@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_1113: (2015-12-21 )
MPVIRVLVMLATMMMKLVKTAKEKKVFKNVGISIMGIAFWEAIKDSIKKQIKKSDWICGNVKTADDYLKTHPNSWFNSAIGVTAITAMLMNVCFADDQSKKEVAQAQKEAENARDRANKSGIELEQEEQKTEQEKQKTEQEKQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLVNKAEQNCQENHNQFFIKKLGIKAGIAIEIEAECKTPKPTKTNQTPIQPKHLPNSKQPHSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYRPSSIAYLELDPRDFNATEEWQKENLKIRSKAQAKMLEMRSLKPDPQAHLSTSQSLLLVQKIFADVSKEIKVVANTEKKVEKAGYGYSKRM

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MPVIRVLVMLATMMMKLVKTAKEKKVFKNVGISIMGIAFWEAIKDSIKKQIKKSDWICGNVKTADDYLKTHPNSWFNSAIGVTAITAMLMNVCFADDQSKKEVAQAQKEAENARDRANKSGIELEQEEQKTEQEKQKTEQEKQKTEQEKQKTEQEKQKTEQEKQKTSNIETNNQIKVEQEQQKTEQEKQKTNNTQKDLVNKAEQNCQENHNQFFIKKLGIKAGIAIEIEAECKTPKPTKTNQTPIQPKHLPNSKQPHSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYRPSSIAYLELDPRDFNATEEWQKENLKIRSKAQAKMLEMRSLKPDPQAHLSTSQSLLLVQKIFADVSKEIKVVANTEKKVEKAGYGYSKRM
30 Fugue 79.9412% 129 - C1 -3Q8T - BECN1_RAT A:[172-265] ------------------------------------------------------------------------------------------------GSDSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKLKKK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 Fugue 78.4720% 148 - C1 -1GD2 AP1_SCHPO E:[5-69] ----------------------------------------------------------------------------------------------DQEPSSKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRIL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 Fugue 75.7213% 122 - C1 -4QKW MURC_DANRE A:[3-103] ------------------------------------------------------------------------------------------------PVSALSILSLLERVSTIIDGVQASQQRMEERQQQLEGSVSAVQSELLKLARDHGATATTVDKLLQKARRVSTHVKEVRSRVEKQNVRVKKVETTQDELLTR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 Fugue 71.9311% 126 - C1 -2QA7 - HIP1_HUMAN A:[371-469] -----------------------------------------------------------------------------------------------------------DEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELRRQREDTEKAQRSLSEIERKAQANEQRYS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 Fugue 67.3614% 152 - C1 -1X8Y - LMNA_HUMAN A:[313-386] --------------------------------------------------------------------------------------------------------------------LAAKEAKLRDLEDSLARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEER-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 Fugue 64.9913% 145 - C1 -1SFC VAMP2_RAT A:[25-93] -----------------------------------------------------------------------------------------------NLTSNRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36 Fugue 63.6710% 87 - C1 -2B9C - TPM1_RAT A:[98-233] ---------------------------------------------------------------------------------------------------------ELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEDKVEELLSKNYHLENEVARLKKLVG----------------------------------------------------------------------------------------------------------------------------------------------
39 Fugue 62.7828% 210 * C1 *2L5G - NCOR2_HUMAN B:[166-207] ---------------------------------------------------------------------------------------------------------------------GLSKEELIQNMDRVDREITMVEQQISKLKKKQQQLEEEAAKP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 60.9827% -21 - C2 -2QF2 PCKGC_RAT A:[350-408] -----------------IKTIQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKEWRPQDEEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGKVIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNADLPYEIERELRALKQRISQM-------------------------------------------------------------------------------------------
17 PsiBlast_PDB 60.5327% -13 * C2 *2RKA PCKGC_RAT A:[350-408] -----------------IKTIQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKEWRPQDEEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEAKVIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNADLPYEIERELRALKQRISQM---------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 60.1425% -18 - C2 -2FAH PCKGM_CHICK A:[334-392] -----------------MATIARNTIFTNVGLRSDGGVYWDGLDEPTEPGVTYTSWLGKPWKHGDPEPCAHPNSRFCAPADQCPIMDPRWDDPEGVPIDAIIFGGRRPRGVPLVVEAFGWRHGVFMGSAMRSEATAAAEHKGGRLMHDPFAMRPFFGYNAGRYLEHWLSTGLRSNARLPRLFHVNWFLRDNEGRFVWPGFGHNARVLAWIFGRIQGRDTARPTPIGWVPKEGDLDLGGLPGVDYSQLFPMEKGFWEEECRQLREYYGENFGADLPRDVMAELEGLEERVRKM-------------------------------------------------------------------------------------------
16 PsiBlast_PDB 59.9027% -14 - C2 -2RK8 PCKGC_RAT A:[350-408] -----------------IKTIQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKEWRPQDEEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGKVIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNADLPYEIERELRALKQRISQM-------------------------------------------------------------------------------------------
15 PsiBlast_PDB 59.8627% -11 - C2 -2RK7 PCKGC_RAT A:[350-408] -----------------IKTIQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKEWRPQDEEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEAVIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNADLPYEIERELRALKQRISQM----------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 59.7727% -14 - C2 -3DT2 PCKGC_RAT A:[350-408] -----------------IKTIQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKEWRPQDEEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGKVIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNADLPYEIERELRALKQRISQM-------------------------------------------------------------------------------------------
4 PsiBlast_PDB 59.4730% 90 - C1 -1XGS MAP2_PYRFU A:[77-141] -----------------------------------------------------------------DYLKIDVGVHIDGFIADTAVT---VRVGMEED----ELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIVEKDSVIVTTE--------------------------------------------------------------------------------------------
5 PsiBlast_PDB 59.3530% 87 - C1 -1XGM MAP2_PYRFU A:[77-141] -----------------------------------------------------------------DYLKIDVGVHIDGFIADTAVT---VRVGMEED----ELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIVEKDSVIVTTE--------------------------------------------------------------------------------------------
10 PsiBlast_PDB 59.3227% -5 - C2 -4OX2 ? A:[348-406] -----------------IKTIQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKEWRP---EPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEAVIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKLPKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNADLPYEIERELRALKQRISQM----------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 59.2330% 88 - C1 -1WKM MAP2_PYRFU A:[77-141] -----------------------------------------------------------------DYLKIDVGVHIDGFIADTAVT---VRVGMEED----ELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIVEKDSVIVTTE--------------------------------------------------------------------------------------------
9 PsiBlast_PDB 59.1530% 80 - C1 -2DFI MAP2_PYRFU A:[77-141] -----------------------------------------------------------------DYLKIDVGVHIDGFIADTAVT---VRVGMEED----ELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIVEKDSVIVTQDMINKST--------------------------------------------------------------------------------------
8 PsiBlast_PDB 59.1530% 89 - C1 -1XGO - MAP2_PYRFU A:[77-141] -----------------------------------------------------------------DYLKIDVGVHIDGFIADTAVT---VRVGMEED----ELMEAAKEALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVNLSGHKIERYKLHAGISIPNIYRPHDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMYVRDVPVRVAQARFLLAKIKREYGTLPFAYRWLQNDMPEGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIVEKDSVIVTTE--------------------------------------------------------------------------------------------