@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0020: (2016-03-11 )
MAEPKYAIIINDIKRLISDGTFKPGEKIYSEDELKKKYNVSNTTVVRALHELVRAGILARYQGKGTYVSKSIINEEVIFNEYTTVPNGRFNRKTKITNEHTKVVAINEIQDARIAKKLQIPPENMIVHFQRIRLIDDLPWTVQNNYMAKSNLINVDLTNFEKFNSLSEVIKELYGINILHEAMKERIEVEFPVKDKNNFKLLEIDTELPLYHIERITYVPEGQPYEYIESYLRHNFYSIEIEKKKQ

Atome Classification :

(20 SA) .........10........20....-....30...-.....40........50........60........70......-..80........90..-...-...100.......110.-.-----......120-........130.......140.......150.......160.......170......------.180.......190.......200-.......210.......220.-......230.......240....-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MAEPKYAIIINDIKRLISDGTFKPG-EKIYSEDEL-KKKYNVSNTTVVRALHELVRAGILARYQGKGTYVSKSIINEEV-IFNEYTTVPNGRFNRK-TKI-TNEHTKVVAINEIQ-DA-R-----IAKKLQI-P-PENMIVHFQRIRLIDDLPWTVQNNYMAKSNLINVDLTNFEKFNSLSEVIKELYGINI------LHEAMKERIEVEFPVKDKNNFKLL-EIDTELPLYHIERITYVPEGQ-PYEYIESYLRHNFYSIEIEKKKQ-
1 PsiBlast_PDB 84.3323% -76 - C1 -4U0V YVOA_BACSU A:[13-237] ---PIYYQIMEQLKTQIKNGELQPD-MPLPSEREY-AEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVSKPKMEQALQGLTSFTE------DMK-SRG-MTPGSRLIDYQLID-STEE-----LAAILGC-G-HPSSIHKITRVRLANDIPMAIESSHIPFELAGELNESHFQ--SSIYDHIERYNSIPI----------SRAKQELEPSAATTEEANIL-GIQKGAPVLLIKRTTYLQNGT-AFEHAKSVYRGDRYT---------
2 PsiBlast_PDB 83.4023% -73 - C1 -4U0W YVOA_BACSU A:[13-237] ---PIYYQIMEQLKTQIKNGELQPD-MPLPSEREY-AEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVSKPKMEQALQGLTSFTE------DMK-SRG-MTPGSRLIDYQLID-STEE-----LAAILGC-G-HPSSIHKITRVRLANDIPMAIESSHIPFELAGELNESHFQ--SSIYDHIERYNSIPI----------SRAKQELEPSAATTEEANIL-GIQKGAPVLLIKRTTYLQNGT-AFEHAKSVYRGDRYT---------
3 PsiBlast_PDB 81.8823% -72 - C1 -2WV0 YVOA_BACSU A:[10-234] ---PIYYQIMEQLKTQIKNGELQPD-MPLPSEREY-AEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVSKPKMEQALQGLTSFTE------DMK-SRG-MTPGSRLIDYQLID-STEE-----LAAILGC-G-HPSSIHKITRVRLANDIPMAIESSHIPFELAGELNESHFQ--SSIYDHIERYNSIPI----------SRAKQELEPSAATTEEANIL-GIQKGAPVLLIKRTTYLQNGT-AFEHAKSVYRGDRYT---------
61 Fugue 81.1920% -81 - C1 -3BWG YYDK_BACSU A:[8-236] ------QQIATEIETYIEEHQLQQG-DKLPVLETLMAQ-FEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYI-SLL-----------SN-QGD-FNVTSKVIELDVRKPTP-E-----AAENLNI-GMDED-IYYVKRVRYINGQTLCYEESYYTKSIVTYLNNEIVS--HSIFHYIREGLGLKI------GFSDLFLHVGQ----LNEEEAEYL-GLEAGLPKLYIESIFHLTNGQ-PFDYSKISYNYEQSQFVVQANS--
39 HHSearch 78.9420% -73 - C1 -3BWG YYDK_BACSU A:[8-236] ------QQIATEIETYIEEHQLQQG-DKLPVLETL-MAQFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYI-SLLSNQG----------DF---NVTSKVIELDVRKPTP-E-----AAENLNI-G-MDEDIYYVKRVRYINGQTLCYEESYYTKSIVTYLNN-E-IVSHSIFHYIREGLGLKI--------GFSDLFLH--VGQLNEEEAEYL-GLEAGLPKLYIESIFHLTNGQ-PFDYSKISYNYEQSQFVVQANS--
8 PsiBlast_PDB 78.3824% -89 - C1 -3BWG YYDK_BACSU A:[8-218] ------QQIATEIETYIEEHQLQQG-DKLPVLETL-MAQFEVSKSTITKSLELLEQKGAIFQVRGSGIFVRKHKRKGYI------SLLSNQG-------D-FNVTSKVIEL-----DV-RKPTPEAAENLNI-G-MDEDIYYVKRVRYINGQTLCYEESYYTKS--IVTYLNNEIVSHSIFHYIREGLGLKIGFSDLFLHVGQLNEEEAEY----------L-GLEAGLPKLYIESIFHLTNGQ-PFDY--------------------
40 HHSearch 76.9419% -58 - C1 -3F8M PHNF_MYCS2 A:[14-241] ---LKHQVVRAELDRMLD-G-MRIG-DPFPAEREI-AEQFEVARETVRQALRELLIDGRVER-RGRTTVVARPKIRQP---L-GMGSYTEAA---K-AQG-LSAGRILVAWSDLTADE-V-----LAGVLGV-D-VGAPVLQLERVLTTDGVRVGLETTKLPAQRYPGLRETF-DHEASLYAEIRS-RGIAF--------TRTVDTID--TALPDAREAALL-GADARTPMFLLNRVSYDQDDV-AIEQRRSLYRGDRMTFTAVMHA--
62 Fugue 71.7718% -52 - C1 -3F8M PHNF_MYCS2 A:[14-243] ----LKHQVVRAELDRMLDG-MRIG-DPFPAEREI-AEQFEVARETVRQALRELLIDGRVERR-GRTTVVARPKIRQPL-GMGSYTEAAKAQGLSA-GRI-LVAWSDLTA------DE-V-----LAGVLGV-D-VGAPVLQLERVLTTDGVRVGLETTKLPAQRYPGLRETFDHE-ASLYAEIRS-RGIAF----------TRTVDTIDTALPDAREAALL-GADARTPMFLLNRVSYDQDDV-AIEQRRSLYRGDRMTFTAVMHAKN
12 PsiBlast_PDB 71.0019% -57 - C1 -3F8M PHNF_MYCS2 A:[15-214] ----KHQVVRAELDRML-DG-MRIG-DPFPAEREI-AEQFEVARETVRQALRELLIDGRVER-RGRTTVVARPKIRQPL-GMGSYTEAAKAQGLSA-GRI-LVAWSDLTA------DE-V-----LAGVLGV-D-VGAPVLQLERVLTTDGVRVGLETTKLPAQRYPGLR----ETFDHEASLYAEIRSRGI------AFTRTVDTIDTALP--DAREAALL-GADARTPMFLLNRVSY------------------------------
43 HHSearch 63.6615% -66 - C1 -3EDP ? A:[7-235] -KKPLFEVIASKIKDSINRDEYKTG---MPNETAL-QEIYSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTAQN---ILEMTGVMKN------------LKKDIKDFYIRKAGK-F-----YAEIFGM-K-ENELVYSIKFVQKS-EHGATLDRLILPLGLYPDLQAKD-FQIINIIELVNS-GKYKL--------FELEQELQ--LILAGNEQIKNM-HLNENDPVFKLSSVFYAENDM-PIAIQYHYEDAESTKYVVDF----
15 PsiBlast_PDB 61.4523% -82 - C1 -2P19 - ? A:[3-143] -----------------------------------------------------------------------------------------NANLDPK-TRV-L-EHRLLAA------SS-A-----IAEKLGV-S-AGDEVLLIRRLRSTGDIPVAILENYLPPA-FNDVSLDELEKGG----LYDALRSRGV------VLKIANQKIGARRAVGEEST--LL-DIEDGGPLLTVERVALDNSGQ-VIELGSHCYRPDMYNFE-------
21 PsiBlast_CBE 59.1739% -99 - C1 -4H0E ARAR_BACSU B:[23-88] ---PKYAQVKEEISSWINQGKILPD-QKIPTENEL-MQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
63 Fugue 58.1216% -48 - C1 -3EDP ? A:[7-236] -KKPLFEVIASKIKDSINRDEYKTGMP---NETAL-QEIYSSSRTTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTAQNI-L--------------EMTGVMKNLKKDIKDFYIRK-AG-K-----FYAEIFGMK-ENELVYSIKFVQKSEH-GATLDRLILPLGLYPDLQAKDFQI-INIIELVNSG------------KYKLFELEQELQLILAGNEQIKNMHLNENDPVFKLSSVFYA-ENDMPIAIQYHYEDAESTKYVVDFN---
23 PsiBlast_CBE 57.7339% -94 - C1 -4EGY ARAR_BACSU B:[23-88] ---PKYAQVKEEISSWINQGKILPD-QKIPTENEL-MQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 57.1839% -92 - C1 -4H0E ARAR_BACSU A:[23-88] ---PKYAQVKEEISSWINQGKILPD-QKIPTENEL-MQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 57.1239% -94 - C1 -4EGZ ARAR_BACSU B:[23-88] ---PKYAQVKEEISSWINQGKILPD-QKIPTENEL-MQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 56.4439% -95 - C1 -4EGY ARAR_BACSU A:[23-88] ---PKYAQVKEEISSWINQGKILPD-QKIPTENEL-MQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 56.0639% -99 - C1 -4EGZ ARAR_BACSU A:[23-88] ---PKYAQVKEEISSWINQGKILPD-QKIPTENEL-MQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 55.7335% -94 - C1 -4R1H ? A:[9-76] -SKPIYKQIVHYIHTEIVTGTYEAG-DKLLSVREL-ATKLEVNPTTIQRAYAELEETEIIYTVRGTGKYLT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 53.6235% -85 - C1 -4R1H ? B:[9-76] -SKPIYKQIVHYIHTEIVTGTYEAG-DKLLSVREL-ATKLEVNPTTIQRAYAELEETEIIYTVRGTGKYLT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------