Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0005: (2016-03-11 )
MHLESIVLRNFRNYENLELEFSPSVNVFLGENAQGKTNLLEAVLMLALAKSHRTTNDKDFIMWEKEEAKMEGRIAKHGQSVPLELAITQKGKRAKVNHLEQKKLSQYVGNLNVVIFAPEDLSLVKGAPGIRRRFLNMEIGQMQPIYLHNLSEYQRILQQRNQYLKMLQMKRKVDPILLDILTEQFADVAINLTKRRADFIQKLEAYAAPIHHQISRGLETLKIEYKASITLNGDDPEVWKADLLQKMESIKQREIDRGVTLIGPHRDDSLFYINGQNVQDFGSQGQQRTTALSIKLAEIDLIHEETGEYPVLLLDDVLSELDDYRQSHLLGAIEGKVQTFVTTTSTSGIDHETLKQATTFYVEKGTVKKS

Atome Classification :

	(20 SA)									----.........10-...-.-.....--20....-----....30.........40--..-..-----.....50.-------..-.-....60.....---------------------------------...70.....---------------...80........90--------........100---.........110--........120..-------.....130.-.......-140-.......150.......160......--.170.......180....---------...190........200.......210..-.....220-------..-.....230.....-..240.......250.......260.....----..270.......-----------280.....--------..290.......300...----....310.......320.......330...------------.-...340......--.350--...-....360.......370-------------
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		----MHLESIVLRN--FRN-Y-ENLEL--EFSPSV-----NVFLG-ENAQGKTNLL---EA-VL-----MLALAKSH-------RT-T-NDKDFIMWEKE---------------------------------EAKMEGRIAK---------------HGQSVPLELAITQKG--------KRAKVNHLE-----QKKLSQYVGNL---NVVIFAPEDLSLV-------KGAPGIR-R-RFLNMEI-GQM-QPIYLHNLSEYQRILQQRNQYLKMLQ--MKRKVDPILLDILTEQFA---------DVAIN-LTKRRADFIQKLEAYAAPIHHQI-SRGLETLK-------IE-YKASITLNGDDPE-VWKADLLQKMESIKQREIDRGVTLIGPHRD----DSLFYINGQNVQ-----------DFGSQGQQ--------RTTALSIKLAEIDLIHEE----TGEYPVLLLDDVLSELDDYRQSHLLGAIEG------------K-VQTFVTTTSTSG--IDHE--TLK-QATTFYVEKGTVKKS---------------
1	PsiBlast_PDB	85.32	32%	-57	- C4 -	2O5V		RECF_DEIRA	A:[4-345]	----VRLSALSTLN--YRN-L-APGTL--NFPEGV-----TGIYG-ENGAGKTNLL---EA-A------YLALTGQT-------DA-P-RIEQLIQAGET---------------------------------EAYVRADLQQ---------------GGSLSIQEVGLGRGR--------RQLKVDGVR-----AR-----TGDLPRGGAVWIRPEDSELV-------FGPPSGR-R-AYLDSLL-SRL-SARYGEQLSRYERTVSQRNAALRGGEEWAMHVWDDVLLKLGTE---------------IM-LFRRRA--LTRLDELAREANAQLGSR--KTLA-------LT-LTESTS-----PE-TYAADLRGR----RAEELARGSTVTGPHRD----DLLLTLGDFPAS-----------DYASRGEG--------RTVALALRRAELELLREK----FGEDPVLLLDDFTAELDPHRRQYLLDLAAS------------V-PQAIVTGTELAP--GAAL--TLRAQAGRF-------------------------
36	HHSearch	82.28	28%	-65	- C4 -	2O5V		RECF_DEIRA	A:[4-346]	----VRLSALSTLN--YRN-L-APGTL--NFPEGV-----TGIYG-ENGAGKTNLL---EA-AY-----LALTGQTD-------AP---RIEQLIQAGET---------------------------------EAYVRADLQQ---------------GGSLSIQEVGLGRGR--------RQLKVDGVR-----A-RTGDL-PRG---GAVWIRPEDSELV-------FGPPSGR-R-AYLDSLL-SRL-SARYGEQLSRYERTVSQRNAALRGG--------EEWAMHVWDDVLL---------KLGTE-IMLFRRRALTRLDELAREANAQL-GSR-KTLA-------LT-LTESTSPE----------TYAADLRGRRAEELARGSTVTGPHRD----DLLLTLGDFPAS-----------DYASRGEG--------RTVALALRRAELELLREK----FGEDPVLLLDDFTAELDPHRRQYLLDLAAS------------V-PQAIVTGTELAP--GA---------ALTLRAQAGRFT-----------------
57	Fugue	82.08	26%	-58	- C4 -	2O5V		RECF_DEIRA	A:[2-359]	--GDVRLSALSTLN--YRN-L-APGTL--NFPEGV-----TGIYG-ENGAGKTNLL---EA-AY-----LALTGQTD-------AP---RIEQLIQAGET---------------------------------EAYVRADLQQ---------------GGSLSIQEVGLGRGR--------RQLKVDGVR-----AR--TGDLPRG---GAVWIRPEDSELV-------FGPPSGR-R-AYLDSLL-SRL-SARYGEQLSRYERTVSQRNAALR--------GGEEWAMHVWDDVLL---------KLGTE-IMLFRRRALTRLDELAREANAQL-G-SRKTLA-------LT-LTESTS----------PETYAADLRGRRAEELARGSTVTGPHRD----DLLLTLGDFPAS-----------DYASRGEG--------RTVALALRRAELELLREK----FGEDPVLLLDDFTAELDPHRRQYLLDLAAS------------V-PQAIVTGTELAP--GAALTLRAQ-AGRFTPVADEEMQAEGTA------------
60	Fugue	57.37	18%	-47	- C2 -	1E69	-	?	A:[1-1164]	----MRLKKLYLKG--FKS-FGRPSLI--GFSDRV-----TAIVG-PNGSGKSNII---DA-IK-----WV-FGEKF-------DM-I-FAGSENLPPAG---------------------------------SAYVELVFEE---------------NGEEITVARELKRTG--------ENTYYLNGS-----PVRLKDIRDRF---AGTGLGVDFYSIV-------G--------------------------------------QGQIDRIVN--AYQRVNESFNRFISLLFF---------G--------------------------------------------GE-GRLEISIRKPGRR-DQKLSLL-----------------------------------------------------SGGEK--------ALVGLALLFALM-----E----IKPSPFYVLDEVDSPLDDYNAERFKRLLKENS----------K-HTQFIVITH------NKI--VME-AADLLHGVTMVNGVSAIVPVEV--------
62	Fugue	50.33	20%	-41	- C1 -	3DSM		?	A:[1-327]	------ASGLFITNEGNFQ-Y-SNATLS-YYDPATCEVENEVFYR-ANGFKLGDVA---QSMVIRDGIGWIVVNNSH---------------VIFAIDIN---------------------------------TFKEVGRIT-----------------GFTSPRYIHFLSD---------EKAYVTQ--------------IWDY---RIFIINPKTYEIT-------GYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVD--ELT------IGIQPTSLVM--------DKYNKMWTITDGGYEGSPYGYEAPSLYRI-D--AETFT-------VE-KQFKFKL-GDWPS---------------------EVQLNGTR------DTLYWINNDIWRM----------PVEADRVP--------VRPFLEFRDTKYYGLTVN----PNNGEVYVAD----------------AIDY------------Q-QQGIVYRYSPQGKLIDEF--YVG-IIPGAFCWKLEHHHHH--------------
43	HHSearch	50.12	24%	-36	- C4 -	1F2T	-	RAD50_PYRFU	A:[1-88]	----MKLERVTVKN--FRS-H-SDTVV--EFKEGI-----NLIIG-QNGSGKSSLL---DA-IL-----VGLYWPLR-------IK-DIKKDEFTKVGAR---------------------------------DTYIDLIFEK---------------DGTKYRI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22	PsiBlast_CBE	50.05	37%	-21	- C4 -	4NCH		?	B:[1-80]	----MKLERVTVKN--FRS-H-SDTVV--EFKEGI-----NLIIG-QNGSGKSSLL---DA-IL-----V-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
58	Fugue	49.31	11%	-19	- C2 -	3EUJ		MUKB_HAEDU	A:[3-483]	MIARGKFRSLTLIN--WNG-F-FARTF--DFDELV-----TTLSG-GNGAGKSTTM---AG-FV-----TALIPDLT-------LL-N-FRNTTEAGSTS---------------------------------SSRDKGLYGKLKAGVCYAVLETVNSRAQRIITGVRLQQIAGRDKKVDIRPFSLQNVPMTDSVISLFTEQVANK---ARVLSLNDLKEKFEETAVTFKPYHSIT-D-YHSFMFD-LGI-LPKRLRSSSDRNKFYKLIEASLYGGI--SSVITKS--LRDYLLPEN---------SGVRQ-AFQDAESVANILRKTIQREQNRI-LQLNQGLQNIAFGQVKG-VRLVVNIRDTHSI-LLNALSDQSFSEALAMLYKRIGEELLDYRN----YLDLEVETLRGAYGWMRAESSALSTGEAIGT--------GMSILLMVVQSWEEESRRMRAKDILPCRLLFLDQAARLDAMSINTLFELCER------------LDMQLLIAAPEN----ISPE--RGT-TYKLVRKILANQEYVHVVGLKGFG------
4	PsiBlast_PDB	48.79	37%	-22	- C4 -	1F2T	-	RAD50_PYRFU	A:[1-49]	----MKLERVTVKN--FRS-H-SDTVV--EFKEGI-----NLIIG-QNGSGKSSLL---DA-IL-----V-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34	PsiBlast_CBE	48.26	31%	-21	- C4 -	3QF7		RAD50_THEMA	B:[1-70]	----MRPERLTVRN--FLG-L-KNVDI--EFQSGI-----TVVEG-PNGAGKSSLF---EA-IS-----FALFGNGI-------RY-P-NSYDYV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11	PsiBlast_PDB	48.04	31%	-15	- C4 -	4W9M		?	C:[1-73]	----MRPERLTVRN--FLG-L-KNVDI--EFQSGI-----TVVEG-PNGAGKSSLF---EA-IS-----FALFGNGI-------RY-P-NSYDYV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15	PsiBlast_PDB	47.84	33%	-22	- C4 -	3AUX		RAD50_METJA	A:[3-70]	----MILKEIRMNN--FKS-H-VNSRI--KFEKGI-----VAIIG-ENGSGKSSIF---EA-VF-----F-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45	HHSearch	47.77	24%	-41	- C4 -	3QKS	-	RAD50_PYRFU	A:[1-84]	----MKLERVTVKN--FRS-H-SDTVV--EFKEGI-----NLIIG-QNGSGKSSLL---DA-IL-----VGLYWPLR-------IKDI-KKDEFTKVGAR---------------------------------DTYIDLIFEK---------------DGTKYRI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33	PsiBlast_CBE	47.59	31%	-19	- C4 -	4W9M		?	E:[1-74]	----MRPERLTVRN--FLG-L-KNVDI--EFQSGI-----TVVEG-PNGAGKSSLF---EA-IS-----FALFGNGI-------RY-P-NSYDYV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
66	Fugue	47.35	18%	16	- C3 -	4O6D		?	A:[19-377]	----LYFQSNADTG--CAIDI-SRQEL--RCGSGV-----FIHNDVEAWMDRYKYYPETPQ-GL-----AKIIQKAHKEGVCGLRS-V-SRLEHQMWEAV---------------------------------KDELNTLLKE---------------NGVDLSVVVE-KQEG--------MYKSAP---------KRLTA-TANN---TFVVDGPET-----------KECPTQN-R-AWNSLEV-EDF-G----FGLTSTRMFLKVRES---------------------------------------N-TTECDSKIIGTAVKNNLAIHSDL-SYWIESRL-------NDTWKLERAVLGEVKSCTWPETHTLWGDGILESDLIIPVTLAGPR------SNHNRRPGYKTQ-----------NQGPWDEG--------R--------VEIDFDYCP----GTTVTL-------SESCGHRGPATRTTTESGKLITDWCCRSCT-LPPLRYQTDSGC--WYGM--EIR-PQRH---DEKTLVQSQVNA-----------
30	PsiBlast_CBE	47.35	37%	-17	- C4 -	4NCJ		?	B:[1-73]	----MKLERVTVKN--FRS-H-SDTVV--EFKEGI-----NLIIG-QNGSGKSSLL---DA-IL-----V-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29	PsiBlast_CBE	47.31	37%	-22	- C4 -	4NCJ		?	C:[1-64]	----MKLERVTVKN--FRS-H-SDTVV--EFKEGI-----NLIIG-QNGSGKSSLL---DA-IL-----V-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
61	Fugue	47.05	14%	-22	- C2 -	4UX3		SMC3_YEAST	A:[3-527]	-----YIKRVIIKG--FKT-Y-RNETIIDNFSPHQ-----NVIIG-SNGSGKSNFF---AA-IR-----FVLSDDYS-------NL-K-REERQGLIHQGSGGSVMSASVEIVIRRTVGLKKDDYQLNDRNVTKGDIVRMLET---------------AGFSMNNPYNIVPQG--------KIVALTNAK-----DKERLQLLEDVV--GAKSFEVKLKASL-------KKMEETE-Q-KKIQIN---KE-MGELNSKLSEMEQERKELEKYNELER--NRKIYQFTLYDRELNEVINQMETSDQLLQRLN-DMNTEISGLKNVNKRAFENFKKF-NERRKDLA-------ER-ASELDESKDSIQD-LIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHSISV-----------SFNSKQNEQLHVEQLSGGQKTVCAIALILAIQMV----D-PASFYLFDEIDAALDKQYRTAVATLLKE------------L-SKNAQFICTT----FRTD--MLQ-VADKFFRVKYENKISTVIEVNREEAIGFIR
16	PsiBlast_PDB	47.02	33%	-19	- C4 -	3AUY		RAD50_METJA	A:[3-52]	----MILKEIRMNN--FKS-H-VNSRI--KFEKGI-----VAIIG-ENGSGKSSIF---EA-VF-----F-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32	PsiBlast_CBE	46.86	31%	-15	- C4 -	4W9M		?	I:[1-73]	----MRPERLTVRN--FLG-L-KNVDI--EFQSGI-----TVVEG-PNGAGKSSLF---EA-IS-----FALFGNGI-------RY-P-NSYDYV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------