@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_1464: (2015-12-24 )
MDNKNIDPCFNPEQFLETQKYKGVVTALIFLLLFFIFLMVAFKKAFFAQANMPTLVMIKQDTATRGTIYSQDNYSLATSQTLFKLGFDTRFLNPNKEDFFIDFLSIYSNIPKESLKDALNTKGYTILAYNLTPNMAANIRDLNKKFLAFGVFQNFKDAHDKVWQKQGLNIEVSGVSRHYPYQNSLEPIIGYVQKQEEDKLTLTTGKKGVEKSQNNLLEAQQNGIRSGKRDVSFNFIQNHSYTEVERLDGYEVYLSVPLKLQREIETLLDKTKDKLRAKEILVGIINPKSGEILSLASSNRFDPNAIKTSDYENLNLSVAEKVFEPGSTIKPIVYSLLLDKNLINPKERIDLNHGYYQLGKYTIKDDFIPSKKAVVEDVLIQSSNVGMIKISKSLNPEDFYNGLLGYGFSQKTGIDLSLEATGKIPPLSAFKREVLKGSVSYGYGLNATFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGDIYIPSPKPTFQVISPKSARKMKETLIKVVRYGTGKNAQFEGLYIGGKTGTARVAKNGSYSAESYNSSFFGFAEDERQVFTIGVVILGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPSIAIQNALEKNRLK

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........---80........90..-.-.....100.......110.......---120-------------------------------------------------------------------.......----------------.130.......140-........150.......160.......170.......180.......190...-.-.-.--------------.200.......210.......220.......230......-.240........250.......260---......----..270....-------...280.......290.......300----.....-..310-------------.........320.......330.......340.......350.---......360.....------..----.-----.370.-----........380.......390..-----------.-----------------.-------.---..400.......410--........420.......430.......440..-...-------..450.......460.......470.......480---..-..-..----...-490-........500......-.510--------.-..----------..-.-.-..520.......530..--.--..--..--.540.........550-..--......560...--....570.......580.......590.......600.......610.-----------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MDNKNIDPCFNPEQFLETQKYKGVVTALIFLLLFFIFLMVAFKKAFFAQANMPTLVMIKQDTATRGTIYSQDNYSLATS---QTLFKLGFDTRFLN-P-NKEDFFIDFLSIYSNIPKESLKDAL---NT--------------------------------------------------------------------KGYTILA----------------YNLTPNMAANIRD--LNKKFLAFGVFQNFKDAHDKVWQKQGLNIEVSGVSRHYPYQNSLEPIIGYVQKQ-E-E-D--------------KLTLTTGKKGVEKSQNNLLEAQQNGIRSGKRDVSFNFIQN-HS-YTEVERLDGYEVYLSVPLKLQ----REIETL----LDKTKDKLR-------AKEILVGIINPKSGEILSLASSNRFD----PNAIK-TSD---------------YENLNLSVAEKVFEPGSTIKPIVYSLLLDKNLINPKERIDLNH---GYYQLGK--YTIKD------DF----I-----PS--K-----KAVVEDVLIQSSNVGMIKISKSL-----------N-----------------P-------E---DFYNGLLGYGFSQK---TGIDLSLEATGKIPPLSAFKREVLKGSVSYGYG-LNA-------TFLQLLRAYAVFSNEGKLTTPYLVQRETAPNGD-----IY-IP-SP----KPT-F-Q-VISPKSARKMKETLIKV-VR----------Y-GT----------GK-N-A-QFEGLYIGGKTGTA-RV--A--KN--GS--YS--AESYNSSFFGF--AE--DERQVFTIGVVI--LGSHGKEEYYASKIAAPIFKEITEILVRYNYLSPSIAIQNALEKNRLK-----------------------------------------------------------------------------------------------------------------
56 Fugue 88.8628% -57 - C1 -3OC2 ? A:[35-545] ----------------------------------------------------ARSVRHIAIPAHRGLITDRNGEPLAVS---TPVTTLWANPKELM-T-AKERW--PQLAAALGQDTKLFADRIEQNAE--------------------------------------------------------------------REFIYLV----------------RGLTPEQGEGVIA--LKVP---------------------GVYSIEE-FRRFYPAGEVVAHAVGFTDVD-D-R----------------------GREGIELAFDEWLA-GVPGKRQVLKDRRGRVIKD-VQ-VTKNAK-PGKTLALSIDLRLQ----YLAHRE----LRNALLENG-------AKAGSLVIMDVKTGEILAMTNQPTYN----PNNRR-NLQ---------------PAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYP---GTLQIGR--YTIRD------VS----R-----NS--R-----QLDLTGILIKSSNVGISKIAFDI-----------G-----------------A-------E---SIYSVMQQVGLGQD---TGLGFPGERVGNLPNHRKW-PKAETATLAYGYG-LSV-------TAIQLAHAYAALANDGKSVPLSMTRVDRVPDG----------------------V-Q-VISPEVASTVQGMLQQV-VE----------AQGG----------VF-R-A-QVPGYHAAGKSGTA-R-------------------KAYRSLFAGF--AP--ATDPRIAMVVVI--DEP------FGGLVSAPVFSKVMAGALRLMNVPPDNL----------------------------------------------------------------------------------------------------------------------------
58 Fugue 86.7723% -46 - C1 -1QME PBPX_STRPN A:[23-702] --------------------------------------TVPAKRGTIYDRNGVPIAEDAT---------SP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRSYPNGQFASSFIGLAQLHEN-E-D--------------GSKSLLGTSGMESSLNSILAGTDG------------------------RTMDGKDVYTTISSPLQ----SFMETQ----MDAFQEKVK-------GKYMTATLVSAKTGEILATTQRPTFD----ADTKEGITE---------------DFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGE--VFNS---SELKIAD--ATIRD------WD----V-----NE--GLTGGRMMTFSQGFAHSSNVGMTLLEQKM-----------G-----------------D-------A---TWLDYLNRFKFGVP---TRFGLTDEYAGQLPA----DNIVNIAQSSFGQG-ISV-------TQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQ-----TA-RK-SQ----KEI-VGN-PVSKDAASLTRTNMVLV-GT----------D-PVYGTMYNHSTGKP-T-V-TVPGQNVALKSGTA-QIADE--KN--GG--YLVGLTDYIFSAVSM--SP--AENPDFILYVTV--QQPEHYSGIQLGEFANPILERASAMKDSLN-----------LQQSPYPMPSVKDISPGDLAEELRRNLVQPIVVGTGTKIKNSSAEEGKNLAPNQQVLILSDKAEEVPDMYGWTKETAETLAKWLNIELEFQGSGSTVQKQDVRANTAIKDIKKITLTLGD
33 HHSearch 85.0625% -50 * C1 *3EQU PBP2_NEIGO A:[24-534] ---------------------------------------------------NRIVR-TQALPATRGTVSDRNGAVLALS---APTE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKRHYPMGNLFAHVIGFTDI----D-G-------------------KGQEGLELSLEDSLYG-EDGAEVVLRDRQGNIVDS-LDSPRNKAPQNGKDIILSLDQRIQ----TLAYEE----LNKAVEYHQ-------AKAGTVVVLDARTGEILALANTPAYD----PNRPG-RAD---------------SEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNTQ-----PYKIGP--SPVRD------T-----H-----VY--P-----SLDVRGIMQKSSNVGTSKLSARF-----------G-----------------A-------E---EMYDFYHELGIGVR---MHSGFPGETAGLLRNWRRW-RPIEQATMSFGYG-LQL-------SLLQLARAYTALTHDGVLLPLSFEKQAVAPQG----------------------K-R-IFKESTAREVRNLMVSV-TEP---------G-GT----------GT-A-G-AVDGFDVGAKTGTA----------------------KHVATFIGF--AP--AKNPRVIVAVTI--DEPTA-HGYYGGVVAGPPFKKIMGGSLNILGISPTKPLT--------------------------------------------------------------------------------------------------------------------------
59 Fugue 84.5122% -42 - C1 -1QME PBPX_STRPN A:[23-702] -----------------------------------------------------------------------------------------------------------------TVPAKRGT-IY---DR--------------------------------------------------------------------NGVPIAE----------------DATSP--------------------------------------------NRSYPNGQFASSFIGLAQLHEN-E-D--------------GSKSLLGTSGMESSLNSILAGTDGRTMDGK------------------------DVYTTISSPLQ----SFMETQ----MDAFQEKVK-------GKYMTATLVSAKTGEILATTQRPTFD----ADTKEGITE---------------DFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFN--S---SELKIAD--ATIRD------WD----V-----NE--GLTGGRMMTFSQGFAHSSNVGMTLLEQKM-----------G-----------------D-------A---TWLDYLNRFKFGVP---TRFGLTDEYAGQLPA----DNIVNIAQSSFGQG-ISV-------TQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQ-----TA-RK-SQ----KEI-VGN-PVSKDAASLTRTNMVLV-GTDPVYGTMYNHS-TG----------KP-T-V-TVPGQNVALKSGTA-QIADE--KN--GG--YLVGLTDYIFSAVSM--SP--AENPDFILYVTV--QQPEHYSGIQLGEFANPILERASAMKDSLNLQQSPYPMPSVKDISPGDLAEELRRNLVQPIVVGTGTKIKNSSAEEGKNLAPNQQVLILSDKAEEVPDMYGWTKETAETLAKWLNIELEFQGSGSTVQKQDVRANTAIKDIKKITLTLGD-----------
36 HHSearch 83.0922% -49 - C1 -1QME PBPX_STRPN A:[23-566] -----------------------------------------------------------TVPAKRGTIYDRNGVPIAED---AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SPNRSYPNGQFASSFIGLAQLH-E-N-ED-------------GSKSLLGTSGMESSLNSILAG-TDG-----------------------RTMDGKDVYTTISSPLQ----SFMETQ----MDAFQEKVK-------GKYMTATLVSAKTGEILATTQRPTFD----ADTKE-GITE--------------DFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNS-----SELKIAD--ATIRD------WD----VNEGLTGG--R-----MMTFSQGFAHSSNVGMTLLEQKM-----------G-----------------D-------A---TWLDYLNRFKFGVP---TRFGLTDEYAGQLPAD----NIVNIAQSSFGQG-ISV-------TQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQ-----TA-RKSQK----EIV-G-N-PVSKDAASLTRTNMVLV-GTDPV-------Y-GTMYNHST----GK-PTV-TVPGQNVALKSGTA-QI--A--DEKNGG--YLVGLTDYIFSAVSM--SP--AENPDFILYVTV--QQPEH----YSGIQLGEFANPILERASAMKDSLNLQQSPYPMPSVKDI-----------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 83.0227% -46 - C1 -3EQU PBP2_NEIGO A:[26-517] ------------------------------------------------------IVRTQALPATRGTVSDRNGAVLALSAPTE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKRHYPMGNLFAHVIGFTDID-G-K----------------------GQEGLELSLEDSLYGE-DGAEVVLRDRQGNIVDSLDS-PRNKAPQNGKDIILSLDQRIQ----TLAYEE----LNKAVEYHQ-------AKAGTVVVLDARTGEILALANTPAYD----PNRPG-RAD---------------SEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNER--LNT---QPYKIGP--SPVRD------TH----VY----PS--L-----D--VRGIMQKSSNVGTSKLSARF-----------G-----------------A-------EEMYDFYH-ELGIGVRMH---SG--FPGETAGLLRNWRRW-RPIEQATMSFGYG-LQL-------SLLQLARAYTALTHDGVLLPLSFEKQAVAPQGK-----------------------R-IFKESTAREVRNLMVSV-TEP---------G-GT----------GT-A-G-AVDGFDVGAKTGTA----------------------KHVATFIGFAPAK--NPRVIVAVTIDE--PTAHG---YYGGVVAGPPFKKIMGGSLNILGISPTKPLT--------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 80.1326% -69 - C1 -4BJP ? A:[101-499] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYYPSGEVTAHLIGFTNVD-S-Q----------------------GIEGVEKSFDKWLT--------------------------------AHNLALSIDERLQ----ALVYRE----LNNAVAFNK-------AESGSAVLVDVNTGEVLAMANSPSYN----PNNLS-GTP---------------KEAMRNRTITDVFEPGSTVKPMVVMTALQRGVV--RENSVLNT---IPYRING--HEIK-------DV----A-----RY--S-----ELTLTGVLQKSSNVGVSKLALAM-----------P-----------------S-------S---ALVDTYSRFGLGKA---TNLGLVGERSGLYPQKQRWS-DIERATFSFGYG-LMV-------TPLQLARVYATIGSYG-IYRPLSITK---------------VD-PP----VPG-E-R-VFPESIVRTVVHMMESVALP----------G-GG----------GV-K-A-AIKGYRIAIKTGTAKKV--G--PD--GR--Y---INKYIAYTAGV--AP--ASQPRFAL-VVV--INDPQA-------VSAPVFGAIMGGVLRTMNIEPDA-----------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 78.8728% -54 - C1 -4KQR ? A:[138-542] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFYPAGEVVAHAVGFTDVD-D-R----------------------GREGIELAFDEWL-AGVPGKRQVLKDRRGRVIKD-VQ-VTKNAK-PGKTLALSIDLRLQYLAHRELRNA----L--LENGAK-------AGSLV--IMDVKTGEILAMTNQPTYN----PNNRR-NLQ---------------PAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYP---GTLQIGR--YTIRD------VS----R-----NS--R-----QLDLTGILIKSSNVGISKIAFDI-----------G-----------------A-------E---SIYSVMQQVGLGQD---TGLGFPGERVGNLPNHRKWPK-AETATLAYGYG-LSV-------TAIQLAHAYAALANDGKSVPLSMTRVDRVPDG----------------------V-Q-VISPEVASTVQGMLQQV-VE----------A-QG----------GVFR-A-QVPGYHAAGKSGTA-RK--V--SV--GTKGYR--ENAYRSLFAGF--APATDPRIAM---VVV--IDEPSKAGYFGGLVSAPVFSKVMAGALRLMNVPPDNLPTATEQQQVN------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 78.3128% -54 - C1 -4KQO ? A:[138-542] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFYPAGEVVAHAVGFTDVD-D-R----------------------GREGIELAFDEWL-AGVPGKRQVLKDRRGRVIKD-VQ-VTKNAK-PGKTLALSIDLRLQYLAHRELRNA----L--LENGAK-------AGSLV--IMDVKTGEILAMTNQPTYN----PNNRR-NLQ---------------PAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYP---GTLQIGR--YTIRD------VS----R-----NS--R-----QLDLTGILIKSSNVGISKIAFDI-----------G-----------------A-------E---SIYSVMQQVGLGQD---TGLGFPGERVGNLPNHRKWPK-AETATLAYGYG-LSV-------TAIQLAHAYAALANDGKSVPLSMTRVDRVPDG----------------------V-Q-VISPEVASTVQGMLQQV-VE----------A-QG----------GVFR-A-QVPGYHAAGKSGTA-RK--V--SV--GTKGYR--ENAYRSLFAGF--APATDPRIAM---VVV--IDEPSKAGYFGGLVSAPVFSKVMAGALRLMNVPPDNLPT--------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 77.9628% -55 - C1 -4KQQ ? A:[138-542] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFYPAGEVVAHAVGFTDVD-D-R----------------------GREGIELAFDEWL-AGVPGKRQVLKDRRGRVIKD-VQ-VTKNAK-PGKTLALSIDLRLQYLAHRELRNA----L--LENGAK-------AGSLV--IMDVKTGEILAMTNQPTYN----PNNRR-NLQ---------------PAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYP---GTLQIGR--YTIRD------VS----R-----NS--R-----QLDLTGILIKSSNVGISKIAFDI-----------G-----------------A-------E---SIYSVMQQVGLGQD---TGLGFPGERVGNLPNHRKWPK-AETATLAYGYG-LSV-------TAIQLAHAYAALANDGKSVPLSMTRVDRVPDG----------------------V-Q-VISPEVASTVQGMLQQV-VE----------A-QG----------GVFR-A-QVPGYHAAGKSGTA-RK--V--SV--GTKGYR--ENAYRSLFAGF--APATDPRIAM---VVV--IDEPSKAGYFGGLVSAPVFSKVMAGALRLMNVPPDNLPTATEQQQVN------------------------------------------------------------------------------------------------------------------
61 Fugue 77.6922% -43 - C1 -1K25 - ? A:[67-750] ----------------------------------QITRTVPAKRGTIYDRNGVPIAEDATSYNVYAVTTSP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NRSYPNGQFASSFIGLAQLH-ENE-D--------------GSKSLLGTSGMESSLNSILAGTDGIITYGNI------VPG-TE-LVSQQTVDGKDVYTTLSSPLQ----SFMETQ----MDAFLEKVK-------GKYMTATLVSAKTGEILATTQRPTFN----ADTKEGITE---------------DFVWRDILYQSNYEPGSAMKVMTLASSIDNNTFPSGEYFNSSE------------------------------------------------------LSSNVGMSLLEQKM-----------G-----------------D-------A---TWLDYLKRFKFGVP---TRFGLTDEYAGQLPA----DNIVSIAQSSFGQG-ISV-------TQTQMLRAFTAIANDGVMLEPKFISAIYDTNNQ-----SV-RK-SQ----KEI-VGN-PVSKEAASTTRNHMILV-G-------------TD----------PL-I-I-TVPGQNVAVKSGTA-QI--ADEKN--GG--YLVGSTNYIFSAVTM--NP--AENPDFILYVTV--QQPEHYSGIQLGEFATPILERASAMKESLNLQSPAKNLDKVTTESSYAMPSIKDISPGELAEALRRNIVQPIVVGTGTKIKETSVEEGTNLAPNQQVLLLSDKVEEIPDMYGWKKETAETFAKWLDIELEFEGSGSVVQKQDVRTNTAIKNIKKIKLTLGD
1 PsiBlast_PDB 77.1828% -55 - C1 -3OCN ? A:[138-542] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFYPAGEVVAHAVGFTDVD-D-R----------------------GREGIELAFDEWL-AGVPGKRQVLKDRRGRVIKD-VQ-VTKNAK-PGKTLALSIDLRLQYLAHRELRNA----L--LENGAK-------AGSLV--IMDVKTGEILAMTNQPTYN----PNNRR-NLQ---------------PAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSDIVDVYP---GTLQIGR--YTIRD------VS----R-----NS--R-----QLDLTGILIKSSNVGISKIAFDI-----------G-----------------A-------E---SIYSVMQQVGLGQD---TGLGFPGERVGNLPNHRKWPK-AETATLAYGYG-LSV-------TAIQLAHAYAALANDGKSVPLSMTRVDRVPDG----------------------V-Q-VISPEVASTVQGMLQQV-VE----------A-QG----------GVFR-A-QVPGYHAAGKSGTA-RK--V--------------ENAYRSLFAGF--APATDPRIAM---VVV--IDEPSKAGYFGGLVSAPVFSKVMAGALRLMNVPPDNL----------------------------------------------------------------------------------------------------------------------------
34 HHSearch 72.8121% -41 - C1 -3VSK - ? A:[57-678] ---------------------------------------------------NDENI-TVNESVPRGRILDRNGKVLVDN---ASKMAITYTRGRKT-TQSEMLDTAEKLSKLIKMDTKKITERD---KKDFWIQLHPKKAKAMMTKEQAMLADGSIKQDQYDKQLLSKIRKSQLDELSSKDLQVLAIFREMNAGTVLDPQMIKN----------------EDVSEKEYAAVSQQLSKLP---------------------GVNT-SMDWDRKYPYGDTLRGIFGDVSTP-A-E-GIPKELTEHYLSKGYSRNDRVGKSYLEYQYEDVLRG-KKKEMKYTTDKSGKVTSS-EV---LNPGARGQDLKLTIDIDLQ----KEVEAL----LDKQIKKLRSQGAKD-MDNAMMVVQNPKNGDILALAGKQINK----SGKM---------------------TDYDIGTFTSQFAVGSSVKGGTLLAGYQNKAIKVGETMVDEP---LHFQ-GG--LTKRS------YFNK--N-----GH--V-----SINDKQALMHSSNVYMFKTALKL-----------AGDPYYSGMALPSDISSPA-------Q---KLRRGLNQVGLGVK---TGIDLPNETRGQIEPL-TN-NPGNYLDLSIGQY-DTY-------TPLQLSQYVSTIANDGYRIQPHIGLTIHESTNKD----EV-GPLKKKINGTVL-N-KVNNTEKEIKQIQEGFKMA-FNDK--------D-GT----------GY-V-SFKDTVVPTAGKTGTA-EV--F--Q-----------EPRVNSTYIGY--AP--IDDPKLAFSIVY--TNQPV-P--PPWLTGGDLGRDVINYYFK-------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 71.4518% -48 - C1 -3UN7 - PBPA_MYCTU A:[73-488] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFLRVYPNPEVYAPVTGFYSLR-------------------------YSSTALERAEDPILNG-SDRRLF------GRRLAD-FF---TGRDPRGGNVDTTINPRIQ----QAGWDA----MQQGC--YG-------PCKGAVVALEPSTGKILALVSSPSYD----PNLLA-SHNPEVQAQAWQRLGDNPASPLTNRAISETYPPGSTFKVITTAAALAAGATETE-QLTAA----PTIPLPGSTAQLEN------YGGAPCG-----DE--P-----TVSLREAFVKSCNTAFVQLGIRT-----------G-----------------A-------D---ALRSMARAFGLDSPPRPTPLQVAESTVGPIPD------SAALGMTSIGQKDVAL-------TPLANAEIAATIANGGITMRPYLVGSLKGPDLA-----NI-STTVR----YQQ-R-R-AVSPQVAAKLTELMVGA-EK----------V-------------Q--K-G-AIPGVQIASKTGTA-EH--G--TD------PR--HTPPHAWYIAF--AP--AQAPKVAVAVLV--ENGADRLSATGGALAAPIGRAVIEAALQ-------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 70.8930% -50 - C1 -4U3T - PBP2_NEIGO A:[6-312] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSLD----QRIQTLAYEELNKAVEYHQ-------AKAGTVVVLDARTGEILALANT---------------------------------PGRNRAVTDMI-EPGSAIKPFVIAKALDAGKTDLNER--LNT---QPYKIGP--SPVRD------DT----H-----VY--P-----SLDVRGIMQKSSNVGTSKLSARF-----------G-----------------A-------EEMYDFYH-ELGIGVRMH---SG--FPGETAGLLRNWRRW-RPIEQATMSFGYG-LQL-------SLLQLARAYTALTHDGVLLPLSFEKQAVAPQGK-----------------------R-IFKESTAREVRNLMVSV-TEP---------G-GT----------GT-A-G-AVDGFDVGAKTGTA-RK--L--VN--GR--YV--DNKHVGTFIGF--AP--AKNPRVIVAVTIDEPTAHG-------VVAGSPFKKIMGGSLNILGISPTKPLTA-------------------------------------------------------------------------------------------------------------------------
35 HHSearch 70.4619% -51 - C1 -2WAD PBP2_STRR6 A:[50-676] -----------------------------------------------------SQT-KVTTSSARGEIYDASGKPLVEN---TLKQVVSFTRSNKMTA-TDLKEIAKKLLTYVSISSPNLTERQ---LADYYLADPEIYKKTVEALPESELYNNAVDSVPTSQLNYTEDE---------------------------KKEIYLFSQLNAVGNFATGTIATDPLNDSQVAVIAS--I-------------------SKEMPGISI-STSWDRKILE-TSLSSIVGSVSSE-K-AGLPAEEAESYLKKGY-SLNDRVGTSYLEKQYEEVLQG-KRPVKEIHLDKHGDMESV-EN---IEEGSKGKNIKLTIDLAFQ----DSVDAL----LKSYFNSELGNGGAKYSEGVYAVALNPQTGAVLSMSGLK-HD----LKTGE-------------------LTPDSLGTVTNVFVPGSVVKAATISSGWENGVLSGNQTLTDQ----P-IVFQGS-APIYS------WY----KL----AYGSF-----PITAVEALEYSSNAYVVQTALGIMGQTYQPNMFVG-----------------TSNLESAMG---KLRSTFGEYGLGSA---TGIDLPDESTGLVPK--EY-NFANFITNAFGQF-DNY-------TPMQLAQYVATIANNGVRLAPHIVEGIYDNNDKGGLGELI-QAIDT----KEINK-V-NISESDMAILHQGFYQV-SH------------GTSPLTT-----GR-A-FSDGATVSISGKTGT-------------------------NTNAVAY--AP--TENPQIAVAVVF--PHNTN----LTKNVGPAIARDIINLYNQHHPMN--------------------------------------------------------------------------------------------------------------------------------
15 PsiBlast_PDB 69.8423% -36 - C1 -4N1X ? A:[70-465] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNYPHDGMASHTVGYISTQ-Y------------------------GTAGIESSMNETLT--------DWRSALYSMAGI-NT--------TGSSVVLTINSQMQ----AVAEAA----LQGYSGSIV--------------VMDPSTGAVLAKASSPSYTHAELGT-----------------------SQLVDRTTQALYSPGSSFKTVTLAAGIDTH----KTTLDTTYSAPGTMEIGG--GTIHNYANEDMGT----I-----PL--R-----EA-----FARSSNTALAQLGVAL-----------G-----------------A-------D---NLVSYARAFGYGTA---LGQDFSTTPSLMPNPAEMTTWELAWASCGLPVG-EHASPAGPQTTVMQNAVIAAAIANGGVVMNPYIVDRVLSPEGA-----VVSTT-SP----KSL-G-Q-AVSADTAAQVREAMLGV-VE----------S-GT----------GM-G-A-RVPGVKIAGKTGTA-DV-----EN--G---------NFNSFFIGF--AP--YDHPTLVVSVVI--EGNGENVLGYGAQVGGRVLAQCLNIQA--------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 68.3223% -37 - C1 -4R3J ? A:[80-475] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNYPHDGMASHTVGYISTQ-Y------------------------GTAGIESSMNETLTG------------------------------TGSSVVLTINSQMQ----AVAEAA----LQGYSGSIV--------------VMDPSTGAVLAKASSPSYTHAELGTIIE-SGT---------------GSQLVDRTTQALYSPGSSFKTVTLAAGIDTH----KTTLDTTYSAPGTMEIGG--GTIHNYANEDMGT----I-----PL--R-----EA-----FARSSNTALAQLGVAL-----------G-----------------A-------D---NLVSYARAFGYGTA---LGQDFSTTPSLMPNPAEMTTWELAWASCGLPVG-EHASPAGPQTTVMQNAVIAAAIANGGVVMNPYIVDRVLSPEGA-----VVSTT-SP----KSL-G-Q-AVSADTAAQVREAMLGV-VE----------S-GT----------GM-G-A-RVPGVKIAGKTGTA-D-------N--G---------NFNSFFIGF--AP--YDHPTLVVSVVI--EGNGENVLGYGAQVGGRVLAQCLNIQALGAAS---------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 68.0523% -36 - C1 -4R23 ? A:[80-475] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNYPHDGMASHTVGYISTQ-Y------------------------GTAGIESSMNETLTGH--------RSALYSMAGI--T--------TGSSVVLTINSQMQ----AVAEAA----LQGYSGSIV--------------VMDPSTGAVLAKASSPSYTHAELGTI----------------------SQLVDRTTQALYSPGSSFKTVTLAAGIDTH----KTTLDTTYSAPGTMEIGG--GTIHNYANEDMGT----I-----PL--R-----EA-----FARSSNTALAQLGVAL-----------G-----------------A-------D---NLVSYARAFGYGTA---LGQDFSTTPSLMPNPAEMTTWELAWASCGLPVG-EHASPAGPQTTVMQNAVIAAAIANGGVVMNPYIVDRVLSPEGA-----VVSTT-SP----KSL-G-Q-AVSADTAAQVREAMLGV-VE----------S-GT----------GM-G-A-RVPGVKIAGKTGTA-DV-----EN--G---------NFNSFFIGF--AP--YDHPTLVVSVVI--EGNGENVLGYGAQVGGRVLAQCLNIQAL-------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 67.8523% -36 - C1 -4JBF - ? A:[80-475] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RNYPHDGMASHTVGYISTQ-Y------------------------GTAGIESSMNETLT--------DWRSALYSMAGI-NT--------TGSSVVLTINSQMQ----AVAEAA----LQGYSGSIV--------------VMDPSTGAVLAKASSPSYTHAELGT-----------------------SQLVDRTTQALYSPGSSFKTVTLAAGIDTH----KTTLDTTYSAPGTMEIGG--GTIHNYANEDMGT----I-----PL--R-----EA-----FARSSNTALAQLGVAL-----------G-----------------A-------D---NLVSYARAFGYGTA---LGQDFSTTPSLMPNPAEMTTWELAWASCGLPVG-EHASPAGPQTTVMQNAVIAAAIANGGVVMNPYIVDRVLSPE-A-----VVSTT-SP----KSL-G-Q-AVSADTAAQVREAMLGV-VE----------S-GT----------GM-G-A-RVPGVKIAGKTGTA-DV------N--G---------NFNSFFIGF--AP--YDHPTLVVSVVI--EGNG-NVLGYGAQVGGRVLAQCLNIQAL-------------------------------------------------------------------------------------------------------------------------------------