@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : jhp_0549: (2015-12-16 )
MLDSFEILKALKSLDLLKNAPAWWWPNALKFEALLGAVLTQNTKFEAVLKSLENLKNAFILENDDEINLKKIAYIEFSKLAECVRPSGFYNQKAKRLIDLSKNILKDFQSFENFKQEVTKEWLLDQKGIGKESADAILCYVCAKEVMVVDKYSYLFLKKLGIEIEDYDELQHFFEKGVQENLNSALALYENTISLAQLYARFHGKIVEFSKQKLELKL
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------.........10......-..20.-------.----..-.---------...-30........40...-----.---....50......--..60.---.-------.------..------.--.--.70........80...---------.--.---------..--.90........100..--.----.-----...110--..-.......120..-.-.-...130.......140.--.------.-....150.......160..-.--.--------....170.......180--.......190.......200.......210......---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------ML
D
S
F
E
I
L
K
A
L
K
S
L
D
L
L
-KNAPA-------W----WW-P---------NA
L
-
K
F
E
A
L
L
G
A
V
LTQN
T
K
-----
F
---
E
A
V
L
K
S
L
E
N
L
K
N--
A
F
I
LE---N-------D------DE------I--
N
--
L
K
K
I
A
Y
I
E
F
S
K
L
A
E
C
V---------R--P---------SG--
F
Y
N
Q
K
A
K
R
L
I
D
L
S
K
N
I
--
L
----
K
-----
D
F
Q
S
----
F
E
-
N
F
K
Q
E
V
T
K
E
W
LL-D-Q-KGIGKESA
D
A
I
L
C
Y
V
C
A
--
K
------
E
-
V
M
V
VD
K
Y
S
Y
L
F
L
K
K
L-GIE-I--E--------
D
Y
D
E
L
Q
H
F
F
E
K
G
V
Q
E
N
L
--
N
S
A
L
A
L
Y
E
N
T
I
S
L
A
Q
L
Y
A
R
FH
G
K
I
V
E
FSK
Q
K
L
ELKL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
88.08
17%
-74
- C3 -
1KEA
8
GTMR_METTF
A:
[9-200]
--------------------------------------------------------------------------------------------------------------------------------------------------------
R
K
V
F
V
S
T
I
L
T
F
W
N
T
D
R
R
D
F
P
------------
W
R
-
H
---------
T
R
D
-
P
Y
V
I
L
I
T
E
I
L
L
R
R
T
T
-----
A
---
G
H
V
K
K
I
Y
D
K
F
F
V
--
K
Y
K
-------------------------------
C
--
F
E
D
I
L
K
T
P
K
S
E
I
A
K
D
I
---------
K
--
E
---------
I
G
--
L
S
N
Q
R
A
E
Q
L
K
E
L
A
R
V
V
--
I
----
N
-----
D
Y
G
G
---------
R
V
P
R
N
R
K
A
I
L
-
D
-
L
-
P
G
V
G
K
Y
T
C
A
A
V
M
C
L
A
F
G
--
K
------
K
-
A
A
M
V
D
A
N
F
V
R
V
I
N
R
Y
-
F
G
G
-
S
--
Y
ENLNY---
N
H
K
A
L
W
E
L
A
E
----
T
L
V
--
P
G
------------
G
K
C
R
D
F
N
L
G
L
M
D
F
S
A
I
I
C
A
P
R
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
83.45
16%
-83
- C3 -
1ORN
5
?
A:
[9-195]
-------------------------------------------------------------------------------------------------------------------------------------------------------
Q
I
R
Y
C
L
D
E
M
A
K
M
F
---
P
D
A
H
C
------------
E
L
-
V
---------
H
R
N
-
P
F
E
L
L
I
A
V
V
L
S
A
Q
C
T
-----
D
---
A
L
V
N
K
V
T
K
R
L
F
E
--
K
Y
R
-------------------------------
T
--
P
H
D
Y
I
A
V
P
L
E
E
L
E
Q
D
I
---------
R
--
S
---------
I
G
--
L
Y
R
N
K
A
R
N
I
Q
K
L
C
A
M
L
--
I
----
D
-----
K
Y
N
G
---------
E
V
P
R
D
R
D
E
L
M
-
K
-
L
-
P
G
V
G
R
K
T
A
N
V
V
V
S
V
A
F
G
--
V
------
P
-
A
I
A
V
D
T
H
V
E
R
V
S
K
R
L
-
G
F
C
-
R
WD
D
--------
S
V
L
E
V
E
K
T
L
M
----
K
I
I
--
P
K
------------
E
E
W
S
I
T
H
H
R
M
I
F
F
G
R
Y
H
C
K
A
Q
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
80.27
16%
-73
- C3 -
3N5N
1
MUTYH_HUMAN
X:
[15-215]
--------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
A
F
R
G
S
L
L
S
W
Y
D
Q
E
K
R
-
D
--------
L
----
P
W
-
R
RRAEDEMDL
D
R
R
-
A
Y
A
V
W
V
S
E
V
M
L
Q
Q
T
Q
-----
V
---
A
T
V
I
N
Y
Y
T
G
W
M
Q
--
K
W
P
-------------------------------
T
--
L
Q
D
L
A
S
A
S
L
E
E
V
N
Q
L
W
---------
A
--
G
---------
L
G
--
Y
Y
S
-
R
G
R
R
L
Q
E
G
A
R
K
V
--
V
----
E
-----
E
L
G
G
---------
H
M
P
R
T
A
E
T
L
Q
-
Q
L
L
-
P
G
V
G
R
Y
T
A
G
A
I
A
S
I
A
F
G
--
Q
------
A
-
T
G
V
V
D
G
N
V
A
R
V
L
C
R
V
-
R
A
I
-
G
--
A
DPSSTL--
V
S
Q
Q
L
W
G
L
A
Q
----
Q
L
V
--
D
P
------------
A
R
P
G
D
F
N
Q
A
A
M
E
L
G
A
T
V
C
T
P
Q
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
HHSearch
80.20
14%
-78
- C3 -
2ABK
1
END3_ECOLI
A:
[5-190]
-------------------------------------------------------------------------------------------------------------------------------------------------------
K
R
L
E
I
L
T
R
L
R
E
N
N
---
P
H
P
T
T
------------
E
L
-
N
---------
F
S
S
-
P
F
E
L
L
I
A
V
L
L
S
A
Q
A
T
-----
D
---
V
S
V
N
K
A
T
A
K
L
Y
P
--
V
A
N
-------------------------------
T
--
P
A
A
M
L
E
L
G
V
E
G
V
K
T
Y
I
---------
K
--
T
---------
I
G
--
L
Y
N
S
K
A
E
N
I
I
K
T
C
R
I
L
--
L
----
E
-----
Q
H
N
G
---------
E
V
P
E
D
R
A
A
L
E
-
A
-
L
-
P
G
V
G
R
K
T
A
N
V
V
L
N
T
A
F
G
--
W
------
P
-
T
I
A
V
D
T
H
I
F
R
V
C
N
R
T
-
Q
F
A
-
P
G-
K
--------
N
V
E
Q
V
E
E
K
L
L
----
K
V
V
--
P
A
------------
E
F
K
V
D
C
H
H
W
L
I
L
H
G
R
Y
T
C
I
A
R
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
80.08
16%
-73
- C3 -
3FSP
4
?
A:
[11-204]
------------------------------------------------------------------------------------------------------------------------------------------------------
F
P
A
R
E
F
Q
R
D
L
L
D
W
F
A
R
E
R
R
-
D
--------
L
----
P
W
-
R
K--------
D
R
D
-
P
Y
K
V
W
V
S
E
V
M
L
Q
Q
T
R
-----
V
---
E
T
V
I
P
Y
F
E
Q
F
I
D
--
R
F
P
-------------------------------
T
--
L
E
A
L
A
D
A
D
E
D
E
V
L
K
A
W
---------
E
--
G
---------
L
G
--
Y
Y
S
-
R
V
R
N
L
H
A
A
V
K
E
V
--
K
----
T
-----
R
Y
G
G
---------
K
V
P
D
D
P
D
E
F
S
-
R
-
L
-
K
G
V
G
P
Y
T
V
G
A
V
L
S
L
A
Y
G
--
V
------
P
-
E
P
A
V
D
G
N
V
M
R
V
L
S
R
L
-
F
L
V
-
T
DD
I
AK
P
S
----
T
R
K
R
F
E
Q
I
V
R
----
E
I
M
--
A
Y
------------
E
N
P
G
A
F
N
E
A
L
I
E
L
G
A
L
V
C
T
P
R
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
HHSearch
75.76
20%
-65
- C3 -
3FHF
-
OGG1_METJA
A:
[34-206]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
E
E
-
W
F
K
E
L
C
F
C
I
L
T
A
N
F
T
-----
A
---
E
G
G
I
R
I
Q
K
E
I
G
D
--
G
F
L
---------------------------------------
T
L
P
R
E
E
L
E
E
K
L
---------
K
N
L
G
---------
H
R
--
F
Y
R
K
R
A
E
Y
I
V
L
A
R
R
F
K
N
I
K
----
D
-----
I
V
E
S
-------
F
E
N
E
K
V
A
R
E
F
L
V
R
N
-
I
-
K
G
I
G
Y
K
E
A
S
H
F
L
R
N
V
-
G
--
Y
D-----
D
-
V
A
I
I
D
R
H
I
L
R
E
L
Y
E
N
-
N
Y
I
-
D
--
E
IPKTLS
R
R
K
Y
L
E
I
E
N
I
L
R
----
D
I
G
--
E
E
--------
V
N
L
K
L
S
E
L
D
L
Y
I
W
Y
L
R
T
G
K
V
L
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
HHSearch
74.22
24%
-90
- C3 -
3FHG
12
OGG1_SULSO
A:
[29-159]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
---------
E
E
V
-
W
F
R
E
L
T
L
C
L
L
T
A
N
S
S
-----
F
---
I
S
A
Y
Q
A
L
N
C
L
G
Q
--
K
I
Y
---------------------------------------
Y
A
N
E
E
E
I
R
N
I
L
---------
K
--
S
---------
C
K
YR
F
Y
N
L
K
A
K
Y
I
I
M
A
R
E
K
V
--
Y
----
G
-----
R
L
K
E
E
I
K
P
L
A
-
D
E
D
Q
Q
L
A
R
E
R
L
L
-
N
-
I
-
K
G
I
G
M
Q
E
A
S
H
F
L
R
N
V
G
Y
--
F
------
D
-
L
A
I
I
D
R
H
I
I
D
F
M
R
R
I
-
G
A
I
-
G
--
E
--------
T
N
V
K
Q
L
S
K
S
L
Y
I
S
F
E
N
I
--
L
K
S
I
A
S
N
L
N
M
S
V
G
I
L
D
L
F
I
W
Y
K
E
T
N
T
I
V
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
73.94
15%
-70
- C3 -
1KG2
6
MUTY_ECOLI
A:
[6-195]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
F
S
A
Q
V
L
D
W
Y
D
K
Y
G
R
K
T
--------
L
----
P
W
Q
I
---------
D
K
T
-
P
Y
K
V
W
L
S
E
V
M
L
Q
Q
T
Q
-----
V
---
A
T
V
I
P
Y
F
E
R
F
M
A
--
R
F
P
-------------------------------
T
--
V
T
D
L
A
N
A
P
L
D
E
V
L
H
L
W
---------
T
--
G
---------
L
G
--
Y
Y
-
A
R
A
R
N
L
H
K
A
A
Q
Q
V
--
A
----
T
-----
L
H
G
G
---------
K
F
P
E
T
F
E
E
V
A
-
A
-
L
-
P
G
V
G
R
S
T
A
G
A
I
L
S
L
S
L
G
--
K
------
H
-
F
P
I
L
D
G
N
V
K
R
V
L
A
R
C
-
Y
A
V
-
S
GW
P
--------
G
K
K
E
V
E
N
K
L
W
S
L
S
E
Q
V
T
--
P
A
------------
V
G
V
E
R
F
N
Q
A
M
M
D
L
G
A
M
I
C
T
R
S
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
73.05
25%
-90
- C3 -
3FHG
12
OGG1_SULSO
A:
[24-157]
------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
N
N
L
-
S
N
E
E
V
-------
W
----------------------
F
R
E
L
T
L
C
L
L
T
A
N
S
S
-----
F
---
I
S
A
Y
Q
A
L
N
C
L
G
Q
--
K
I
Y
Y
A
---
N
-------
E
------
E
E
------
I
--
R
N
I
L
K
S
C
K
Y
---------------------------------
R
--
F
Y
N
L
K
A
K
Y
I
I
M
A
R
E
K
V
--
Y
GR
L
K
E
-----
E
I
K
P
----
L
A
-
D
E
D
Q
Q
L
A
R
E
R
L
L
-
N
-
I
-
K
G
I
G
M
Q
E
A
S
H
F
L
R
N
V
G
Y
--
F
------
D
-
L
A
I
I
D
R
H
I
I
D
F
M
R
R
I
-
G
A
I
-
G
--
E
--------
T
N
V
K
Q
L
S
K
S
L
Y
I
S
F
E
N
I
--
L
K
S
I
A
S
N
L
N
M
S
V
G
I
L
D
L
F
I
W
Y
K
E
T
N
T
I
V
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
Fugue
72.67
16%
-69
- C3 -
1RRQ
4
?
A:
[12-362]
-------------------------------------------------------------------------------------------------------------------------------------------------------
P
A
R
E
F
Q
R
D
L
L
D
W
F
A
R
-
E
R
R
D
L
-------
P
----
W
R
-
K
---------
D
R
D
-
P
Y
K
V
W
V
S
E
V
M
L
Q
Q
T
R
-----
V
---
E
T
V
I
P
Y
F
E
Q
F
I
D
--
R
F
P
-------------------------------
T
--
L
E
A
L
A
D
A
D
E
D
E
V
L
K
A
W
---------
E
--
G
---------
L
G
--
Y
Y
-
S
R
V
R
N
L
H
A
A
V
K
E
V
--
K
----
T
-----
R
Y
G
G
---------
K
V
P
D
D
P
D
E
F
S
-
R
-
L
-
K
G
V
G
P
Y
T
V
G
A
V
L
S
L
A
Y
G
--
V
------
P
-
E
P
A
V
N
G
N
V
M
R
V
L
S
R
L
F
L
V
T
-
D
--
D
I-------
A
K
C
S
T
R
K
R
F
E
Q
I
V
R
E
I
M
AY
E
N
P
G
A
F
N
E
A
L
I
E
L
G
A
L
V
C
T
P
R
R
P
S
C
L
L
C
P
V
Q
A
Y
C
Q
A
F
A
E
GVAEELPVKMV
K
Q
V
P
L
A
V
A
V
L
A
D
DE
G
R
V
L
I
R
K
R
D
STGLLAN
L
W
E
F
PSCETDGADG
K
E
K
L
E
Q
M
VGL
Q
V
E
L
T
E
PI
V
S
F
E
H
A
F
SHLVWQ
L
T
V
F
P
G
R
L
V
H
G
G
P
V
E
E
P
Y
R
L
A
P
EDELKA
Y
A
F
P
V
S
H
Q
R
V
W
R
E
Y
K
E
W
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
HHSearch
72.52
17%
-48
- C3 -
3S6I
3
MAG1_SCHPO
A:
[46-221]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
---------
K
K
E
-
P
Y
E
E
L
I
R
A
V
A
S
Q
Q
L
H
-----
S
---
K
A
A
N
A
I
F
N
R
F
K
S
--
I
S
N
N
------------
G
------
Q
F
------
P
--
T
--
P
E
E
I
R
D
M
D
F
E
I
M
-------------
R
--
A
---------
C
G
--
F
S
A
R
K
I
D
S
L
K
S
I
A
E
A
T
--
I
----
S
-----
G
L
I
P
T
K
E
E
A
E
-
R
L
S
N
E
E
L
I
E
R
L
T
-
Q
-
I
-
K
G
I
G
R
W
T
V
E
M
L
L
I
F
S
L
N
--
R
------
D
D
V
M
P
A
D
D
L
S
I
R
N
G
Y
R
Y
-
L
H
R
L
P
KI
P
--------
T
K
M
Y
V
L
K
H
S
E
----
I
C
A
--
P
F
------------
R
T
A
A
A
W
Y
L
W
K
T
S
K
L
A
D
Y
T
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
71.99
21%
-93
- C3 -
4UNF
4
?
A:
[51-184]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
---------
R
R
D
-
P
M
H
E
L
I
S
T
I
L
S
Q
R
T
T
-----
H
A
D
E
E
A
A
Y
Q
E
L
R
T
L
G
D
W
D
A
I
T
L
A
---
P
-------
T
------
D
A
------
V
-----------------
A
H
A
I
---------
R
--
R
---------
S
N
--
Y
P
E
S
K
A
P
R
I
Q
E
T
L
R
R
I
--
K
----
A
APGGY
D
L
D
F
----
L
R
-
D
L
P
V
K
D
A
L
K
W
L
T
-
D
-
L
-
P
G
V
G
V
K
T
A
S
L
V
L
L
F
N
Y
A
--
R
------
P
-
V
F
P
V
D
T
H
V
H
R
V
S
T
R
V
-
G
V
I
-
P
--
R
--------
M
G
E
Q
A
A
H
R
A
L
L
A
L
L
P
P
D
--
P
P
Y
L
Y
E
L
H
I
N
F
L
S
H
G
R
Q
V
C
T
W
T
R
P
K
C
G
K
C
I
L
R
E
R
C
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
69.48
21%
-63
- C3 -
4EJY
3
?
A:
[129-274]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
T
L
V
S
F
I
V
S
Q
N
N
R
-----
I
---
P
Q
I
K
K
V
I
E
N
L
A
T
--
S
F
--------------
G
------
N
P
------
I
--
E
--
Y
K
G
K
I
Y
Y
T
F
P
K
P
E
E
L
V
MYD
V
E
T
I
A
K
T
--
R
---------
C
G
--
F
---
R
A
K
Y
I
F
D
A
A
S
K
V
--
F
----
S
GEI--
N
L
L
K
----
L
H
-
E
Y
S
T
S
E
I
R
D
I
L
M
-
T
-
I
-
N
G
V
G
P
K
V
A
D
C
V
I
L
Y
S
I
G
--
R
YD
T
F
P
T
D
-
V
W
I
K
R
I
V
E
H
L
Y
L
K
R
E
-
G
T
P
-
V
--
E
--------
I
Q
L
F
A
I
D
K
F
G
D
L
S
G
F
A
Q
--
Q
Y
L
F
Y
Y
G
R
E
M
G
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
69.18
17%
-78
- C3 -
1NGN
-
MBD4_MOUSE
A:
[411-554]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
W
T
P
P
RSPFNL
V
Q
----
E
I
-
L
---------
F
H
D
-
P
W
K
L
L
I
A
T
I
F
L
N
R
T
S
-----
G
---
K
M
A
I
P
V
L
W
E
F
L
E
--
K
Y
P
-------------------------------
S
--
A
E
V
A
R
A
A
D
W
R
D
V
S
E
L
L
---------
K
--
P
---------
L
G
--
L
Y
D
L
R
A
K
T
I
I
K
F
S
D
E
Y
--
L
----
T
-----
K
----------------
Q
W
R
Y
P
I
-
E
-
L
-
H
G
I
G
K
Y
G
N
D
S
Y
R
I
F
C
V
N
EW
K
------
Q
-
V
H
P
E
D
H
K
L
N
K
Y
H
D
W
L
-
W
E
N
-
H
--
E
--------
K
L
S
L
S
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
68.80
21%
-60
- C3 -
4EJZ
2
?
A:
[129-274]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
W
E
T
L
V
S
F
I
V
S
Q
N
N
R
-----
I
---
P
Q
I
K
K
V
I
E
N
L
A
T
--
S
F
--------------
G
------
N
P
------
I
--
E
--
Y
K
G
K
I
Y
Y
T
F
P
K
P
E
E
L
V
MYD
V
E
T
I
A
K
T
--
R
---------
C
G
--
F
---
R
A
K
Y
I
F
D
A
A
S
K
V
--
F
----
S
GEI--
N
L
L
K
----
L
H
-
E
Y
S
T
S
E
I
R
D
I
L
M
-
T
-
I
-
N
G
V
G
P
K
V
A
D
C
V
I
L
Y
S
I
G
--
R
YD
T
F
P
T
D
-
V
W
I
K
R
I
V
E
H
L
Y
L
K
R
E
-
G
T
P
-
V
--
E
--------
I
Q
L
F
A
I
D
K
F
G
D
L
S
G
F
A
Q
--
Q
Y
L
F
Y
Y
G
R
E
M
G
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
HHSearch
68.40
17%
-67
* C3 *
3I0W
7
?
A:
[112-266]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
Q
D
-
P
F
E
I
L
L
S
F
I
I
S
A
N
N
R
-----
I
---
P
M
I
K
K
C
I
N
N
I
S
E
--
K
A
G
K
K
---
L
E
Y
KG
K
I
Y
Y
------
A
F
------
P
--
T
--
V
D
K
L
H
E
F
T
E
K
D
F
E
---------------
E
---------
C
T
--
A
-
G
F
R
A
K
Y
L
K
D
T
V
D
R
I
--
Y
----
N
-----
G
E
L
N
L
E
Y
-
I
K
-
S
L
N
D
N
E
C
H
E
E
L
K
-
K
-
F
-
M
G
V
G
P
Q
V
A
D
C
I
M
L
F
S
M
Q
--
K
Y-----
S
-
A
F
P
V
D
T
W
V
K
K
A
M
M
S
L
-
Y
V
A
-
P
D-
V
--------
S
L
K
K
I
R
D
F
G
R
E
K
F
G
S
L
S
--
G
F
A
Q
Q
Y
L
F
Y
Y
A
R
E
N
N
I
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33
HHSearch
67.55
18%
-45
- C3 -
1MPG
1
3MG2_ECOLI
A:
[110-275]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
V
D
-
A
F
E
Q
G
V
R
A
I
L
G
Q
L
V
S
-----
V
---
A
M
A
A
K
L
T
A
R
V
A
Q
--
L
Y
G
E
R
---
L
-------
D
DFPEYI
C
F
------
P
--
T
--
P
Q
R
L
A
A
A
D
P
Q
A
L
-------------
K
--
A
---------
L
G
--
M
P
L
K
R
A
E
A
L
I
H
L
A
N
A
A
--
L
----
E
-----
G
T
L
P
----
M
T
I
P
G
D
V
E
Q
A
M
K
T
L
Q
-
T
-
F
-
P
G
I
G
R
W
T
A
N
Y
F
A
L
R
G
W
Q
--
A
K-----
D
-
V
F
L
P
D
D
Y
L
I
K
--
Q
R
F
-
P
G
-----
M
--------
T
P
A
Q
I
R
R
Y
A
E
----
R
W
K
--
P
W
------------
R
S
Y
A
L
L
H
I
W
Y
T
E
G
W
Q
P
D
E
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
67.30
26%
-87
- C3 -
3KNT
3
OGG1_METJA
A:
[19-149]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
I
D
K
R
I
Q
E
F
K
S
F
-
K
N
K
S
N
-------
E
----
E
W
----------------
F
K
E
L
C
F
C
I
L
T
A
N
F
T
-----
A
---
E
G
G
I
R
I
Q
K
E
I
G
D
--
G
F
L
T
L
---
P
-------
R
------
E
E
------
L
E
E
K
--
L
K
N
L
G
H
R
F
Y
R
K
R
A
E
-----------------------------
Y
I
V
L
A
R
R
F
----
K
N
I
--
K
----
D
-----
I
V
E
S
----
F
E
-
N
--
E
K
V
A
R
E
F
L
V
-
R
-
N
I
K
G
I
G
Y
Q
E
A
S
H
F
L
R
N
V
G
Y
--
D
------
D
-
V
A
I
I
D
R
H
I
L
R
E
L
Y
E
N
-
N
Y
I
-
D
--
E
--------
I
P
K
T
L
S
R
R
K
Y
L
E
I
E
N
I
L
--
R
D
I
G
E
E
V
N
L
K
L
S
E
L
D
L
Y
I
W
Y
L
R
T
G
K
V
L
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52
Fugue
66.52
18%
-35
- C1 -
3WAJ
2
?
A:
[15-868]
SV
L
V
I
A
A
L
I
S
V
K
L
R
ILNP
W
N
S
V
F
TWTVRLGGN
D
P
W
Y
Y
Y
R
L
I
E
N
T
I
H
N
FPHRIWFDPFTYYP
Y
G
S
Y
T
HFG
P
F
L
V
Y
L
G
S
I
A
G
I
I
F
SATSG
E
S
L
R
A
V
L
A
F
I
P
A
I
G
G
V
L
A
I
L
P
V
Y
L
L
T
R
E
V
FD
K
R
A
A
V
I
A
A
F
L
I
A
I
VPG
Q
F
L
Q
R
S
ILGFNDH
H
I
W
E
A
F
W
Q
V
S
A
L
G
T
F
L
L
A
-
Y
N
R
---------
W
KGHD
L
T
-
A
---------
R
Q
M
-
A
Y
P
V
I
A
G
I
T
I
G
L
Y
V
L
S
WGAG
F
---
I
I
A
P
I
I
L
A
F
M
F
F
--
A
F
V
L
A
GFV
N
-------
A
------
D
R
------
K
--
N
--
L
S
L
V
A
V
V
T
F
A
V
S
A
L
I
Y
---------
L
--
P
FAFNYPGFS
T
I
--
F
Y
S
P
F
Q
L
L
V
L
L
G
S
A
V
I
--
A
----
A
-----
A
F
Y
Q
----
I
E
-
K
W
N
D
V
----
G
F
F
-
E
-
R
-
V
G
L
G
R
K
G
M
P
L
----------------
A
-
V
I
V
L
T
A
L
I
M
G
L
F
F
V
L
-
T
N
A
-
V
--
L
--------
H
F
G
A
L
F
F
F
G
M
A
G
I
L
Y
S
A
--
Y
R
F
L
K
R
R
----
S
F
P
E
M
A
L
L
I
W
A
I
A
M
F
I
A
L
W
G
Q
N
R
F
A
YYF
A
A
V
S
A
V
Y
S
A
L
A
L
S
V
V
F
D
K
L
HFRVA
F
A
L
L
I
A
L
A
A
IY
P
T
Y
I
L
A
D
A
Q
S
S
Y
AGGPN
K
Q
W
Y
D
A
L
T
W
M
R
E
N
TPD
G
E
K
Y
D
E
Y
Y
L
QLYPTPQSNKEPFSYPFE
T
Y
G
V
I
S
W
WDY
G
H
W
I
E
A
V
AHRMPIANPFQAGIGNKYNNVPG
A
S
S
F
F
T
AEN
E
S
Y
A
E
F
V
A
E
K
L
NVK
Y
V
V
S
D
IEMETGK
Y
Y
A
M
A
V
W
A
E
GD
L
P
L
A
E
KY
Y
G
G
Y
F
Y
Y
S
PTG
T
F
G
Y
A
NSQWDIPLNSIIIP
L
R
I
P
S
E
L
Y
Y
S
T
M
E
A
K
L
HLFDGSGLSHYRMIYESDYP
A
E
W
K
S
Y
S
S
QVNLNN
E
S
Q
V
L
Q
T
A
L
Y
E
A
V
M
R
A
RYGVSPT
M
G
T
Q
E
V
L
Y
K
Y
A
Y
T
Q
LYEKKM
G
I
P
V
K
IAPSGY
V
K
I
F
E
R
V
K
G
A
V
V
T
G
K
V
S
A
NVT
E
V
S
V
N
A
T
I
K
T
NQN
R
T
F
E
Y
W
Q
T
V
E
V
K
NG
T
Y
T
V
V
L
PYSHNSDYPVKPIT
P
Y
H
I
K
A
GN
V
V
K
E
I
T
I
Y
E
S
Q
V
Q
N
G
E
I
I
Q
L
D
L
50
Fugue
64.91
16%
-64
- C3 -
1MPG
1
3MG2_ECOLI
A:
[100-282]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
R
P
G
-------
L
----
R
L
-
P
---------
G
C
V
D
A
F
E
Q
G
V
R
A
I
L
G
Q
L
V
S
-----
V
---
A
M
A
A
K
L
T
A
R
V
A
Q
--
L
Y
G
E
R
---
L
-------
D
------
D
F
PEYICF
P
--
T
--
P
Q
R
L
A
A
A
D
P
Q
A
L
K
A
------------------------
L
G
--
M
P
L
K
R
A
E
A
L
I
H
L
A
N
A
A
--
L
----
E
G----
T
L
P
M
----
T
I
-
P
G
D
V
E
Q
A
M
K
T
L
Q
-
T
-
F
-
P
G
I
G
R
W
T
A
N
Y
F
A
L
R
G
------------------------
W
Q
A
K
-
D
V
F
-
L
--
P
--------
D
D
Y
L
I
K
Q
R
F
P
G
M
T
P
A
Q
I
--
R
R
Y
A
E
R
W
K
P
W
R
S
Y
A
L
L
H
I
W
Y
T
E
G
W
Q
P
D
E
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------