@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_1178: (2015-12-21 )
MDIKACYQNAQALLEGHFLLSSGFHSNYYLQSAKVLEDPKLAEQLALELAKQIQEAHLNIECVCSPAIGGILAGYELARALGVRFIFTERVDNTMTLRRGFEVKKNEKILVCEDIITTGKSAMECAKVLEEKGAQIVAFGALANRGICKRAHSHLKAQEGACLPSHLPLFALEDFVFDMHKPSSCPLCATSVAIKPGSRGN

Atome Classification :

(20 SA) ----------------------------.........10........20----....---....30........40........50.....--...60........70........80-------..---------....--..90---.---------------..------------------.--------------...-----.100.--...---------....110.......120.......130........140.......150.......160.-.-------.-.-----...170.......180.......190.......200
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------MDIKACYQNAQALLEGHFLLS----SGFH---SNYYLQSAKVLEDPKLAEQLALELAKQIQEA--HLNIECVCSPAIGGILAGYELARAL-------GV---------RFIF--TERV---D---------------NT------------------M--------------TLR-----RG-FE--VKK---------NEKILVCEDIITTGKSAMECAKVLEE-KGAQIVAFGALANRGICKRAHSHLKAQEGACL-P-------S-H-----LPLFALEDFVFDMHKPSSCPLCATSVAIKPGSRGN
54 Fugue 96.9398%-148 - C1 -4PAW PYRE_HELPY A:[22-218] ---------------------------HMDIKACYQNAKALLEGHFLLS----SGFH---SNYYLQSAKVLEDPKLAEQLALELAKQIQEA--HLNIECVCSPAIGGILAGYELARAL-------GV---------RFIF--TERV---D---------------NT------------------M--------------ALR-----RG-FE--VKK---------NEKILVCEDIITTGKSAMECAKVLEE-KGAQIVAFGALANRGICKRAHSHLKAQEGACL-P-------S-H-----LPLFALEDFVFDMHKPSSCPLCATSVAIKP-----
1 PsiBlast_PDB 96.6699%-148 - C1 -4PAW PYRE_HELPY A:[23-218] ----------------------------MDIKACYQNAKALLEGHFLLS----SGFH---SNYYLQSAKVLEDPKLAEQLALELAKQIQEA--HLNIECVCSPAIGGILAGYELARAL-------GV---------RFIF--TERV---D---------------NT------------------M--------------ALR-----RG-FE--VKK---------NEKILVCEDIITTGKSAMECAKVLEE-KGAQIVAFGALANRGICKRAHSHLKAQEGACL-P-------S-H-----LPLFALEDFVFDMHKPSSCPLCATSVAIKP-----
21 PsiBlast_CBE 95.0299%-149 - C1 -4PAW PYRE_HELPY B:[23-218] ----------------------------MDIKACYQNAKALLEGHFLLS----SGFH---SNYYLQSAKVLEDPKLAEQLALELAKQIQEA--HLNIECVCSPAIGGILAGYELARAL-------GV---------RFIF--TERV---D---------------NT------------------M--------------ALR-----RG-FE--VKK---------NEKILVCEDIITTGKSAMECAKVLEE-KGAQIVAFGALANRGICKRAHSHLKAQEGACL-P-------S-H-----LPLFALEDFVFDMHKPSSCPLCATSVAIKP-----
47 HHSearch 55.2819%-116 - C1 -1G2Q - APT1_YEAST A:[8-178] ----------------------------QELKLALHQYPNFPSEG----------------ILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALAL-------GV---------GFVP--VRKAGKLP---------------GE------------------CFKATYEKEYGSDLFEIQ-----KN--A--IPA---------GSNVIIVDDIIATGGSAAAAGELVEQ-LEANLLEYNFVMELDFL---------KGRSKL-----------N-----APVFTLL----------------------------
51 HHSearch 55.1519%-141 - C1 -1O57 PURR_BACSU A:[100-256] -------------------------------------------------------------GGYVYLTDILGKPSVLSKVGKLFASVFAE----REIDVVMTVATKGIPLAYAAASYL-------NV---------PVVI--VRKD-------------------GSTVSINYVSGS--------SNRIQTM--------SLA-----KR--S--MKT---------GSNVLIIDDFMKAGGTINGMINLLDE-FNANVAGIGVLVEAEGV-----------DERL-----------V-----DEYMSLLTLSTINMKEKSIEIQNGNFLRFFKDN--
5 PsiBlast_PDB 52.1525%-115 - C1 -3DEZ PYRE_STRMU A:[46-185] ----------------------------LDIKAVYLKP----EEPFTW-------IK---SPIYTDNRITLSYPETRTLIENGFVETIKEA--FPEVEVIAGTATAGIPHGAIIADKM-------NLPL-------AYIR--SKPK-------------------------------------------------------NQ-----IE-GR--VTK---------GQKMVIIEDLISTGGSVLDAVAAAQR-EGADVLGVVAIFTYELPKATANFEKASVKLVT-L-------S-N-----YSELIKVAKVQGYIDADGLTLLKKFKENQETWQD-
62 Fugue 51.4317%-122 - C1 -4FYM - ? G:[9-260] EFLCDEEIYKSFVHLKDKICEERKKKELVSYSSYIKEMKKLLKVVLLKY----KALKFRKSNYFF-SSGVLNNIVSSNIICFLLSELILKN--KLSFDYLLGASYKGIPMVSLTSHFLFESKKYSNI---------FYLY--DRVI---V---------------GN------------------L--------------D---------------DE---------KKNIIIIDDVFTCGTALTEILAKLKTYEHLKVVAFIVLLNRNEYEINENNQKIYFKDIF-E-------K-RVGIPLYSILSYKDDIQSMI---------------------
44 HHSearch 50.9515%-107 - C1 -1QB7 ? A:[23-219] ------------------------------------------KKSYRWYSPVFSPRN---VPRFADVSSITESPETLKAIRDFLVQRYRAM--SPAPTHILGFDARGFLFGPMIAVEL-------EI---------PFVL--MRKADKNA---------------GLLIRSEPYEKEYKEAAPEVM--------------TIR-----YG--S--IGK---------GSRVVLIDDVLATGGTALSGLQLVEA-SDAVVVEMVSILSIPFL---------KAAEKI-HSTANSRYK-D-----IKFISLLSDDALTEE--NCGDSKNYTGPRVLSCGD
2 PsiBlast_PDB 50.7123%-112 - C1 -2WNS UMPS_HUMAN A:[12-150] ------------------------------------DVQAFKFGDFVLK----SGLS---SPIYIDLRGIVSRPRLLSQVADILFQTAQNA--GISFDTVCGVPYTALPLATVICSTN-------QI---------PMLI--RRKE---T---------------KD------------------Y--------------GTK-----RL-VEGTINP---------GETCLIIEDVVTSGSSVLETVEVLQK-EGLKVTDAIVLLDREQGGKDKLQAHGIRLHSV-C-------T-L-----SKMLEILEQQKKVDAETVGRVKRFIQE--------
48 HHSearch 50.6721%-117 - C1 -2DY0 - APT_ECOLI A:[24-182] --------------------------------------------------------P---GILFRDVTSLLEDPKAYALSIDLLVERYKN----AGITKVVGTEARGFLFGAPVALGL-------GV---------GFVP--VRKP---GKLPRETISETYDLEYGT------------------DQL------------EIH-----VD--A--IKP---------GDKVLVVDDLLATGGTIEATVKLIRR-LGGEVADAAFIINLFDL---------GGEQRL-E-------KQG-----ITSYSLVPFPGH-----------------------
43 HHSearch 50.1219%-108 - C1 -3QW4 - ? B:[261-433] -----------------------------ELAKALVDSHCVRFGNFTLK----SGKS---SPIYIDLRRLVTYPAIMRLVAREYAKVLRH----YKFDRIAGLPYAALPIASAISNEM-------NV---------PLIY--PRRE------------------------------------------------------AAI-----EG--E--YKK---------GDRVVIIDDLVST-ETKVEAIEKLRS-AGLEVVSIVVLVDRDMG----------AKAFL-N-------KLG-----YDFEAVVGLHQLLPLWRKSNAITSQQEADVRAFLG
33 HHSearch 50.1021%-103 - C1 -2WNS UMPS_HUMAN A:[4-180] ----------------------------GPLVTGLYDVQAFKFGDFVLK----SGLS---SPIYIDLRGIVSRPRLLSQVADILFQTAQNA--GISFDTVCGVPYTALPLATVICSTN-------QI---------PMLI--RRKETKDY---------------GT------------------K--------------RLV-----EG-T---INP---------GETCLIIEDVVTSGSSVLETVEVLQK-EGLKVTDAIVLLDREQG----------GKDKL-Q-------AHG-----IRLHSVCTLSKMLEILEQQKKVDAETVGRVKRFIQ
52 HHSearch 49.3721%-115 - C- -1VCH ? A:[22-162] ------------------------------------------------------------PGRRIPLVEFLGDPEFTRAAAEALRPLVP-----KEAEILFTTETSPIPLTHVLAEAL-------GL---------PYVV--ARRRRRPY---------------ME------------------DPIIQEVQTGEVL--WLD-----RRFAE--KLL---------NQRVVLVSDVVASGETMRAMEKMVLR-AGGHVVARLAVFRQGTPGLAVDTVAELPVL------------------------------------------------------
46 HHSearch 49.0317%-123 * C1 *1ZN8 APT_HUMAN A:[5-180] ------------------------------ELQLVEQ-RIRSFPDFPTP-----G------VVFRDISPVLKDPASFRAAIGLLARHLKATH-GGRIDYIAGLDSRGFLFGPSLAQEL-------GL---------GCVL--IRKRGKLP---------------GPTLWASYSLEYGKAE----L--------------EIQ-----KD-A---LEP---------GQRVVVVDDLLATGGTMNAACELLGR-LQAEVLECVSLVELTSL---------KGREKL-A---------P-----VPFFSLLQYE-------------------------
6 PsiBlast_PDB 48.9221%-124 - C1 -3QW4 - ? B:[275-410] -------------------------------------------GNFTLK----SGKS---SPIYIDLRRLVTYPAIMRLVAREYAKVLR----HYKFDRIAGLPYAALPIASAISNEM-------NV---------PLIY--PRRE--------------------------------------------------------------AA-IEGEYKK---------GDRVVIIDDLVST-ETKVEAIEKLRS-AGLEVVSIVVLVDRDMGAKAFLNKLGYDFEAV-V-------G-L-----HQLLPLWRKSNAITSQQEADVRAFLGQW-------
20 PsiBlast_PDB 48.8023% -93 - C1 -3MJD - ? A:[34-204] --------------------------------------QVLKFGEFTLK----SGRI---SPYFFNAGLFNTGAQLA-TLADYYAQLIIKS--DVKYDILFGPAYKGIPLVAAISTVL-------AL---------KY------NI---D---------------MP------------------Y--------------AFD-----RK--E-----GVFVGADMTNKKVLLIDDVMTAGTAFYESYNKLKI-INAKIAGVVLSIDRQ-EKAKDSDISATKKISQ-D-------F-N-----IPVLAVTNFESIFEYVKENLDETMIDKFKQYRQKY
45 HHSearch 48.6817% -97 - C1 -1Y0B XPT_BACSU A:[5-187] ----------------------------EALKRKIEEEGVV-LSDQVLK----VDSF---LNH-------QIDPLLMQRIGDEFASRFAK----DGITKIVTIESSGIAPAVMTGLKL-------GV---------PVVF--ARKHKSLT---------------LTDNLLTASVYSFT------K--------------QTESQIAVSG-TH--LSD---------QDHVLIIDDFLANGQAAHGLVSIVKQ-AGASIAGIGIVIEKSFQ---------PGRDEL-V-------KLG-----YRVESLARIQSLEEGKVSFVQE-------------
36 HHSearch 47.6319% -92 - C1 -3MJD - ? A:[24-213] ----------------------------AMFIEFALKNQVLKFGEFTLK----SGRI---SPYFFNAGLF-NTGAQLATLADYYAQLIIKS--DVKYDILFGPAYKGIPLVAAISTVLALKYNI-DM---------PYAF--DRKE------------------------------------------------------GVF-----VG-A---DMT---------NKKVLLIDDVMTAGTAFYESYNKLKI-INAKIAGVVLSIDRQEKAKD---SDISATKKI-SQ------DFN-----IPVLAVTNFESIFEYVKENLDETMIDKFKQYRQKY
39 HHSearch 47.5919% -88 - C1 -2PS1 PYRE_YEAST A:[10-209] ----------------------------KNFLELAIECQALRFGSFKLK----SGRE---SPYFFNLGLF-NTGKLLSNLATAYAIAIIQS--DLKFDVIFGPAYKGIPLAAIVCVKL-------AEIGGSKFQNIQYAF--NRKEAKDH---------------GE------------------G--------------GII-----VG-S---ALE---------NKRILIIDDVMTAGTAINEAFEIISN-AKGQVVGSIIALDRQEVVSTDDKEGLSATQTVSKK------Y-G-----IPVLSIVSLIHIITYLEGRITAEEKSKIEQYLQTY
7 PsiBlast_PDB 47.5125%-122 - C1 -2AEE PYRE_STRP1 A:[14-153] ----------------------------LDIKAVYLKP----EDPFTWA----SGIK---SPIYTDNRVTLSYPKTRDLIENGFVETIKAH--FPEVEVIAGTATAGIPHGAIIADKM-------TL---------PFAYIRSKPK------------------------------------------------------GNQ-----IE-GR--VLK---------GQKMVIIEDLISTGGSVLDAAAAASR-EGADVLGVVAIFTYELPKASQNFKEAGIKLIT-L-------S-N-----YTELIAVAKLQGYITNDGLHLLKKFKEDQVNWQ--