@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0003: (2016-03-11 )
MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVSVDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDYDRLKDVIATATYAVVFSAIILTVAGVLLAKPLLILLRTPANILDDSTIFLTTLFIGILPMSLYNGMAAILRALGNSITPLIFLILSSLMNIALDFLFVVYMDMGVRGAAIATVLSQTAAAIAVIYYAYRHVPFMRIERAKFKLSTPLLKEMVRIGLPSGLQGSFISIGNMALQSLINGFGSSVVAAYTAASRIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGITILVQLFARQFLLLFVDSSETEVINIGVSYLLIVSLFYVVVGILFVVRETLRGTGDAMVPLAMGIFELVSRLVIGFVLSLYIGYVGLWWATPVAWITATILGVWRYKSGAWQKKAVIRRK

Atome Classification :

(20 SA) ---.........10........20........30........40........50........60........70........80........-90........100.......110.......120.---......--130.-......140-....--...150.......160.-......170---.......180...----.....190.......200-.......210-..-.....--.220.......230--........240.....-..250.......260...-....-.270.......280.......290.......300.......310.......320.....--..330.......340.......350...-.....360.......370.......380.......390..-.-...-.400...-...--.-------.410.......420.......-430........440.....---
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVSVDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDYDRLK-DVIATATYAVVFSAIILTVAGVLLAKPLLILLRT---PANILD--DSTI-FLTTLFIGI-LPMS--LYNGMAAILRALGNSIT-PLIFLILSS---LMNIALDFL-FVV----YMDMGVRGAAIATVLSQT-AAAIAVIYY--AY-RHVPF--MRIERAKFKLSTP---LLKEMVRIGLPSGLQG-SFISIGNMALQSL-INGF-GSSV-VAAYTAASRIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGI--TILVQLFARQFLLLFVDSSETEVI-NIG-VSYLLIVSLFYVVVGILFVVRETLRGTGDAMVPLAMGIFE-L-VSR-LV-IGFV-LSL--Y-------IGYVGLWWATPVAWITATILG-VW-RYKSGAWQKKAVIRRK---
7 PsiBlast_PDB 96.2926%-129 - C2 -4MLB ? A:[21-462] ----------GDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGAD-NV---AVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVE--LAIE-YARVLLAGA-FIIV--FNNVGNGILRGEGDANR-AMLAMVLGS---GLNIVLDPI-FIY----TLGFGVVGAAYATLLSMV-VTSLFIAYW--LFVKRDTY--VDITLRDFSPSRE---ILKDILRVGLPSSLSQ-LSMSIAMFFLNSVAITAG-GENG-VAVFTSAWRITMLGIVPILGMATATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAV--VAFIMLFAPQVAYLFTYSESAQVI-KGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTL-VMQ-VG-FAYI-FVH--YTT-----LGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKTS--------
6 PsiBlast_PDB 95.9926%-130 - C2 -3WBN ? A:[14-454] ----------GDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGAD-NV---AVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVE--LAIE-YARVLLAGA-FIIV--FNNVGNGILRGEGDANR-AMLAMVLGS---GLNIVLDPI-FIY----TLGFGVVGAAYATLLSMV-VTSLFIAYW--LFVKRDTY--VDITLRDFSPSRE---ILKDILRVGLPSSLSQ-LSMSIAMFFLNSVAITAG-GENG-VAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAV--VAFIMLFAPQVAYLFTYSESAQVI-KGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTL-VMQ-VG-FAYI-FVH--YTT-----LGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKT---------
8 PsiBlast_PDB 95.6526%-134 - C2 -3W4T ? A:[14-454] ----------GDPKKAIVRLSIAMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGAD-NV---AVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVE--LAIE-YARVLLAGA-FIIV--FNNVGNGILRGEGDANR-AMLAMVLGS---GLNIVLDPI-FIY----TLGFGVVGAAYATLLSMV-VTSLFIAYW--LFVKRDTY--VDITLRDFSPSRE---ILKDILRVGLPSSLSQ-LSMSIAMFFLNSVAITAG-GENG-VAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAV--VAFIMLFAPQVAYLFTY-----VI-KGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTL-VMQ-VG-FAYI-FVH--YTT-----LGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKT---------
2 PsiBlast_PDB 94.9326%-131 - C2 -3VVO ? A:[14-455] ----------GDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGAD-NV---AVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVE--LAIE-YARVLLAGA-FIIV--FNNVGNGILRGEGDANR-AMLAMVLGS---GLNIVLDPI-FIY----TLGFGVVGAAYATLLSMV-VTSLFIAYW--LFVKRDTY--VDITLRDFSPSRE---ILKDILRVGLPSSLSQ-LSMSIAMFFLNSVAITAG-GENG-VAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAV--VAFIMLFAPQVAYLFTY------I-KGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTL-VMQ-VG-FAYI-FVH--YTT-----LGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKTS--------
5 PsiBlast_PDB 94.8526%-131 - C2 -3VVS ? A:[14-454] ----------GDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGAD-NV---AVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVE--LAIE-YARVLLAGA-FIIV--FNNVGNGILRGEGDANR-AMLAMVLGS---GLNIVLDPI-FIY----TLGFGVVGAAYATLLSMV-VTSLFIAYW--LFVKRDTY--VDITLRDFSPSRE---ILKDILRVGLPSSLSQ-LSMSIAMFFLNSVAITAG-GENG-VAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAV--VAFIMLFAPQVAYLFT-------I-KGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTL-VMQ-VG-FAYI-FVH--YTT-----LGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKT---------
4 PsiBlast_PDB 93.1526%-132 - C2 -3VVR ? A:[14-454] ----------GDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGAD-NV---AVHSLILSLILGVTITITMLPAIDSLFRSMGAKGEAVE--LAIE-YARVLLAGA-FIIV--FNNVGNGILRGEGDANR-AMLAMVLGS---GLNIVLDPI-FIY----TLGFGVVGAAYATLLSMV-VTSLFIAYW--LFVKRDTY--VDITLRDFSPSRE---ILKDILRVGLPSSLSQ-LSMSIAMFFLNSVAITAG--ENG-VAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAV--VAFIMLFAPQVAYLFTY------I-KGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTL-VMQ-VG-FAYI-FVH-----------GLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKT---------
1 PsiBlast_PDB 90.9426%-131 - C2 -3VVN ? A:[14-454] ----------GDPKKAIVRLSIPMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGAD-NV---AVHSLILSLILGVTITITMLPAIDSLFRSMGA--EAVE--LAIE-YARVLLAGA-FIIV--FNNVGNGILRGEGDANR-AMLAMVLGS---GLNIVLDPI-FIY----TLGFGVVGAAYATLLSMV-VTSLFIAYW--LFVKRDTY--VDITLRDFSPSRE---ILKDILRVGLPSSLSQ-LSMSIAMFFLNSVAITAG-GENG-VAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAV--VAFIMLFAPQVAYLFT----AQVI-KGDLISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFRTL-VMQ-VG-FAYI-FVH--YTT-----LGLRGVWIGIVIGNMVAAIVGFLWGRMRISALKKT---------
17 HHSearch 90.8625%-132 - C2 -3W4T ? A:[9-444] -----VQLLRGDPKKAIVRLSIAMMIGMSVQTLYNLADGIWVSG-LGPESLAAVGLFFPVFMGIIALAAGLGVGTSSAIARRIGARDKEGAD-NVAVHSLILSLILGVTITITMLPAIDSLFRSMGA---KGEAVE--LAIE-YARVLLAGA-FIIV--FNNVGNGILRGEGDANR-AMLAMVLGS---GLNIVLDPI-FIY----TLGFGVVGAAYATLLSMV-VTSLFIAYW--LFVKRDTY--VDITLRDFSPSRE---ILKDILRVGLPSSLSQ-LSMSIAMFFLNSV-AITAGGENG-VAVFTSAWRITMLGIVPILGMAAATTSVTGAAYGERNVEKLETAYLYAIKIAFMIELAV--VAFIMLFAPQVAYLFTY-----VIKGDL-ISALRTLPVFLVLTPFGMMTSAMFQGIGEGEKSLILTIFR-TLVMQ-VG-FAYI-FVHYTT-------LGLRGVWIGIVIGNMVAAIVG-FL-WG-----------------