Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling

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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_0653: (2015-12-17 )
MDILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSVYLNDVDLAKYPLHKRSNLGIGYLPQESSIFKELSVEENLALAGESTFKNSKESEEKMESLLDAFNIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQRIIESLIGLNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEIYENALVRKYYLGENFKV

Atome Classification :

	(21 SA)									.........10........20........30........40........50........60........70........80........90........-100-----.....---------.----.-------110.-.--.....120..-.....130.......140.......150.......160.......170.......180..-.....190.......200.......210.......220......----.230.......240
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MDILKAEHLNKQIKKTKIVSDVSLEVKSGEVVGLLGPNGAGKTTTFYMICGLLEPSGGSVYLNDVDLAKYPLHKRSNLGIGYLPQESSIFKELSVEENL-ALA-----GESTF---------K----N-------SKES-E--EKMESLLDAF-NIQAIRERKGMSLSGGERRRVEIARALMKNPKFVLLDEPFAGVDPIAVIDIQRIIESLIG-LNIGVLITDHNVRETLSVCHRAYVIKSGTLLASGNANEIYENAL----VRKYYLGENFKV
1	PsiBlast_PDB	99.41	55%	-118	- C1 -	4WBS		?	A:[40-282]	---LVVRNLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKSISLLPIHKRASLGLSYLPQEASVFRKLSVEENI-RAVLELQVGDDGK---------R----L-------SKDAIA--SRTEALLDEL-QISHLRENPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLKQ-RNIGVLITDHNVRETLGICDHAYIISDGSVLAAGAPGDIIENES----VRRVYLGEHFRM
21	PsiBlast_CBE	97.17	55%	-116	- C1 -	4WBS		?	B:[40-282]	---LVVRNLKKRYGSRTVVKDVSLDVKSGEVVGLLGPNGAGKTTSFYMIVGLVPLDAGEIDLDGKSISLLPIHKRASLGLSYLPQEASVFRKLSVEENI-RAVLELQVG--GK---------R----L-------SKDAIA--SRTEALLDEL-QISHLRENPALSLSGGERRRVEIARALATNPSFILLDEPFAGVDPIAVLEIQKIVKFLKQ-RNIGVLITDHNVRETLGICDHAYIISDGSVLAAGAPGDIIENES----VRRVYLGEHFRM
4	PsiBlast_PDB	93.20	55%	-108	- C1 -	4P33		LPTB_ECOLI	A:[3-235]	---LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVL-----QIRDD---------L----S-------AEQR-E--DRANELMEEF-HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEH----VKRVYLG-----
24	PsiBlast_CBE	92.91	55%	-108	- C1 -	4P33		LPTB_ECOLI	B:[3-235]	---LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVL-----QIRDD---------L----S-------AEQR-E--DRANELMEEF-HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEH----VKRVYLG-----
3	PsiBlast_PDB	92.42	55%	-106	- C1 -	4P32		LPTB_ECOLI	A:[3-234]	---LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVL-----QIRDD---------L----S-------AEQR-E--DRANELMEEF-HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEH----VKRVYL------
2	PsiBlast_PDB	91.44	55%	-102	- C1 -	4QC2		?	A:[2-236]	-ATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVL-----QIRDD---------L----S-------AEQR-E--DRANELMEEF-HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEH----VKRVYLG-----
22	PsiBlast_CBE	91.40	55%	-108	- C1 -	4QC2		?	B:[2-236]	-ATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVL-----QIRDD---------L----S-------AEQR-E--DRANELMEEF-HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEH----VKRVYLG-----
23	PsiBlast_CBE	90.27	55%	-106	- C1 -	4P32		LPTB_ECOLI	B:[3-230]	---LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVL-----QIRDD---------L----S-------AEQR-E--DRANELMEEF-HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEH----VK----------
6	PsiBlast_PDB	76.97	32%	-109	- C1 -	1JI0		?	A:[6-238]	--VLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENL-M-M-----GAYNR---------K----D-------KEGI-K--RDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQ-EGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEM----VRKAYLGVA---
68	HHSearch	76.35	32%	-111	- C1 -	1JI0		?	A:[5-237]	-IVLEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENL-MMG-----AYNRK---------D------------KEGI-K--RDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQ-EGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEM----VRKAYLGVA---
26	PsiBlast_CBE	76.12	33%	-102	- C1 -	1G9X		LIVG_METJA	B:[5-256]	MEILRTENIVKYFGEFKALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENL-LIGEINP-GESPL---------N----SLFYKKWIPKEE-EMVEKAFKILEFL-KLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-KGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIG-----
10	PsiBlast_PDB	75.39	33%	-100	- C1 -	1G6H		LIVG_METJA	A:[5-257]	MEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENL-LIGEICP-GESPL---------N----SLFYKKWIPKEE-EMVEKAFKILEFL-KLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-KGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIGE----
77	HHSearch	74.51	34%	-97	- C1 -	1G6H		LIVG_METJA	A:[5-243]	MEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENL-LIG-----EICPGESPLNSLFYKKWIPK-------EEEM-V--EKAFKILEFL-KLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-KGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVL----SDPKVVEIYIGE
25	PsiBlast_CBE	73.44	33%	-91	- C1 -	1G9X		LIVG_METJA	C:[5-256]	MEILRTENIVKYFGEFKALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENL-LIGEINP-GESPL---------N----SLFYKKWIPKEE-EMVEKAFKILEFL-KLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-KGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIG-----
12	PsiBlast_PDB	73.26	33%	-92	- C1 -	1GAJ		LIVG_METJA	A:[5-257]	MEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENL-LIGEINP-GESPL---------N----SLFYKKWIPKEE-EMVEKAFKILEFL-KLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDQPIAGVAPGLAHDIFNHVLELKA-KGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIGE----
11	PsiBlast_PDB	72.17	33%	-95	- C1 -	1G9X		LIVG_METJA	A:[5-256]	MEILRTENIVKYFGEFKALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENL-LIGEINP-GESPL---------N----SLFYKKWIPKEE-EMVEKAFKILEFL-KLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKA-KGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIG-----
63	HHSearch	70.75	33%	-105	- C1 -	2YYZ		?	A:[2-225]	-PSIRVVNLKKYFGKVKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPP---KYREVGMVFQNYALYPHMTVFENI-AFP-----LRARR---------I----S-------KDEV-E--KRVVEIARKL-LIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPK----NMFVASFIGNPP
60	HHSearch	70.67	30%	-105	- C1 -	2IT1	-	?	A:[1-225]	MVEIKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPP---KDRNVGLVFQNWALYPHMTVYKNI-AFP-----LELRK---------A----P-------REEI-D--KKVREVAKML-HIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPK----YKFVGGFLGNPP
15	PsiBlast_PDB	70.38	31%	-110	- C1 -	1V43	-	?	A:[13-231]	---VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRN---ISMVFQ------HMTVYENI-AFP-----L--KK---------F----P-------KDEI-D--KRVRWAAELL-QIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPN----SVFVATFIGAPE
8	PsiBlast_PDB	70.22	30%	-105	- C1 -	2IT1	-	?	A:[4-222]	---IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKIYFDEKDVTELPPKDRN---VGLVFQNWALYPHMTVYKNI-AFP-----LELRK---------A----P-------REEI-D--KKVREVAKML-HIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPK----YKFVGGFLGNPP
5	PsiBlast_PDB	59.53	55%	0	- C1 -	4P31		LPTB_ECOLI	A:[3-234]	---LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVL-----QIRDD---------L----S-------AEQR-E--DRANELMEEF-HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEH----VKRVYL------