@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : jhp_1141: (2015-12-21 )
MLVEIENLTKTYGSLKALDNISLKLPKQQFIGLLGPNGAGKTTLLKILAGLNLNYQGEVKILNQKIGIETKKSVAFLSDGDFLDPKLTPLKAIAFYKDFFSDFDESKALNLLKRFSVPLKREFKALSKGMREKLQLILTLSRNASLYLFDEPVAGIDPIAREEIFELIAKEFSQNASLLVSTHLVVDVEKYLDSAIFLKEAKVVAFGDVGELKKGYSSLEAAYKERLK
Atome Classification :
(20 SA)
--.........10.--.-.--.....20........30........40........50.......-----.-----60.....---.------.-------.70.-------........80.......-----.90....---------------.---...100--------------.---.--.....-----.110-------.--.------..-.-.--.--120..----------.-..--..130.......140.......150.......160.......170.-.-.....180.......190.......200.......210....----...220......------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
--
M
L
V
E
I
E
N
L
T
K
T
Y
--G-
S
--
L
K
A
LDNISLKL
P
K
Q
Q
F
I
G
L
LGPNGA
G
K
T
T
L
L
K
I
L
A
GLNLNYQ
G
E
-----
V
-----
K
I
L
N
Q
KI---G------
I
-------
E
T-K-------
K
S
V
A
FLSDGDFLDPKLT-----
P
L
K
A
I
A
F
---------------
Y
---
K
D
F
F
S
---------------D---F--
D
E
S
K
A
-----
L
N
L
L
-------
K
--
R
------FS-V-
P
--
L
--
K
R
E
F
K
----------
A
-
L
S
--
K
G
M
R
E
K
L
Q
L
I
L
T
LSRN
A
S
L
Y
L
FDEPVAGIDP
I
A
R
E
E
I
F
E
L
I
A
K
E
FS-Q-NA
S
L
L
V
S
T
H
L
V
V
D
V
E
K
Y
L
D
S
A
I
F
L
K
E
A
K
V
V
A
FG
D
V
G
E
L
K
K
G
Y
----
S
S
L
E
A
A
Y
K
E
RLK------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
93.35
26%
-108
- C1 -
1VPL
2
?
A:
[16-251]
----
V
V
V
K
D
L
R
K
R
I
--
G
-
K
--
K
E
I
L
K
G
I
S
F
E
I
E
E
G
E
I
F
G
L
I
G
P
N
G
A
G
K
T
T
T
L
R
I
I
S
T
L
I
K
P
S
S
G
I
-----
V
-----
T
V
F
G
K
N
V
VEE
P
------
H
-------
E
V
-
R
-------
K
L
I
S
Y
L
P
E
E
A
G
A
Y
R
N
M
Q
-----
G
I
E
Y
L
R
F
---------------
V
---
A
G
F
Y
A
---------------
S
------
S
S
S
E
I
-----
E
E
M
V
-------
E
--
R
A
T
E
I
A
G
L
G
-
E
-
K
--
I
--
K
D
R
V
S
----------
T
-
Y
S
--
K
G
M
V
R
K
L
L
I
A
R
A
L
M
V
N
P
R
L
A
I
L
D
E
P
T
S
G
L
D
V
L
N
A
R
E
V
R
K
I
L
K
Q
A
S
Q
-
E
-
G
L
T
I
L
V
S
S
H
N
M
L
E
V
E
F
L
C
D
R
I
A
L
I
H
N
G
T
I
V
E
T
G
T
V
E
E
L
K
E
R
Y
KA--
Q
N
I
E
E
V
F
E
E
V
V
K
------------------------------------------------------------------------------------------------------------
25
HHSearch
89.59
25%
-94
- C1 -
1Z47
1
?
A:
[13-237]
--
M
T
I
E
F
V
G
V
E
K
I
Y
--
P
G
G
--
A
R
S
V
R
G
V
S
F
Q
I
R
E
G
E
M
V
G
L
L
G
P
S
G
S
G
K
T
T
I
L
R
L
I
A
G
L
E
R
P
T
K
G
D
-----
V
-----
W
I
G
G
K
R
V
---
T
------
D
LP-----
P
Q
-
K
-------
R
N
V
G
L
V
F
Q
N
Y
A
L
F
Q
H
M
T
-----
V
Y
D
N
V
S
F
---------------
G
---
L
R
E
K
R
---------------
V
P
K
D
E
--
M
D
A
R
V
-----
R
E
L
L
-------
R
--
F
------
M
R
-
L
-
E
--
S
YA
N
R
F
P
H
----------
E
-
L
S
--
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
A
P
R
P
Q
V
L
L
F
D
E
P
F
A
A
I
D
T
Q
I
R
R
E
L
R
T
F
V
R
Q
V
H
D
E
M
-
G
V
T
S
V
F
V
T
H
D
Q
E
E
A
L
E
V
A
D
R
V
L
V
L
H
E
G
N
V
E
Q
F
G
T
P
E
E
V
Y
E
K
P
----
G
T
L
F
V
A
S
F
I
G
E
S
------------------------------------------------------------------------------------------------------------
52
Fugue
88.99
25%
-86
- C1 -
1Z47
1
?
A:
[11-355]
GS
M
T
I
E
F
V
G
V
E
K
I
Y
P-
G
-
G
--
A
R
S
V
R
G
V
S
F
Q
I
R
E
G
E
M
V
G
L
L
G
P
S
G
S
G
K
T
T
I
L
R
L
I
A
G
L
E
R
P
T
K
G
D
-----
V
-----
W
I
G
G
K
R
V
TD-
L
------
P
-------
P
Q
-
K
-------
R
N
V
G
L
V
F
Q
N
Y
A
L
F
Q
H
M
T
-----
V
Y
D
N
V
S
F
G
L
R
------------
E
---
K
R
V
P
K
---------------
D
---
E
--
M
D
A
R
V
-----
R
E
L
L
-------
R
--
F
------
M
R
-
L
-
E
--
S
YA
N
R
F
P
H
----------
E
-
L
S
--
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
A
P
R
P
Q
V
L
L
F
D
E
P
F
A
A
I
D
T
Q
I
R
R
E
L
R
T
F
V
R
Q
V
H
D
-
E
M
G
V
T
S
V
F
V
T
H
D
Q
E
E
A
L
E
V
A
D
R
V
L
V
L
H
E
G
N
V
E
Q
F
G
T
P
E
E
V
Y
E
K
P
----
G
T
L
F
V
A
S
F
I
G
E
S
N
V
W
T
R
A
V
Q
NG
R
I
E
V
AG
A
A
L
P
V
DPAVSEG
S
E
V
A
V
V
V
R
PKD
V
E
L
Q
P
A
S
EREAHAQVV
R
S
A
F
KGS
Y
S
A
C
W
I
R
T
KD
G
E
V
W
E
V
H
V
P
SADRHRWSPG
A
W
V
H
M
N
V
T
R
W
F
I
F
P
R--
49
Fugue
88.84
26%
-81
- C1 -
1OXS
23
?
C:
[1-352]
-M
V
R
I
I
V
K
N
V
S
K
V
F
KK
G
-
K
--
V
V
A
L
D
N
V
N
I
N
I
E
N
G
E
R
F
G
I
L
G
P
S
G
A
G
K
T
T
F
M
R
I
I
A
G
L
D
V
P
S
T
G
E
-----
L
-----
Y
F
D
D
R
L
V
---
A
------
S
-------
N
G
-
K
LIVPPED
R
K
I
G
M
V
F
Q
T
W
A
L
Y
P
N
L
T
-----
A
F
E
N
I
A
F
---------------
P
LTN
M
K
M
S
K
---------------
E
---
E
--
I
R
K
R
V
-----
E
E
V
A
-------
K
IL
D
------
I
H
-
H
-
V
--
L
--
N
H
F
P
R
----------
E
-
L
S
--
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
V
K
D
P
S
L
L
L
L
D
E
P
F
S
N
L
D
A
R
M
R
D
S
A
R
A
L
V
K
E
V
Q
S
-
R
L
G
V
T
L
L
V
V
S
H
D
P
A
D
I
F
A
I
A
D
R
V
G
V
L
V
K
G
K
L
V
Q
V
G
K
P
E
D
L
Y
D
N
P
----
V
S
I
Q
V
A
S
L
I
G
E
I
NELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK
34
HHSearch
88.79
26%
-92
- C1 -
1OXX
21
?
K:
[3-232]
---
R
I
I
V
K
N
V
S
K
V
F
--
K
-
K
GK
V
V
A
L
D
N
V
N
I
N
I
E
N
G
E
R
F
G
I
L
G
P
S
G
A
G
K
T
T
F
M
R
I
I
A
G
L
D
V
P
S
T
G
E
-----
L
-----
Y
F
D
D
R
L
V
---
A
------
S
NGKLIVP
P
E
-
D
-------
R
K
I
G
M
V
F
Q
T
W
A
L
Y
P
N
L
T
-----
A
F
E
N
I
A
F
---------------
P
---
L
T
N
M
K
MSK------------
E
---
E
--
I
R
K
R
V
-----
E
E
V
A
-------
K
--
I
------
L
D
-
I
-
H
--
H
VL
N
H
F
P
R
----------
E
-
L
S
--
G
A
Q
Q
Q
R
V
A
L
A
R
A
L
V
K
D
P
S
L
L
L
L
D
E
P
F
S
N
L
D
A
R
M
R
D
S
A
R
A
L
V
K
E
V
Q
S
R
L
-
G
V
T
L
L
V
V
S
H
D
P
A
D
I
F
A
I
A
D
R
V
G
V
L
V
K
G
K
L
V
Q
V
G
K
P
E
D
L
Y
D
N
P
----
V
S
I
Q
V
A
S
L
I
G
E
I
------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
88.34
27%
-92
- C1 -
4RVC
-
?
A:
[3-238]
---
L
L
E
V
K
D
L
S
G
G
Y
--
T
-
A
--
Q
N
V
L
E
D
V
T
F
V
V
D
R
G
E
M
V
A
L
I
G
L
N
G
A
G
K
S
T
T
I
K
H
I
I
G
L
M
E
P
R
R
G
A
-----
I
-----
S
I
N
G
Y
R
L
AD-
G
------
P
-------
E
T
Y
R
-------
R
Q
F
A
Y
I
P
E
T
P
V
L
Y
E
E
L
T
L
E
E
H
L
R
L
A
A
M
A
Y
---------------------------------------
G
---
L
--
S
E
A
E
---------
Y
-------
E
--
R
------
R
L
-
P
-
P
--
L
--
L
R
E
F
R
LERRLSSFPA
H
-
F
S
--
K
G
M
K
Q
K
V
M
I
V
C
A
F
L
L
E
P
P
L
Y
I
I
D
E
P
F
L
G
L
D
P
L
A
I
H
A
L
L
E
R
M
N
E
Q
K
A
-
K
-
G
A
G
I
L
L
S
T
H
I
L
A
T
A
E
R
Y
C
D
S
F
V
I
L
H
N
G
R
V
K
A
K
G
T
L
D
D
I
R
R
Q
F
GLRG
A
S
L
D
E
L
Y
V
E
L
T
K
------------------------------------------------------------------------------------------------------------
44
HHSearch
88.25
27%
-99
- C1 -
1VPL
2
?
A:
[17-237]
-----
V
V
K
D
L
R
K
R
I
--
G
-
K
--
K
E
I
L
K
G
I
S
F
E
I
E
E
G
E
I
F
G
L
I
G
P
N
G
A
G
K
T
T
T
L
R
I
I
S
T
L
I
K
P
S
S
G
I
-----
V
-----
T
V
F
G
K
N
V
---
V
EE
P
---
H
-------
E
V
-
R
-------
K
L
I
S
Y
L
P
E
E
A
G
A
Y
R
N
M
Q
-----
G
I
E
Y
L
R
F
---------------
V
---
A
G
F
Y
A
---------------
S
S
S
S
E
--
I
E
E
M
V
-----
E
R
A
T
-------
E
--
I
------
A
G
-
L
-
G
--
E
KI
K
D
R
V
S
----------
T
-
Y
S
--
K
G
M
V
R
K
L
L
I
A
R
A
L
M
V
N
P
R
L
A
I
L
D
E
P
T
S
G
L
D
V
L
N
A
R
E
V
R
K
I
L
K
Q
A
S
Q
-
E
-
G
L
T
I
L
V
S
S
H
N
M
L
E
V
E
F
L
C
D
R
I
A
L
I
H
N
G
T
I
V
E
T
G
T
V
E
E
L
K
E
R
Y
----
K
A
Q
N
I
E
E
V
F
E
E
V
------------------------------------------------------------------------------------------------------------
41
HHSearch
87.15
27%
-98
- C1 -
1JI0
1
?
A:
[6-231]
---
V
L
E
V
Q
S
L
H
V
Y
Y
--
G
-
A
--
I
H
A
I
K
G
I
D
L
K
V
P
R
G
Q
I
V
T
L
I
G
A
N
G
A
G
K
T
T
T
L
S
A
I
A
G
L
V
R
A
Q
K
G
K
-----
I
-----
I
F
N
G
Q
D
I
---
T
------
N
KP
A
H
V
--
I
N
-
R
-------
M
G
I
A
L
V
P
E
G
R
R
I
F
P
E
L
T
-----
V
Y
E
N
L
M
M
---------------
G
---
A
Y
N
R
K
---------------
D
---
K
E
G
I
K
R
D
L
-----
E
W
I
F
-------
S
--
L
------
F
P
R
L
-
K
E
R
L
--
K
Q
L
G
G
----------
T
-
L
S
--
G
G
E
Q
Q
M
L
A
I
G
R
A
L
M
S
R
P
K
L
L
M
M
D
E
P
S
L
G
L
A
P
I
L
V
S
E
V
F
E
V
I
Q
K
I
N
Q
-
E
-
G
T
T
I
L
L
V
E
Q
N
A
L
G
A
L
K
V
A
H
Y
G
Y
V
L
E
T
G
Q
I
V
L
E
G
K
A
S
E
L
L
D
N
E
----
M
V
R
K
A
Y
L
G
V
A
--------------------------------------------------------------------------------------------------------------
31
HHSearch
86.16
25%
-93
- C1 -
3D31
-
?
A:
[1-219]
---
M
I
E
I
E
S
L
S
R
K
W
--
K
-
N
---
F
S
L
D
N
L
S
L
K
V
E
S
G
E
Y
F
V
I
L
G
P
T
G
A
G
K
T
L
F
L
E
L
I
A
G
F
H
V
P
D
S
G
R
-----
I
-----
L
L
D
G
K
D
V
---
T
------
D
LS-----
P
E
-
K
-------
H
D
I
A
F
V
Y
Q
N
Y
S
L
F
P
H
M
N
-----
V
K
K
N
L
E
F
---------------
G
---
M
R
M
K
K
---------------
I
---
K
--
D
P
K
R
V
-----
L
D
T
A
-------
R
--
D
------
L
K
-
I
-
E
--
H
LL
D
R
N
P
L
----------
T
-
L
S
--
G
G
E
Q
Q
R
V
A
L
A
R
A
L
V
T
N
P
K
I
L
L
L
D
E
P
L
S
A
L
D
P
R
T
Q
E
N
A
R
E
M
L
S
V
L
H
K
K
N
-
K
L
T
V
L
H
I
T
H
D
Q
T
E
A
R
I
M
A
D
R
I
A
V
V
M
D
G
K
L
I
Q
V
G
K
P
E
E
I
F
E
K
P
----
V
E
G
R
V
A
S
F
V
G
F
E
------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
86.08
25%
-86
- C1 -
1OXS
19
?
C:
[6-238]
------
V
K
N
V
S
K
V
F
KK
G
-
K
--
V
V
A
L
D
N
V
N
I
N
I
E
N
G
E
R
F
G
I
L
G
P
S
G
A
G
K
T
T
F
M
R
I
I
A
G
L
D
V
P
S
T
G
E
-----
L
-----
Y
F
D
D
R
L
V
---
A
------
S
-------
N
G
-
K
LIVPPED
R
K
I
G
M
V
F
Q
T
W
A
L
Y
P
N
L
T
-----
A
F
E
N
I
A
F
PLTNMKMSKEEIRKR
V
---
E
E
V
A
K
---------------
I
---
L
--
D
I
H
H
V
-----
L
N
H
F
-------
P
--
R
--------------------------------
E
-
L
S
--
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
V
K
D
P
S
L
L
L
L
D
E
P
F
S
N
L
D
A
R
M
R
D
S
A
R
A
L
V
K
E
V
Q
S
-
R
L
G
V
T
L
L
V
V
S
H
D
P
A
D
I
F
A
I
A
D
R
V
G
V
L
V
K
G
K
L
V
Q
V
G
K
P
E
D
L
Y
D
N
P
----
V
S
I
Q
V
A
S
L
I
G
E
I
------------------------------------------------------------------------------------------------------------
32
HHSearch
85.78
25%
-97
- C1 -
2YYZ
3
?
A:
[2-225]
--
P
S
I
R
V
V
N
L
K
K
Y
F
--
G
-
K
--
V
K
A
V
D
G
V
S
F
E
V
K
D
G
E
F
V
A
L
L
G
P
S
G
C
G
K
T
T
T
L
L
M
L
A
G
I
Y
K
P
T
S
G
E
-----
I
-----
Y
F
D
D
V
L
V
---
N
------
D
IP-----
P
K
-
Y
-------
R
E
V
G
M
V
F
Q
N
Y
A
L
Y
P
H
M
T
-----
V
F
E
N
I
A
F
---------------
P
---
L
R
A
R
R
ISK------------
D
---
E
--
V
E
K
R
V
-----
V
E
I
A
-------
R
--
K
------
L
L
-
I
-
D
--
N
LL
D
R
K
P
T
----------
Q
-
L
S
--
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
V
K
Q
P
K
V
L
L
F
D
E
P
L
S
N
L
D
A
N
L
R
M
I
M
R
A
E
I
K
H
L
Q
Q
E
L
-
G
I
T
S
V
Y
V
T
H
D
Q
A
E
A
M
T
M
A
S
R
I
A
V
F
N
Q
G
K
L
V
Q
Y
G
T
P
D
E
V
Y
D
S
P
----
K
N
M
F
V
A
S
F
I
G
N
P
------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
85.68
25%
-83
- C1 -
1OXU
7
?
A:
[6-238]
------
V
K
N
V
S
K
V
F
KK
G
-
K
--
V
V
A
L
D
N
V
N
I
N
I
E
N
G
E
R
F
G
I
L
G
P
S
G
A
G
K
T
T
F
M
R
I
I
A
G
L
D
V
P
S
T
G
E
-----
L
-----
Y
F
D
D
R
L
V
---
A
------
S
-------
N
G
-
K
LIVPPED
R
K
I
G
M
V
F
Q
T
W
A
L
Y
P
N
L
T
-----
A
F
E
N
I
A
F
PLTNMKMS
K
E
E
I
R
K
R
V
---
E
E
V
A
K
---------------
I
---
L
--
D
I
H
H
V
-----
L
N
H
F
-------
P
--
R
--------------------------------
E
-
L
S
--
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
V
K
D
P
S
L
L
L
L
D
E
P
F
S
N
L
D
A
R
M
R
D
S
A
R
A
L
V
K
E
V
Q
S
-
R
L
G
V
T
L
L
V
V
S
H
D
P
A
D
I
F
A
I
A
D
R
V
G
V
L
V
K
G
K
L
V
Q
V
G
K
P
E
D
L
Y
D
N
P
----
V
S
I
Q
V
A
S
L
I
G
E
I
------------------------------------------------------------------------------------------------------------
26
HHSearch
85.52
24%
-96
- C1 -
3FVQ
3
FBPC_NEIG1
A:
[4-231]
---
A
L
H
I
G
H
L
S
K
S
F
--
Q
-
N
--
T
P
V
L
N
D
I
S
L
S
L
D
P
G
E
I
L
F
I
I
G
A
S
G
C
G
K
T
T
L
L
R
C
L
A
G
F
E
Q
P
D
S
G
E
-----
I
-----
S
L
S
G
K
T
I
---
F
SKN
T
N
L
P
-------
V
R
-
E
-------
R
R
L
G
Y
L
V
Q
E
G
V
L
F
P
H
L
T
-----
V
Y
R
N
I
A
Y
---------------
G
---
L
G
N
G
K
GRT------------
A
---
Q
--
E
R
Q
R
I
-----
E
A
M
L
-------
E
--
L
------
T
G
-
I
-
S
--
E
LA
G
R
Y
P
H
----------
E
-
L
S
--
G
G
Q
Q
Q
R
A
A
L
A
R
A
L
A
P
D
P
E
L
I
L
L
D
E
P
F
S
A
L
D
E
Q
L
R
R
Q
I
R
E
D
M
I
A
A
L
R
A
N
-
G
K
S
A
V
F
V
S
H
D
R
E
E
A
L
Q
Y
A
D
R
I
A
V
M
K
Q
G
R
I
L
Q
T
A
S
P
H
E
L
Y
R
Q
P
----
A
D
L
D
A
A
L
F
I
G
E
G
------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
85.23
24%
-93
- C1 -
4U00
3
?
A:
[4-225]
---
I
I
R
I
R
N
L
H
K
W
F
--
G
-
P
--
L
H
V
L
K
G
I
H
L
E
V
A
P
G
E
K
L
V
I
I
G
P
S
G
S
G
K
S
T
L
I
R
T
I
N
R
L
E
D
F
Q
E
G
E
-----
V
V
V
DGL
S
V
K
D
D
R
A
---
L
------
R
-------
E
I
-
R
-------
R
E
V
G
M
V
F
Q
Q
F
N
L
F
P
H
M
T
-----
V
L
E
N
V
T
L
A
P
M
R
-----------
V
---
R
R
W
P
R
---------------
E
---
K
--
A
E
K
K
A
-----
L
E
L
L
-------
E
--
R
------
V
G
-
I
L
D
--
Q
--
A
R
K
Y
P
----------
A
Q
L
S
--
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
A
M
E
P
K
I
M
L
F
D
E
P
T
S
A
L
D
P
E
M
V
G
E
V
L
D
V
M
R
D
L
A
Q
-
G
-
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
A
D
R
V
V
F
M
D
G
G
Q
I
V
E
E
G
R
P
E
E
I
F
T
R
P
----
K
E
E
R
T
R
S
F
L
Q
R
V
------------------------------------------------------------------------------------------------------------
30
HHSearch
85.22
24%
-100
- C1 -
3RLF
3
MALK_ECOLI
A:
[2-225]
--
A
S
V
Q
L
Q
N
V
T
K
A
W
--
G
-
E
--
V
V
V
S
K
D
I
N
L
D
I
H
E
G
E
F
V
V
F
V
G
P
S
G
C
G
K
S
T
L
L
R
M
I
A
G
L
E
T
I
T
S
G
D
-----
L
-----
F
I
G
E
K
R
M
---
N
------
D
TP-----
P
A
-
E
-------
R
G
V
G
M
V
F
Q
S
Y
A
L
Y
P
H
L
S
-----
V
A
E
N
M
S
F
---------------
G
---
L
K
L
A
G
AK
K
------------
E
---
V
--
I
N
Q
R
V
-----
N
Q
V
A
-------
E
--
V
------
L
Q
-
L
-
A
--
H
LL
D
R
K
P
K
----------
A
-
L
S
--
G
G
Q
R
Q
R
V
A
I
G
R
T
L
V
A
E
P
S
V
F
L
L
D
E
P
L
S
N
L
D
A
A
L
R
V
Q
M
R
I
E
I
S
R
L
H
K
R
L
-
G
R
T
M
I
Y
V
T
H
D
Q
V
E
A
M
T
L
A
D
K
I
V
V
L
D
A
G
R
V
A
Q
V
G
K
P
L
E
L
Y
H
Y
P
----
A
D
R
F
V
A
G
F
I
G
S
P
------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
85.04
26%
-95
- C1 -
4YMU
2
?
J:
[1-223]
---
M
I
F
V
N
D
V
Y
K
N
F
--
G
-
S
--
L
E
V
L
K
G
V
T
L
K
V
N
K
G
E
V
V
V
I
I
G
P
S
G
S
G
K
S
T
L
L
R
C
I
N
L
L
E
E
P
T
K
G
E
VFIDG
V
-----
K
I
N
N
G
K
V
---
N
------
I
N------
K
V
-
R
-------
Q
K
V
G
M
V
F
Q
H
F
N
L
F
P
H
L
T
-----
A
I
E
N
I
T
L
APVK-----------
V
---
K
K
M
N
K
---------------
K
---
E
--
A
E
E
L
A
-----
V
D
L
L
AKVGLLD
K
--
K
------
D
Q
-
Y
-
P
--
I
--
K
----------------
L
S
--
G
G
Q
K
Q
R
L
A
I
A
R
A
L
A
M
Q
P
E
V
M
L
F
D
E
P
T
S
A
L
D
P
E
M
V
K
E
V
L
N
V
M
K
Q
L
A
N
-
E
-
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
G
D
R
V
I
F
M
D
D
G
V
I
V
E
E
G
T
P
E
E
I
F
Y
R
A
----
K
N
E
R
T
R
E
F
L
S
K
I
------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
84.69
26%
-95
- C1 -
4YMW
-
?
J:
[1-223]
---
M
I
F
V
N
D
V
Y
K
N
F
--
G
-
S
--
L
E
V
L
K
G
V
T
L
K
V
N
K
G
E
V
V
V
I
I
G
P
S
G
S
G
K
S
T
L
L
R
C
I
N
L
L
E
E
P
T
K
G
E
VFIDG
V
-----
K
I
N
N
G
K
V
---
N
------
I
N------
K
V
-
R
-------
Q
K
V
G
M
V
F
Q
H
F
N
L
F
P
H
L
T
-----
A
I
E
N
I
T
L
APVK-----------
V
---
K
K
M
N
K
---------------
K
---
E
--
A
E
E
L
A
-----
V
D
L
L
AKVGLLD
K
--
K
------
D
Q
-
Y
-
P
--
I
--
K
----------------
L
S
--
G
G
Q
K
Q
R
L
A
I
A
R
A
L
A
M
Q
P
E
V
M
L
F
D
E
P
T
S
A
L
D
P
E
M
V
K
E
V
L
N
V
M
K
Q
L
A
N
-
E
-
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
G
D
R
V
I
F
M
D
D
G
V
I
V
E
E
G
T
P
E
E
I
F
Y
R
A
----
K
N
E
R
T
R
E
F
L
S
K
I
------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
84.62
25%
-89
- C1 -
1OXT
-
?
A:
[6-238]
------
V
K
N
V
S
K
V
F
KK
G
-
K
--
V
V
A
L
D
N
V
N
I
N
I
E
N
G
E
R
F
G
I
L
G
P
S
G
A
G
K
T
T
F
M
R
I
I
A
G
L
D
V
P
S
T
G
E
-----
L
-----
Y
F
D
D
R
L
V
---
A
------
S
-------
N
G
-
K
LIVPPED
R
K
I
G
M
V
F
Q
T
W
A
L
Y
P
N
L
T
-----
A
F
E
N
I
A
F
PLTNMKMS
K
E
E
I
R
K
R
V
---
E
E
V
A
K
---------------
I
---
L
--
D
I
H
H
V
-----
L
N
H
F
-------
P
--
R
--------------------------------
E
-
L
S
--
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
V
K
D
P
S
L
L
L
L
D
E
P
F
S
N
L
D
A
R
M
R
D
S
A
R
A
L
V
K
E
V
Q
S
-
R
L
G
V
T
L
L
V
V
S
H
D
P
A
D
I
F
A
I
A
D
R
V
G
V
L
V
K
G
K
L
V
Q
V
G
K
P
E
D
L
Y
D
N
P
----
V
S
I
Q
V
A
S
L
I
G
E
I
------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
84.62
27%
-104
- C1 -
1JI0
1
?
A:
[5-226]
--
I
V
L
E
V
Q
S
L
H
V
Y
Y
--
G
-
A
--
I
H
A
I
K
G
I
D
L
K
V
P
R
G
Q
I
V
T
L
I
G
A
N
G
A
G
K
T
T
T
L
S
A
I
A
G
L
V
R
A
Q
K
G
K
-----
I
I
F
NGQ
D
I
T
N
K
P
A
---
H
------
V
-------
I
N
-
R
-------
M
G
I
A
L
V
P
E
G
R
R
I
F
P
E
L
T
-----
V
Y
E
N
L
M
M
---------------
G
---
A
Y
N
R
K
---------------
D
---
K
--
E
G
I
K
R
D
L
E
W
I
F
S
L
F
-------
P
--
R
------
L
K
-
E
-
R
--
L
--
K
Q
L
G
G
----------
T
-
L
S
--
G
G
E
Q
Q
M
L
A
I
G
R
A
L
M
S
R
P
K
L
L
M
M
D
E
P
S
L
G
L
A
P
I
L
V
S
E
V
F
E
V
I
Q
K
I
N
Q
-
E
-
G
T
T
I
L
L
V
E
Q
N
A
L
G
A
L
K
V
A
H
Y
G
Y
V
L
E
T
G
Q
I
V
L
E
G
K
A
S
E
L
L
D
N
E
----
M
V
R
K
A
Y
L
G
V
A
--------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
84.50
28%
-96
- C1 -
4WBS
1
?
A:
[42-265]
------
V
R
N
L
K
K
R
Y
--
G
-
S
--
R
T
V
V
K
D
V
S
L
D
V
K
S
G
E
V
V
G
L
L
G
P
N
G
A
G
K
T
T
S
F
Y
M
I
V
G
L
V
P
L
D
A
G
E
-----
I
-----
D
L
D
G
K
S
I
---
S
LLP---
I
-------
H
K
-
R
-------
A
S
L
G
L
----
S
Y
L
P
Q
E
A
S
-----
V
F
R
K
L
S
V
---------------
E
---
E
N
I
R
A
V
L
E
L
QVGDDGKRLS
K
D
---
A
--
I
A
S
R
T
-----
E
A
L
L
-------
D
--
E
------
L
Q
-
I
-
S
--
H
--
L
R
E
N
P
----------
A
-
L
S
LS
G
G
E
R
R
R
V
E
I
A
R
A
L
A
T
N
P
S
F
I
L
L
D
E
P
F
A
G
V
D
P
I
A
V
L
E
I
Q
K
I
V
K
F
L
K
Q
-
R
-
N
I
G
V
L
I
T
D
H
N
V
R
E
T
L
G
I
C
D
H
A
Y
I
I
S
D
G
S
V
L
A
A
G
A
P
G
D
I
I
E
N
E
----
S
V
R
R
V
Y
L
G
E
H
F
R
------------------------------------------------------------------------------------------------------------