHVGLLRIKGRKM--NMHKIPLHTVRQFFM
28 HHSearch 73.6517% -88 * C2 *2XMO ? A:[37-289] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D-RNLSMVVTTDVHYFAPS--------LTDNGKAFEKYVAAGDGKQLAYSD---------EITDAFLADVES--K--KTDVLIISGDLTNN-GE-KT-----S-------------------------HEEL----AKKLTQV----------------EK-NG-TQ--V----FVVPG-----------NHDINN--PWARKFEKDKQLPTDTISPTD---F--SK-I-Y-S-----------------------DFG-Y-----ED----AI-SSDEFSLS---------Y-L----------A------APS----S--K--VWLL----MLDTAIYK------------------TNMQQGNPTTEGGLT------A--------GT-LD-----WIKE---SSAL-A--KKNGAK---LIPVLHH--N----------------LT--D--HNDVKGYTINYNQQVI---D-------------ALT-EGAMDFSLS---GHIHTQNIRS---A-KS-TDGK-EITDIVTNAL--S-VFPHKY--------GNITYSAKNKNFTYQSQ--KLDMEAWAKAQGSTD
33 HHSearch 72.1921%-109 - C2 -1II7 MRE11_PYRFU A:[1-215] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKFAHLADIHLGYEQ--------FHKPQREEEF-------------A---------EAFKNALEIAVQ--E--NVDFILIAGDLFHS-SR-PSPG---T-------------------------LKKA----IALLQIP----------------KE-HS-IP--V----FAIEG-----------NHDRTQ--RGP-----------------S---V--LN-L-L-E-----------------------DFGLV-----Y-----VI-GM-----RKEKVENE--Y-LTSERLGNGEYL------VKGVY--K--D--LEIH----GMKYMS-----------------------------------------------------SA-----WFEANKEILKRLF--R-PTDN---AILMLHQ--G----------------VR--E--V------------------SEARGEDYFEIGLGDLP--EGYLYYAL---GHIHKRYETS---Y-SG-SPVV-YPGSLERWDF--G-DYEVRY--------EWDGIKFKERYGVNKGF--YIVEDFKPRFVEIKV
45 Fugue 71.5115% -94 - C2 -2HY1 CPDA_MYCTU A:[12-267] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P---R-PDYVLLHISDTHLID----------A----------------------D---------DRLGELLEQLNQSGL--RPDAIVFTGDLADKGEP-A------A-------------------------YRKL----RGLVEPF----------------A--AQ-LGAEL----VWVMG-----------NHDDRA--ELR-----------------K---F--LL-D-E-A-----------------------PSM-A-----P-----L---D-----R---------V-C----------M------I------D--G--LRII----VLDTSVPG------------------HHHGEI--------R------A--------SQ-LG-----WLAE---ELAT-P--A-PDGT---ILALHHP--PIPSVLDMAVTVELRDQAA--L--G------------------R-------------VLR-GTDVRAILA---GHLHYSTNATFVGI-PV-SVAS-ATCGCNLVHV--Y-PDTVVH--------SVIP------------------------------
32 HHSearch 70.9919% -83 - C2 -3THO RAD50_THEMA B:[1-250] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKILHTSDWHLGVTS--------WTSSRPVDRREEL----------K---------KALDKVVEEAEK--R--EVDLILLTGDLLHS-RNNPSVV---A-------------------------LHDL----LDYLKRM----------------M--RT-AP--V----VVLPG-----------NQDWKG--LK------------------L---F--GN-F-V-TSI---------------------SSD-I-----T-----FVMSF-----E---------P-V----------D------VEAKR--GQ-K--VRIL----PFPYPDES----------------------------------------KNEGDFRFFL-ES-----RLNK---LYEEAL--K-KEDF---AIFMGHF--T----------------VE--G--L------------------AGREIIINR-----ALI-PSVVDYAAL---GHIHSFREIQ---KQPL-TIYP-GSLIRIDFGE--EADEKGAV--------FVELKRGEPPRYERIDA--SPLPLKTLYYKKIDT
37 HHSearch 69.2818% -75 - C2 -2QFP PPAF_PHAVU A:[106-355] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSFITP-----PQTGLD-VPYTFGLIGDLGQSFDS--------N--------------------------------TTLSHY--ELSP--K--KGQTVLFVGDLSYA-DR-YPNHDNVR-------------------------WDTW----GRFTERS----------------V--AY-QP--W----IWTAG-----------NHEIEF--APEINETE------------P---F--KP-F-S-Y-----------------------RYH-V-----PYEASQST-SP-----F---------W-Y----------S------IKR----A--S--AHII----VLSSYSAYG-----------------R-------------G------T--------PQ-YT-----WLKK---ELRK-VKRS-ETPW---LIVLMHS--P----------------LY--N--SYNHHFMEGEAMRTKFE--A-------------WFV-KYKVDVVFA---GHVHAYERSE---RVSN-IAYK-ITNGLCTPVK----DQSAPV--------YITIGDAGNYGVIDSNM--IQPQPEYSAFREASF
29 HHSearch 68.7419% -87 - C2 -1UF3 ? A:[4-194] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TVRYILATSNPMGDL-------------------------------------------EALEKFVKLAPD--T--GADAIALIGNLMPK-AA-KSR----D-------------------------YAAF----FRILSEA--------------------H-LP--T----AYVPG-----------PQDAPI--W-E-----------------Y---L--RE-A-A-NVELV-------------------HPE-M-----R-----NV-HE-----T---------FTF----------W------R------G--P--YLVA----GVGGEIAD------------------E-------------GEPEEHEA--------LRYPAWVAEYRLKA---LWEL----K--DYP---KIFLFHT--M----------------PY--H--KGLNEQGSHEVA-------H-------------LIK-THNPLLVLVAGKGQKHEMLGAS---W-VV-VPGD-LSEGEYSLLD--L-RARKLE--------TGNVR-----------------------------
26 HHSearch 68.4720%-104 - C2 -3AV0 MRE11_METJA A:[18-213] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-SHMMFVHIADNHLGYRQ--------Y----------------------NLDDREKDIYDSFKLCIKKILE--I--KPDVVLHSGDLFND-LR-PPVK---A-------------------------LRIA----MQAFKKL----------------HE-NN-IK--V----YIVAG-----------NHEMPR--RLGEE---------------S---P--LA-L-L-K-----------------------D-Y-V-----K-----IL-DG-----K---------DVI----------N------VN-----GE-E--IFIC----GTYYHKKS------------------K-------------R------E--------EM-LD-----KLKN---FESE-A--K-NYKK---KILMLHQ--G----------------IN--P--YIPLDYEL-----------E-------------HFD-LPKFSYYAL---GHIHKRILER---F-ND-GILA-YSGSTEIIYR--N-EYEDYK--------KEGKGFYLVDFSGNDLD--ISDIEKIDIECREFV
24 HHSearch 67.3517% -85 - C2 -3IB7 CPDA_MYCTU A:[16-226] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRAA-----EHP--R-PDYVLLHISDTHLIGGDRRLYGAVDA----------------------D---------DRLGELLEQLNQSGL--RPDAIVFTGDLADK-GE-PA-----A-------------------------YRKL----RGLVEPF----------------AAQLG-AE--L----VWVMG-----------NHDDRA--ELR-------------------------K-F-L-L-----------------------DEA-P-----S------M-AP-----L---------D-RVC--------M------I------D--G--LRII----VLDTSVPG------------------HHHGEI--------R------A--------SQ-LG-----WLAE---ELAT-P--A--PDG---TILALHH--P----------------PI--P--SVLDMAVTVELRDQAALG-R-------------VLR-GTDVRAILA---GHLHYSTNAT---F-VG-IPVS-VASATCYTQD--L-TVAAGG--------TRGRDGAQGCNLVHVYP--DTVVHSVIPLGGGET
38 HHSearch 65.8516% -76 - C2 -1XZW PPAF1_IPOBA A:[114-363] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WFVTP-----PKPGPD-VPYVFGLIGDIGQTHDS--------N--------------------------------TTLTHYEQ--NS--A--KGQAVLFMGDLSYS-NR-WPNHDNNR-------------------------WDTW----GRFSERS----------------V--AY-QP--W----IWTAG-----------NHEIDY--APDIGEYQ------------P---F--VP-F-T-N-----------------------RYP-TPHEASG-----SG-DP-----L---------W-Y----------A------IKR----A--S--AHII----VLSSYSGFV-----------------K-------------Y------S--------PQ-YK-----WFTS---ELEK-VNRS-ETPW---LIVLVHA--P----------------LY--N--SYEAHYMEGEAMRAIFE--P-------------YFV-YYKVDIVFS---GHVHSYERSE---R-VSNVAYN-IVNAKCTPVS----DESAPV--------YITIGDGGNSEGLASEM--TQPQPSYSAFREASF
8 PsiBlast_PDB 64.4124% -55 - C2 -4TUG MRE11_METJA C:[46-229] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVVLHSGDLFND-LR-P------P-------------------------VKAL----RIAMQAF----------------K--KL-HE--NNIKVYIVAG-----------NHEMPRRLGEE-----------------S---P--LA-L-L-K-----------------------DYV-K-----I-----LD-GK-----D---------V-I----------N------V------N--GEEIFIC----GTYYHKKS------------------K-------------R------E--------EM-LD-----KLKN---FESE-A--K-NYKK---KILMLHQ--G----------------INPYI--P------------------L-------------DYE-LEHFDLPKF---SYYALGHIHK----------RI-LERFNDGILA--Y-SGSTEIIYRNEYEDYKKEGKGFYLVDFSGND--LDISDIEKIDIECRE
30 HHSearch 63.2312% -44 - C2 -2YVT - ? A:[4-224] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPRKVLAIKNFKERFD-------------------------------------------LLPKLKGVIAE--K--QPDILVVVGNILKN-EA-L------EKEYERAHLARREPNRKVIHENEHYIIETL----DKFFREI----------------GE-LG-VK--T----FVVPG-----------KNDAPL--KIF-----------------L---R--AA-YEAETA----------------------YPN-I-----R-----VL-HE-----G---------F-AG---------W------R------G--E--FEVI----GFGGLLTE------------------HE------------FE-----EDFVLKYPRWY-VE-----YILK---FVNE-L----KPRR---LVTIFYT--P----------------PI--G--EFVDRTPEDPKHHGSAVVNT-------------IIK-SLNPEVAIV---GHVGKGHELV---G-NT-IVVN-PGEFEEGRYA--F-LDLTQH--------KIKLEQFS--------------------------
34 HHSearch 63.1518% -88 - C2 -3RL5 MPPD2_RAT A:[57-277] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-GHTRFVCISDTRSRTDG--------------------------------------------------IQM--P--YGDILLHTGDFTEL-GL-PS-----E-------------------------VKKF----NDWLGNL----------------P---Y-EY--K----IVIAG-----------NHELTF--DKE-----------------F---M--AD-L-V-KQDYYRFPSVSKLKPEDFDNVQSLLTN-S-----I-----YL-QD-----S---------E-V----------T------V------K--G--FRIY----GAPWTPW-GWGF--------------N-------------L------P--------RG-QS-----LLDK----WNL-I----PEGT---DILMTHG--P----------------PL--G--FRDWVPKELQRVGCVELLNT-------------VQR-RVRPKLHVF---GGIHEGY----------------------GTMT-----DGYTT--------YINASTCTVSFQPTNPP--IIFDLPNP-------
7 PsiBlast_PDB 62.8924% -52 - C2 -3AUZ MRE11_METJA A:[62-245] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVVLHSGDLFND-LR-P------P-------------------------VKAL----RIAMQAF----------------K--KL-HE--NNIKVYIVAG-----------NHEMPRRLGEE-----------------S---P--LA-L-L-K-----------------------DYV-K-----I-----LD-GK-----D---------V-I----------N------V------N--GEEIFIC----GTYYHKKS------------------K-------------R------E--------EM-LD-----KLKN---FESE-A--K-NYKK---KILMLHQGIN----------------PY--I--P------------------L-------------DYE-LEHFDLPKF---SYYALGHIHK----------RI-LERFNDGILA--Y-SGSTEIIYRNEYEDYKKEGKGFYLVDFSGND--LDISDIEKIDIECRE
40 HHSearch 62.3519% -95 - C2 -1S3L P936_METJA A:[26-183] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKIGIMSDTHDHL-------------------------------------------PNIRKAIEIFND--E--NVETVIHCGDFVSL-F--------------------------------------V----IKEFENL--------------------N-AN--I----IATYG-----------NNDGER--CKL------------------------KE-W-L-K------------------------------------------------------------------------D------I------N--E--ENII---------------------------------------------------------------DD-----FISV-----------E-IDDL---KFFITHG--H----------------HQ--SVLE------------------M-------------AIK-SGLYDVVIY---GHTHERVFE-----------------------E----V-DDVL--------VINPGECCG---YLTG---IPTIGILDTEKKEYR
49 Fugue 61.6117% -76 - C2 -4Q0W RAD2_YEAST A:[1-362] -----------------------------GVHSFWDIAGPTA---RPVRLE--------SL-E--DKRMAVDASIWIYQFLKAVRDQNAVKNSHITGFFRRICKLLYFGIRPVFVFDGGVPV------LKRETIRQRKERRQGKRE-----------------------DEVTMDMI--KEVQELLS-----RF---GIPYITAPMEAEAQCAELL--------Q----------------------L---------NLVDGIITDDS--------DVFLFGGTKIYK-NM-----------------------------------------------FH----------------E--KN-YV--E----FYDAE-----------SILKLL--G--------------------------LD-R-K-N-----------------------MIE-L-----A-----QLLGS-----D---------Y-T----------NG-----L------K--G--MGPV----SSIEVIAE------------------F-------------GNL----K--------NF-KD-----WYNN---GQFD-K--R-KQET---E---NKF--E----------------KD--L--R------------------K-------------KLV-NNEIILDDD---FPS----------------VMV-YDAYMRPEVD--H-DTTPFV--------WGVPDLDMLRSFMKTQLGWPHEKSDEILIPLI--
35 HHSearch 61.4814% -87 - C2 -3TGH ? A:[2-240] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CQLRFASLGDWGKDTKG--------Q----------------------I---------LNAKYFKQFIKN--E--RVTFIVSPGSNFID-GV-KGL----N-------------------------DPAWKNLYEDVYSEE----------------KGDMY-MP--F----FTVLG-----------TRDWTG--NYN-----------------AQ--LLKGQG-----DATN-------------------YPK-W-----I------M-PN-----Y---------W-Y----------HYFTHFTVSHKD--L--A--AAFI----FIDTWVLSSNFPYKK-----------I-------------H------E--------KA-WN-----DLKS---QLSV-AK-K-IADF---IIVVGDQ--P----------------IY--S--SGYSRGSSYLAYYLL----P-------------LLK-DAEVDLYIS---GHDNNMEVIE---D-ND-MAHI-TCGSGSMSQG--K-SGMKNS--------KSLFFSSDIGFCVHELS--NNGIVTKFVSSKKGE
27 HHSearch 61.3416% -87 - C2 -1UTE PPA5_PIG A:[4-227] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-PILRFVAVGDWGGVPNA--------P----------------------FHTAREM---ANAKAIATTVKT--L--GADFILSLGDNFYF-TG-VHDA---K-------------------------DKRF----QETFEDVFSDPS-----------L--RN-VP--W----HVLAG-----------NHDHLG--NVS-----------------AQIAY--SK-I-S-K-----------------------RWN--------------F-PS-----P---------Y-YRL--------R------FKIPRSNV--S--VAIF----MLDTVTLCGNSDDFVSQQPERPRNLAL-------------A------R--------TQ-LA-----WIKK---QLAA-A----KEDY---VLVAGHY--P----------------VW--S--IAEHGPTHCLVKQLL----P-------------LLT-THKVTAYLC---GHDHNLQYLQ---D-EN-GLGF-VLSGAGNFMD--P-SKKHLR--------KVPNGYLRFHFGAENSL--GGFAYVEITPKEMSV