@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_1417: (2015-12-23 )
MDTNNNIEKEILALVKQNPKVSLIEYENYLSQLKYNPNASKSDIAFFYAPNKFLCTTITAKYGALLKEILSQNKVGMHLAHSVDVRIEVAPKIQVNAQSNINYKATKTSVKDSYTFENFVVGSCNNTVYEIAKKVAQSDTPPYNPVLFYGGTGLGKTHILNAIGNHALEKHKKVVLVTSEDFLTDFLKHLDNKNMDSFKKKYRHCDFFLLDDAQFLQGKPKLEEEFFHTFNELHANSKQIVLISDRSPKNIAGLEDRLKSRFEWGITAKVMPPDLETKLSIVKQKCQLNKITLPEEVMEYIAQHISDNIRQMEGAIIKISVNANLMNATIDLNLAKTVLEDLQKDHAEGSSLENILLAVAQSLNLKSSEIKVSSRQKNVALARKLVVYFARLYTPNPTLSLAQFLDLKDHSSISKMYSSVKKMLEEEKSPFILSLREEIKNRLNELNDKKTAFNSSE

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160......--.170.--..---......180.--......190.......-200--.-.-.-.....210.......220.......230.......240.......250.--......260.......270.......280.......290.......300.......310.......320.......330.......340.-......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MDTNNNIEKEILALVKQNPKVSLIEYENYLSQLKYNPNASKSDIAFFYAPNKFLCTTITAKYGALLKEILSQNKVGMHLAHSVDVRIEVAPKIQVNAQSNINYKATKTSVKDSYTFENFVVGSCNNTVYEIAKKVAQSDTPPYNPVLFYGGTGLGKTHILNAIGNHAL--EK--H--KK---VVLVTSEDFL--TDFLKHLDNKNMDSFK-KK---Y-R-H-CDFFLLDDAQFLQGKPKLEEEFFHTFNELHANSKQIVLISDRSPKNIAG--LEDRLKSRFEWGITAKVMPPDLETKLSIVKQKCQLNKITLPEEVMEYIAQHISDNIRQMEGAIIKISVNANLMNATIDLNLAKTVLEDLQ-KDHAEGSSLENILLAVAQSLNLKSSEIKVSSRQKNVALARKLVVYFARLYTPNPTLSLAQFLDLKDHSSISKMYSSVKKMLEEEKSPFILSLREEIKNRLNELNDKKTAFNSSE
42 HHSearch 96.4633%-101 - C2 -1L8Q DNAA_AQUAE A:[2-321] -----------------------------------------------------------------------------------------------------------DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEIEL-DNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKGFEG-LER-KE-------------RKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKK--R--KFKHLVGFLEKQAFDKIC---------
6 PsiBlast_PDB 92.4234% -98 - C2 -1L8Q DNAA_AQUAE A:[8-302] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSV----EEEKKRKFKHLVGFLEKQAFDKIC---------
26 PsiBlast_CBE 91.6334% -93 - C2 -3R8F DNAA_AQUAE D:[8-302] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSV----EEEKRKFKHLVGFLEKQAFDKIC----------
27 PsiBlast_CBE 90.9834% -92 - C2 -3R8F DNAA_AQUAE C:[8-302] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSV----EEEKRKFKHLVGFLEKQAFDKIC----------
25 PsiBlast_CBE 90.9634% -88 - C2 -2HCB DNAA_AQUAE B:[7-301] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAFK--DHTTVIHAIRSV----EEEKKRKFKHLVGFLEKQAFDKIC---------
28 PsiBlast_CBE 90.9434% -92 - C2 -3R8F DNAA_AQUAE B:[8-302] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSV----EEEKRKFKHLVGFLEKQAFDKIC----------
5 PsiBlast_PDB 90.8834% -92 - C2 -3R8F DNAA_AQUAE A:[8-302] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSV----EEEKRKFKHLVGFLEKQAFDKIC----------
23 PsiBlast_CBE 89.8334% -88 - C2 -2HCB DNAA_AQUAE D:[7-301] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSV----EEEKKRKFKHLVGFLEKQAFDKIC---------
4 PsiBlast_PDB 89.2634% -84 - C2 -2HCB DNAA_AQUAE A:[7-301] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKR--RTSEARKIAMYLCRKVCSASLIEIARAFK--DHTTVIHAIRSV----EEEKKRKFKHLVGFLEKQAFDKIC---------
24 PsiBlast_CBE 88.8634% -86 - C2 -2HCB DNAA_AQUAE C:[7-301] -----------------------------------------------------------------------------------------------------------------YTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAK--KR--G--YR---VIYSSADDFA--QAMVEHLKKGTINEFR-NM---Y-K-S-VDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDG--VSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLEN-TKNVREIEGKIKLIKLKG---------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDK-NKRTSEARKIAMYLCRKVCSASLIEIARAF---DHTTVIHAIRSV----EEEKKRKFKHLVGFLEKQAFDKIC---------
22 PsiBlast_CBE 86.8139% -94 - C2 -2Z4R DNAA_THEMA B:[96-335] -----------------------------------------------------------------------------------------------------------TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGR-YNPLFIYGGVGLGKTHLLQSIGNYVVQNEP--D--LR---VMYITSEKFL--NDLVDSMKEGKLNEFR-EK---Y-R-KKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKLSE--FQDRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLKDFI-KP----------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 86.7439% -93 - C2 -2Z4R DNAA_THEMA A:[96-335] -----------------------------------------------------------------------------------------------------------TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGR-YNPLFIYGGVGLGKTHLLQSIGNYVVQNEP--D--LR---VMYITSEKFL--NDLVDSMKEGKLNEFR-EK---Y-R-KKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKLSE--FQDRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLKDFI-KP----------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 86.7239% -94 - C2 -2Z4R DNAA_THEMA C:[96-335] -----------------------------------------------------------------------------------------------------------TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGR-YNPLFIYGGVGLGKTHLLQSIGNYVVQNEP--D--LR---VMYITSEKFL--NDLVDSMKEGKLNEFR-EK---Y-R-KKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKLSE--FQDRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLKDFI-KP----------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 84.8239% -93 - C2 -2Z4S DNAA_THEMA A:[96-335] -----------------------------------------------------------------------------------------------------------TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGR-YNPLFIYGGVGLGKTHLLQSIGNYVVQNEP--D--LR---VMYITSEKFL--NDLVDSMKEGKLNEFR-EK---Y-R-KKVDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKLSE--FQDRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLKDFI-KP----------------------------------------------------------------------------------------------------------------
41 HHSearch 81.7832% -92 - C2 -2Z4S DNAA_THEMA A:[96-335] -----------------------------------------------------------------------------------------------------------TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPG-RYNPLFIYGGVGLGKTHLLQSIGNYVV--QNEPD--LR---VMYITSEKFL--NDLVDSMKEGKLNEFR-EK---Y-RKK-VDILLIDDVQFLIGKTGVQTELFHTFNELHDSGKQIVICSDREPQKLSE--FQDRLVSRFQMGLVAKLEPPDEETRKSIARKMLEIEHGELPEEVLNFVAENVDDNLRRLRGAIIKLLVYKETTGKEVDLKEAILLLKDFI-KP----------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 62.1522% -77 - C2 -3SC3 ? A:[14-196] -----------------------------------------------------------------------------------------------------------------------YPAAGNDELIGALKSAASGDG--VQAIYLWGPVKSGRTHLIHAACARAN--EL--E--RRSFYIPLGIHASIS--TALLEGLEQ-------------------FDLICIDDVDAVAGHPLWEEAIFDLYNRVAEQKRGSLIVSASASPMEAGFVLPD-LVSRMHWGLTYQLQPMMDDEKLAALQRRAAMRGLQLPEDVGRFLLNRMARDLRTLFDVLDRLDKASMVHQRKLTIPFVKEMLRL---------------------------------------------------------------------------------------------------------------------
36 Fugue 61.8896% -89 - C1 -2WP0 - DNAA_HELPY C:[6-91] -----NIEKEILALVKQNPKVSLIEYENYFSQLKYNPNASKSDIAFFYAPNQVLCTTITAKYGALLKEILSQNK-GMHLAHSVDVRIEVAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 61.6995% -89 - C1 -2WP0 - DNAA_HELPY C:[6-91] -----NIEKEILALVKQNPKVSLIEYENYFSQLKYNPNASKSDIAFFYAPNQVLCTTITAKYGALLKEILSQNK-GMHLAHSVDVRIEVAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49 HHSearch 60.0514% -91 - C2 -1IQP RFCS_PYRFU A:[23-241] ------------------------------------------------------------------------------------------------------------------RLDDIV---GQEHIVKRLKHYVKTG--SMPHLLFAGPPGVGKTTAALALARELF--GENWR--HN---FLELNASDER--G--INVIRE-KVKEFA-RTKPIGGA-S-FKIIFLDEADALT--QDAQQALRRTMEMFS-SNVRFILSCNYSS----K--IIEPIQSRCA---IFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDK----KITDENVFMVASRAR-PEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK----------------------
59 HHSearch 59.7213% -91 * C2 *1SXJ RFC4_YEAST B:[19-230] ------------------------------------------------------------------------------------------------------------------VLSDIV---GNKETIDRLQQIAKDG--NMPHMIISGMPGIGKTTSVHCLAHELL--GR--SYADG---VLELNASDDRGIDVVRNQIKH-FAQKKLHLP---P-G-K-HKIVILDEADSMTA--GAQQALRRTMELYSN-STRFAFACNQS----NK--IIEPLQSQCA---ILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHG----LVNADNVFKIVDSPH-PLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVGTYLQLASMLAKIHKLNNK------------------------