@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_1079: (2015-12-20 )
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKAGGIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFHEENKSVKEIANNALKRAKEAQFDVLIVDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFMPERIVGRLMGAGDIISLAEKTASVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDLESSLEVKKIKAMVNSMTKKERENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMAKRLTNKKGISDLMNLMSQAKNQTPPKMR

Atome Classification :

(47 SA) .........10.....--...------------20-.........30........40........50..-----.-----.----.-----...-----60...-----.--....-70-----...--......80..----..--.---..---.90----...-------......100.......110.......120.-.-.....130.......140.......150.--.-.-.--..--.-160.......170.......180.......190--.......----200--.------.------.------....210.......220.......230.-......240.......250.......260.......270.......280.......290.......300-.....-..--310...-.-...-320.......330.......340.......350......-.360...-....370.......380.....-----..390.......400.......410.......420.......---430.......440--........
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MFQALSDGFKNALNKI--RFQ------------D--DEKALDRALDELKKTLLKNDVHHKVARELLKKV-----E-----S----Q-----TKA-----GGIGK-----Q--QFLD-A------LEK--SLLEILSAKG----SS--G---FT---FA-----QTP-------PTVVLMAGLQGSGKTTTTAKLAHYLKTKNK-K-VLLCACDLQRLAAVEQLKVLGEQVGVEVF--H-E-E--NK--S-VKEIANNALKRAKEAQFDVLIVDSAGRLAIDKE--LMQELKE----VKE--V------L------N------PHEVLYVADALSGQDGVKSANTFNEEIG-VSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFMPERIVGRLMGAGDIISLAEKTASV-LNPNE-AK--DLSKKL-K-KGQ-FTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDT-DLESSLE-VKKIKAMVNSMTKKERENPEIL-----NGSRRKRIALGSGLEVSEINRIIKRFDQASKMAKRLTNKKGI---SDLMNLMSQAK----NQTPPKMR
21 PsiBlast_CBE 92.2941% -89 - C5 -2XXA SRP54_ECOLI C:[7-421] ------DRLSRTLRNISGRGR------------L--TEDNVKDTLREVRMALLEADVALPVVREFINRV-----K-----E----K-----AVG-----HEVNKSLTPGQ--EFVK-I------VRN--ELVAAMGEEN----QT------LN---LA-----AQP-------PAVVLMAGLQGAGKTTSVGKLGKFLREKHK-KKVLVVSADVYRPAAIKQLETLAEQVGVDFF--P-S-DVGQK--P-V-DIVNAALKEAKLKFYDVLLVDTAGRLHVDEA--MMDEIKQ----VHA--S------I------N------PVETLFVVDAMTGQDAANTAKAFNEALP-LTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESK-VDRAQ-AE--KLASKL-K-KGDGFDLNDFLEQLRQMKNMGGMASLMG------------------DDKVL-V-RMEAIINSMTMKERAKPEII-----KGSRKRRIAAGSGMQVQDVNRLLKQFDDMQRMMKKMKK------------------------------
1 PsiBlast_PDB 90.8041% -86 - C5 -2XXA SRP54_ECOLI A:[4-421] ---NLTDRLSRTLRNISGRGR------------L--TEDNVKDTLREVRMALLEADVALPVVREFINRV-----K-----E----K-----AVG-----HEVNKSLTPGQ--EFVK-I------VRN--ELVAAMGEEN----QT------LN---LA-----AQP-------PAVVLMAGLQGAGKTTSVGKLGKFLREKHK-KKVLVVSADVYRPAAIKQLETLAEQVGVDFF--P-S-DVGQK--P-V-DIVNAALKEAKLKFYDVLLVDTAGRLHVDEA--MMDEIKQ----VHA--S------I------N------PVETLFVVDAMTGQDAANTAKAFNEALP-LTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESK-VDRAQ-AE--KLASKL-K-KGDGFDLNDFLEQLRQMKNMGGMASLMGK-----------------DDKVL-V-RMEAIINSMTMKERAKPEII-----KGSRKRRIAAGSGMQVQDVNRLLKQFDDMQRMMKKMKK------------------------------
106 HHSearch 89.6333% -81 - C5 -3DM5 SRP54_PYRFU A:[2-435] VLDNLGKALANTLKKI--ARA------------SSVDEALIKELVRDIQRALIQADVNVRLVLQLTREI-----Q-----R----R-----ALEEKPPAGISKK-----E--HIIK-I------VYE--ELTKFLGT-E----AK--P---IE---IK------EK-------PTILLMVGIQGSGKTTTVAKLARYFQK-RGYK-VGVVCSDTWRPGAYHQLRQLLDRYHIEVF--G-N-P--QEK-D-AIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKA--LIEEMKQ----ISN--V------I------H------PHEVILVIDGTIGQQAYNQALAFKEATP-IGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKEL-EKEVEIKE--EDIERF-L-RGK-FTLKDMYAQLEAMRKMGP---------------------ISIGE-ER-LKKFKVIMDSMTEEELLNPEII-----NYSRIKRIARGSGTSTKDVKELLDQYRQMKKLFKSMNKRQLS--------------------------
105 HHSearch 88.8040% -85 - C5 -2FFH SRP54_THEAQ A:[1-418] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERV-----R-----E----E-----ALGKQVLESLTPA-----E--VILA-T------VYE--ALKEALGG------EA--R---L----PV-----LKD-------RNLWFLVGLQGSGKTTTAAKLALYYKG-KGRR-PLLVAADTQRPAAREQLRLLGEKVGVPVL--E-V-M--DGE-S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRAA----------------------E-LSLEDFLKQMQNLKRLGPFSEILGLLPGVPQG---LK----VDE-KA-IKRLEAIVLSMTPEERKDPRIL-----NGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK------------------------------
6 PsiBlast_PDB 88.2034% -78 - C5 -3DM5 SRP54_PYRFU A:[6-435] ----LGKALANTLKKI--ARA------------SSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRALE-----E----K-----PPA-----GISKK-----E--HIIK-I------VYE--ELTKFLGTEA----KP-------I---EI-----KEK-------PTILLMVGIQGSGKTTTVAKLARYFQKRGY-K-VGVVCSDTWRPGAYHQLRQLLDRYHIEVFG-N-P-Q--EK--D-AIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKA--LIEEMKQ----ISN--V------I------H------PHEVILVIDGTIGQQAYNQALAFKEATP-IGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKEL-EKEVE-IKEEDIERFL---RGK-FTLKDMYAQLEAMRKMGP-----------------------ISIGEERLKKFKVIMDSMTEEELLNPEII-----NYSRIKRIARGSGTSTKDVKELLDQYRQMKKLFKSM-NKRQL---S----------------------
2 PsiBlast_PDB 86.9140% -75 - C5 -2FFH SRP54_THEAQ A:[1-418] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRAA---------------EL--------SLEDFLKQMQNLKRLGPFSEILGLLPG---VPQGLK-V-DEKA----IKRLEAIVLSMTPEERKDPRIL-----NGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK------------------------------
23 PsiBlast_CBE 86.6140% -74 - C5 -2FFH SRP54_THEAQ B:[1-418] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRAA---------------EL--------SLEDFLKQMQNLKRLGPFSEILGLLPG---VPQGLK-V-DEKA----IKRLEAIVLSMTPEERKDPRIL-----NGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK------------------------------
103 HHSearch 86.4141% -26 - C- -2XXA SRP54_ECOLI A:[4-432] ---NLTDRLSRTLRNI--SGR------------GRLTEDNVKDTLREVRMALLEADVALPVVREFINRV-----K-----E----K-----AVGHEVNKSLTPG-----Q--EFVK-I------VRN--ELVAAMGE-E----NQ--T---LN---LA-----AQP-------PAVVLMAGLQGAGKTTSVGKLGKFLREKHKKK-VLVVSADVYRPAAIKQLETLAEQVGVDFF--P-S-D--VGQ-K-PVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEA--MMDEIKQ----VHA--S------I------N------PVETLFVVDAMTGQDAANTAKAFNEALP-LTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESK-VDRAQ-AE--KLASKLKK-GDG-FDLNDFLEQLRQMKNMGGMASLMGK-----------------DD-KV-LVRMEAIINSMTMKERAKPEII-----KGSRKRRIAAGSGMQVQDVNRLLKQFDDMQRMMKKMKK------------------------------
24 PsiBlast_CBE 86.2534% -79 - C5 -3DM5 SRP54_PYRFU B:[6-434] ----LGKALANTLKKI--ARA------------SSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRALE-----E----K-----PPA-----GISKK-----E--HIIK-I------VYE--ELTKFLGTEA----KP-------I---EI-----KEK-------PTILLMVGIQGSGKTTTVAKLARYFQKRGY-K-VGVVCSDTWRPGAYHQLRQLLDRYHIEVFG-N-P-Q--EK--D-AIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKA--LIE-MKQ----ISN--V------I------H------PHEVILVIDGTIGQQAYNQALAFKEATP-IGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKEL-EKEVE-IKEEDIERFL---RGK-FTLKDMYAQLEAMRKMGP------------------------SIGEERLKKFKVIMDSMTEEELLNPEII-----NYSRIKRIARGSGTSTKDVKELLDQYRQMKKLFKSM-NKRQL--------------------------
22 PsiBlast_CBE 85.7340% -72 - C5 -2FFH SRP54_THEAQ C:[1-418] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRAA---------------EL--------SLEDFLKQMQNLKRLGPFSEILGLLPG---VPQGLK-V-DEKA----IKRLEAIVLSMTPEERKDPRIL-----NGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK------------------------------
5 PsiBlast_PDB 84.6634% -78 - C5 -3NDB SRP54_METJA B:[4-417] ----LGENLNKALNKL--KAA------------AFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEI-----ERRALEE----K-----TPK-----GLSKK-----E--HIIK-I------VYE--ELVKLLGEEA----KK------LE---LN-----PKK-------QNVILLVGIQGSGKTTTAAKLARYIQKRGL-K-PALIAADTYRPAAYEQLKQLAEKIHVPIY--G-D-ETRTK--S-PVDIVKEGMEKFKKA--DVLIIDTAGRHKEEKG--LLEEMKQ----IKE--I------T------N------PDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDLESLLEKAEDM-VDEKT-EE--SID-AI-M-RGK-FTLNELMTQLEAIENM--------------------------LTEAK-IKKYKVIISSMTKEERENPKII-----KASRIRRIARGSGTTENDVREVLRYYETTKNAIDKLRKGLAL---ALLLLLLALAL------------
25 PsiBlast_CBE 82.5240% -92 - C5 -4C7O SRP54_ECOLI C:[2-298] -FDNLTDRLSRTLRNISGRGR------------L--TEDNVKDTLREVRMALLEADVALPVVREFINRV-----K-----E----K-----AVG-----HEVNKSLTPGQ--EFVK-I------VRN--ELVAAMGEEN----QT------LN---LA-----AQP-------PAVVLMAGLQGAGKTTSVGKLGKFLREKHK-KKVLVVSADVYRPAAIKQLETLAEQVGVDFF--P-S-DV-GQ--K-PVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEA--MMDEIKQ----VHA--S------I------N------PVETLFVVDAMTGQDAANTAKAFNEALP-LTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 82.3234% -67 - C5 -2V3C - SRP54_METJA C:[5-418] ----LGENLNKALNKL--KAA------------AFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEI-----ERRALEE----K-----TPK-----GLSKK-----E--HIIK-I------VYE--ELVKLLGEEA----KK------LE---LN-----PKK-------QNVILLVGIQGSGKTTTAAKLARYIQKRGL-K-PALIAADTYRPAAYEQLKQLAEKIHVPIY--G-D-ETRTK--S-PVDIVKEGMEKFKKA--DVLIIDTAGRHKEEKG--LLEEMKQ----IKE--I------T------N------PDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDLESLLEKAEDM-VDEKT-EE--SID-AI-M-RGK-FTLNELMTQLEAIENM--------------------------LTEAK-IKKYKVIISSMTKEERENPKII-----KASRIRRIARGSGTTENDVREVLRYYETTKNAIDKLH-------------------------------
9 PsiBlast_PDB 81.6940% -96 - C5 -4C7O SRP54_ECOLI A:[4-296] ---NLTDRLSRTLRNISGRGR------------L--TEDNVKDTLREVRMALLEADVALPVVREFINRV-----K-----E----K-----AVG-----HEVNKSLTPGQ--EFVK-I------VRN--ELVAAMGEEN----QT------LN---LA-----AQP-------PAVVLMAGLQGAGKTTSVGKLGKFLREKHK-KKVLVVSADVYRPAAIKQLETLAEQVGVDFF--P-S-DV-GQ--K-PVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEA--MMDEIKQ----VHA--S------I------N------PVETLFVVDAMTGQDAANTAKAFNEALP-LTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 81.1431% -64 - C5 -2J37 SRP54_CANFA W:[24-465] ------------------------------------NEEVLNAMLKEVCTALLEADVNIKLVKQLRENV-----K-----SAIDLE-----EMA-----SGLNK-----R--KMIQHA------VFK--ELVKLVDP-G----VK--A---WT---PT-----KG---------NVIMFVGLQGSGKTTTCSKLAYYYQRKGW-K-TCLICADTFRAGAFDQLKQNATKARIPFYGSY-T-E--MD--P-VI-IASEGVEKFKNENFEIIIVDTSGRHKQEDS--LFEEMLQ----VAN--A------I------Q------PDNIVYVMDASIGQACEAQAKAFKDKVD-VASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNELKLDDNE-A----LIEKL-K-HGQ-FTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMS-KGN-EQESMAR-LKKLMTIMDSMNDQELDSTDGAKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQMAKLNQQMAKMM
8 PsiBlast_PDB 80.5436% -74 - C5 -1QZX - SRP54_SULSO A:[20-408] -------------------------------------EKAVDEFIKDLQKSLISSDVNVKLVFSLTAKI-----K-----E----R---------------LNK-----E--KPPS-V------LERKEWFISIVYDEL----SK--L---FG---GD-----KEPNVNPTKLPFIIMLVGVQGSGKTTTAGKLAYFYKKRGY-K-VGLVAADVYRPAAYDQLLQLGNQIGVQVY--G-EPN--NQ--N-PIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKE----MYD--V------L------K------PDDVILVIDASIGQKAYDLASRFHQASP-IGSVIITKMDGTAKGGGALSAVVATGATIKFIGTGEKIDELETFNAKRFVSRILGMGDIESILEKVKGL----EE-YD--KIQKKM-ED----LTLRDVYAQIIALRKMGPLSKVLQHIPGLGIMLPTPSED-QLKIGEEKIRRWLAALNSMTYKELENPNII-----DKSRMRRIAEGSGLEVEEVRELLEWYNNMNRLLKMVK-------------------------------
26 PsiBlast_CBE 78.8140% -86 - C5 -2J46 SRP54_THEAQ B:[1-297] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 PsiBlast_CBE 78.7840% -81 - C5 -1O87 SRP54_THEAQ B:[1-295] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
108 HHSearch 78.7634% -44 - C- -2V3C - SRP54_METJA C:[2-428] -MDKLGENLNKALNKL--KAA------------AFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEI-----E-----R----R-----ALEEKTPKGLSKK-----E--HIIK-I------VYE--ELVKLLGE-E----AK--K---LE---LN-----PKK-------QNVILLVGIQGSGKTTTAAKLARYIQK-RGLK-PALIAADTYRPAAYEQLKQLAEKIHVPIY--G-D-E--TRTKS-PVDIVKEGMEKF--KKADVLIIDTAGRHKEEKG--LLEEMKQ----IKE--I------T------N------PDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDLESLLEKAEDM-VDEK--TE--ESIDAI-M-RGK-FTLNELMTQLEAIENM-------------------------LTE-AK-IKKYKVIISSMTKEERENPKII-----KASRIRRIARGSGTTENDVREVLRYYETTKNAIDKLH-------------------------------
32 PsiBlast_CBE 78.4140% -87 - C5 -3NG1 SRP54_THEAQ B:[1-293] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 PsiBlast_CBE 78.3940% -84 - C5 -1JPN SRP54_THEAQ B:[1-295] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 78.2940% -81 - C5 -1JPJ SRP54_THEAQ A:[1-294] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 78.1640% -87 - C5 -3NG1 SRP54_THEAQ A:[1-293] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36 PsiBlast_CBE 77.9340% -85 - C5 -1NG1 SRP54_THEAQ A:[1-293] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 77.7640% -80 - C5 -1OKK SRP54_THEAQ A:[4-293] ---QLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 77.7240% -85 - C5 -1JPN SRP54_THEAQ A:[1-296] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGD----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 77.2940% -85 - C5 -1O87 SRP54_THEAQ A:[1-295] MFQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 77.0940% -77 - C5 -2J7P SRP54_THEAQ A:[3-293] --QQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 PsiBlast_CBE 76.7640% -80 - C5 -2J7P SRP54_THEAQ B:[4-293] ---QLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVARDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
114 HHSearch 76.6935% -91 - C5 -3E70 ? C:[7-324] MFGKLREKLKSFVKRV--EEEVEKEEEEVILTVEI-KEKDVDKALDELEIDLLEADVALEVVDALREKI-----K-----Q----K-----LVGKKVRIG---G-----K--IIEE-A------VKE--AVSEILET------SR--RIDLIEEI-RK-----AEK-------PYVIMFVGFNGSGKTTTIAKLANWLKN-HGFS-VVIAASDTFRAGAIEQLEEHAKRIGVKVI--K-H-S--YGA-D-PAAVAYDAIQHAKARGIDVVLIDTAGRSETNRN--LMDEMKK----IAR--V------T------K------PNLVIFVGDALAGNAIVEQARQFNEAVK-IDGIILTKLDADARGGAALSISYVIDAPILFVGVGQGYDDLRPFEKEWFLERIFG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39 PsiBlast_CBE 76.1439% -82 - C5 -2NG1 SRP54_THEAQ A:[1-292] -FQQLSARLQEAIGRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGM------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 74.6440% -80 - C5 -1RJ9 SRP54_THEAQ B:[14-295] -------------GRL--RGR------------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERV-----R-----E----E-----A---------LGK-----QVLESLT-P------AEV--ILATVYEALK----EA--L---GG---EA-----RLPVLKD---RNLWFLVGLQGSGKTTTAAKLALYYKGKGR-R-PLLVAADTQRPAAREQLRLLGEKVGVPVL--EVM-D--GE--S-PESIRRRVEEKARLEARDLILVDTAGRLQIDEP--LMGELAR----LKE--V------L------G------PDEVLLVLDAMTGQEALSVARAFDEKVG-VTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
123 HHSearch 74.5734% -94 - C5 -1RJ9 FTSY_THEAQ A:[27-303] ---------------------------------------NLEEVLEELEMALLAADVGLSATEEILQEV-----R-----A----S-----GR----------------K--DLKE-A------VKE--KLVGMLEPDERRATLRKLG---FN---PQKPKPVEPK-------GRVVLVVGVNGVGKTTTIAKLGRYYQNLGK-K-VMFCAGDTFRAAGGTQLSEWGKRLSIPVI--Q-G-P--EGT-D-SAALAYDAVQAMKARGYDLLFVDTAGRLHTKHN--LMEELKKVKRAIAKADP------E------E------PKEVWLVLDAVTGQNGLEQAKKFHEAVG-LTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42 PsiBlast_CBE 73.9134% -91 - C5 -3E70 ? C:[49-324] -------------------------------------EKDVDKALDELEIDLLEADVALEVVDALREKI-----K-----Q----KLVGKKVRI-----G---G-----K--IIEE-A------VKE--AVSEILETSR----RI--D---LIEEIRK-----AEK-------PYVIMFVGFNGSGKTTTIAKLANWLKNHGF-S-VVIAASDTFRAGAIEQLEEHAKRIGVKVIK-H-S-Y--GA--D-PAAVAYDAIQHAKARGIDVVLIDTAGRSETNRN--LMDEMKK----IAR--V------T------K------PNLVIFVGDALAGNAIVEQARQFNEAVK-IDGIILTKLDADARGGAALSISYVIDAPILFVGVGQGYDDLRPFEKEWFLERIFG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 PsiBlast_CBE 73.1334% -93 - C5 -3DMD ? B:[49-324] -------------------------------------EKDVDKALDELEIDLLEADVALEVVDALREKI-----K-----Q----KLVGKKVRI-----GTDKG-----K--IIEE-A------VKE--AVSEILETSR----RI--D---LIEEIRK-----AEK-------PYVIMFVGFNGSGKTTTIAKLANWLKNHGF-S-VVIAASDTFRAGAIEQLEEHAKRIGVKVIK-H-S-Y--GA--D-PAAVAYDAIQHAKARGIDVVLIDTAGRSETNRN--LMDEMKK----IAR--V------T------K------PNLVIFVGDALAGNAIVEQARQFNEAVK-IDGIILTKLDADARGGAALSISYVIDAPILFVGVGQGYDDLRPFEKEWFLERIFG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
118 HHSearch 72.6834% -95 - C5 -2YHS FTSY_ECOLI A:[223-495] ---------------------------------------IDDDLFEELEEQLLIADVGVETTRKIITNL-----T-----E----G-----ASRK----QLRDA-----E--ALYG-L------LKE--EMGEILAK------VDE-P---LN---VE-----GKA-------PFVILMVGVNGVGKTTTIGKLARQFEQ-QGKS-VMLAAGDTFRAAAVEQLQVWGQRNNIPVI--A-Q-H--TGA-D-SASVIFDAIQAAKARNIDVLIADTAGRLQNKSH--LMEELKK----IVR--VMKKLDVE------A------PHEVMLTIDASTGQNAVSQAKLFHEAVG-LTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46 PsiBlast_CBE 70.8841%-101 - C5 -1VMA ? B:[80-304] ------------------------------------------------------------------------------------------------------------------LE-S------LKE--IILEILNF------DT--K---LN---VP-----PEP-------PFVIMVVGVNGTGKTTSCGKLAKMFVDEGK-S-VVLAAADTFRAAAIEQLKIWGERVGATVIS-H-S-E--GA--D-PAAVAFDAVAHALARNKDVVIIDTAGRLHTKKN--LMEELRK----VHR--V------V------KKKIPDAPHETLLVIDATTGQNGLVQAKIFKEAVN-VTGIILTKLDGTAKGGITLAIARELGIPIKFIGVGEKAEDLRPFDPEAFVEVLLSE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52 PsiBlast_CBE 67.8637%-103 - C5 -2YHS FTSY_ECOLI A:[255-495] ----------------------------------------------------------------------------------------------------GASR-----K--QLRD-AEALYGLLKE--EMGEIL-AKV----DE--P---LN---VE-----GKA-------PFVILMVGVNGVGKTTTIGKLARQFEQQGK-S-VMLAAGDTFRAAAVEQLQVWGQRNNIPVI--A-Q-H--TG--ADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH--LMEELKK----IVR--V------M------KKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVG-LTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFAR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50 PsiBlast_CBE 67.5938% -94 - C5 -4C7O FTSY_ECOLI D:[36-264] ----------------------------------------------------------------------------------------------------GASR-----K--QLRD-AEALYGLLKE--EMGEIL-AKV----DE--P---LN---VE-----GKA-------PFVILMVGVNGVGKTTTIGKLARQFEQQGK-S-VMLAAGDTFRAAAVEQLQVWGQRNNIPVI--A-Q-H--TG--ADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH--LMEELKK----IVR--V------M------KKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVG-LTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51 PsiBlast_CBE 67.3438% -87 - C5 -4C7O FTSY_ECOLI B:[36-264] ----------------------------------------------------------------------------------------------------GASR-----K--QLRD-AEALYGLLKE--EMGEIL-AKV----DE--P---LN---VE-----GKA-------PFVILMVGVNGVGKTTTIGKLARQFEQQGK-S-VMLAAGDTFRAAAVEQLQVWGQRNNIPVI--A-Q-H--TG--ADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH--LMEELKK----IVR--V------M------KKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVG-LTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
62 PsiBlast_CBE 64.5438% -88 - C5 -2J7P FTSY_THEAQ E:[94-281] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQNLGK-K-VMFCAGDTFRAAGGTQLSEWGKRLSIPVI--QGP-E--GT--D-PAALAYDAVQAMKARGYDLLFVDTAGRLHTKHN--LMEELKK----VKR--A------IAKADPEE------PKEVWLVLDAVTGQNGLEQAKKFHEAVG-LTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
63 PsiBlast_CBE 64.2338% -89 - C5 -2J7P FTSY_THEAQ D:[94-281] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQNLGK-K-VMFCAGDTFRAAGGTQLSEWGKRLSIPVI--QGP-E--GT--D-PAALAYDAVQAMKARGYDLLFVDTAGRLHTKHN--LMEELKK----VKR--A------IAKADPEE------PKEVWLVLDAVTGQNGLEQAKKFHEAVG-LTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
60 PsiBlast_CBE 63.6938% -89 - C5 -1OKK FTSY_THEAQ D:[114-301] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQNLGK-K-VMFCAGDTFRAAGGTQLSEWGKRLSIPVI--QGP-E--GT--D-PAALAYDAVQAMKARGYDLLFVDTAGRLHTKHN--LMEELKK----VKR--A------IAKADPEE------PKEVWLVLDAVTGQNGLEQAKKFHEAVG-LTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
64 PsiBlast_CBE 63.6738%-104 - C5 -2IYL FTSY_THEAQ D:[95-282] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQNLGK-K-VMFCAGDT------TQLSEWGKRLSIPVI--QGP-E--GT--D-PAALAYDAVQAMKARGYDLLFVDTAGRLHTKHN--LMEELKK----VKR--A------IAKADPEE------PKEVWLVLDAVTGQ--LEQAKKFHEAVG-LTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLED------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
61 PsiBlast_CBE 61.6038% -88 - C5 -1RJ9 FTSY_THEAQ A:[115-302] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQNLGK-K-VMFCAGDTFRAAGGTQLSEWGKRLSIPVI--QGP-E--GT--D-SAALAYDAVQAMKARGYDLLFVDTAGRLHTKHN--LMEELKK----VKR--A------IAKADPEE------PKEVWLVLDAVTGQNGLEQAKKFHEAVG-LTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57 PsiBlast_CBE 60.0638% -91 - C5 -2Q9B FTSY_THEAQ A:[115-302] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQNLGK-K-VMFCAGDTFRAAGGTQLSEWGKRLSIPVI--QGP-E--GT--D-PAALAYDAVQAMKARGYDLLFVDTAGRLHTKHN--LMEELKK----VKR--A------IAKADPEE------PKEVWLVLDAVTGQNGLEQAKKFHEAVG-LTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55 PsiBlast_CBE 59.8338% -88 - C5 -2Q9C FTSY_THEAQ A:[115-302] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTTTIAKLGRYYQNLGK-K-VMFCAGDTFRAAGGTQLSEWGKRLSIPVI--QGP-E--GT--D-PAALAYDAVQAMKARGYDLLFVDTAGRLHTKHN--LMEELKK----VKR--A------IAKADPEE------PKEVWLVLDAVTGQNGLEQAKKFHEAVG-LTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEALLED------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------