@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0028: (2016-03-11 )
MLVKGDTVGIICCSDGRKKEDENRIALLEQVLKTEFSLQVVFAETIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQKPFVGYSDLTVILNAIYTKTEQMGYNYQLLHLVGKDSELQQSHFRKTFFENRVLISGEQLNEFVWRGGEVIGGNIRCFLKLAGTNFMPDFTNKIILLESLGGKEAKLASYVAQLEQLGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKLPIFRTSEIGHSVDAKPCLIGAKVNVSRETLTNF

Atome Classification :

(20 SA) --------.........10.--....-...20......-..30........40.---.......50........60........70........80........90........100-.......110.......120-----------.--------------...---------..---------.---130.....---.--.140--.--------------------------...--..----...150..------------------------------..--...160.-.....----------------------..------------170.......180......-.190-.-.-.....200.--......--..210.......220.......230.......240.......250......---.260....--...270.......280.......290
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------MLVKGDTVGIIC--CSDG-RKKEDENRIAL-LEQVLKTEFSLQVVF---AETIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQ-KPFVGYSDLTVILNAIYTKT-----------E--------------QMG---------YN---------Y---QLLHLVGK---D--SE----L--------------------------QQS--HF----RKTFFENR------------------------------VL--ISGE-QL-NEFVW----------------------RG------------GEVIGGNIRCFLKLAGTNF-MPDF-T-N-KIILLE--S--LGGKEA--KLASYVAQLEQLGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKL---PIFRTSEI--GHSVDAKPCLIGAKVNVSRETLTNF
9 PsiBlast_PDB 88.9524% -89 - C5 -3TLZ MCCF_ECOLX A:[40-353] ---------LAVGDTIGFFS--SSAP-ATVTAKNRFFRGVEFLQRKGFKL---V---SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYSDTTALLAGIYAKT-----------G--------------LITF--------YG---------P---ALIPSFGE---H--PP----LVDITYESFIKILTRKQSGIYTYTLPEKWS--DE----SINFNENK------------------------------IL--RPKK-LYKNNCAF----------------------YGSGKVE-------GRVIGGNLNTLTGIWGSEW-MPEI-R-NGDILFIE--D--SRKSIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAI--------
1 PsiBlast_PDB 87.2527% -89 - C5 -4E5S ? A:[9-317] ---------LKKGDEIRVISPSCSLS-IVSTENRRLAV-KRL---TELGFHVTFSTHAEEIDRFASSSIS----SRVQDLHEAFRDPNVKAILTTLGGYNSNGLLKYLDYDLIRENP-KFFCGYSDITALNNAIYTKT-----------G--------------LVT---------YS---------G---PHFSSFGM---E--KG----L--------------------------EYTTDYF----LQCLTSNK------------------------------PIEVLPSE-TW-SDDSWYIDQENRKFIKNEGYVSIHEGEAT------------GDIIGGNMSTLNLLQGTSY-MPNL-K-D-KILFLEEDS--LTGTSTLKTFDRYLHSLMQQQNFKHVKGIVIGKMQKGAEC----TIEDIQEMIASKPELAHIPIIANASF--GHTTPIFTFPIGGRATI--------
14 PsiBlast_PDB 85.9323% -88 - C5 -3TLY MCCF_ECOLX A:[40-353] ---------LAVGDTIGFFS--SSAP-ATVTAKNRFFRGVEFLQRKGFKL---V---SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYADTTALLAGIYAKT-----------G--------------LITF--------YG---------P---ALIPSFGE---H--PP----LVDITYESFIKILTRKQSGIYTYTLPEKWS--DE----SINWNENK------------------------------IL--RPKK-LYKNNCAF----------------------YGSGKVE-------GRVIGGNLATLTGIWGSEW-MPEI-R-NGDILFIE--D--SRASIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAI--------
21 HHSearch 85.8924% -89 - C5 -3TLA MCCF_ECOLX A:[39-359] --------PLAVGDTIGFFS--SSAP-ATVTAKNRFFR-GVEFLQ-RKGFKLVS---G-KLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYSDTTALLAGIYAKT-----------G--------------LIT---------FY---------G---PALIPSFG---E--HPPLVDI--------------------------TYE--SF----IKILTRKQSGIYTYTLPEKWSDESINWNENKILRPKKLYK--NNC--AF-YGSGK----------------------VE------------GRVIGGNLNTLTGIWGSEW-MPEIRN-G-DILFIE--D--SRKSIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAIDFDNKN--
11 PsiBlast_PDB 85.1124% -90 - C5 -3TLA MCCF_ECOLX A:[40-353] ---------LAVGDTIGFFS--SSAP-ATVTAKNRFFRGVEFLQRKGFKL---V---SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYSDTTALLAGIYAKT-----------G--------------LITF--------YG---------P---ALIPSFGE---H--PP----LVDITYESFIKILTRKQSGIYTYTLPEKWS--DE----SINWNENK------------------------------IL--RPKK-LYKNNCAF----------------------YGSGKVE-------GRVIGGNLNTLTGIWGSEW-MPEI-R-NGDILFIE--D--SRKSIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAI--------
12 PsiBlast_PDB 84.6424% -88 - C5 -3TLE MCCF_ECOLX A:[40-353] ---------LAVGDTIGFFS--SSAP-ATVTAKNRFFRGVEFLQRKGFKL---V---SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYSDTTALLAGIYAKT-----------G--------------LITF--------YG---------P---ALIPSFGE---H--PP----LVDITYESFIKILTRKQSGIYTYTLPEKWS--DE----SINWNENK------------------------------IL--RPKK-LYKNNCAF----------------------YGSGKVE-------GRVIGGNLNTLTGIWGSEW-MPEI-R-NGDILFIE--D--SRKSIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAI--------
13 PsiBlast_PDB 84.6024% -86 - C5 -3TLB MCCF_ECOLX A:[40-353] ---------LAVGDTIGFFS--SSAP-ATVTAKNRFFRGVEFLQRKGFKL---V---SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYSDTTALLAGIYAKT-----------G--------------LITF--------YG---------P---ALIPSFGE---H--PP----LVDITYESFIKILTRKQAGIYTYTLPEKWS--DE----SINWNENK------------------------------IL--RPKK-LYKNNCAF----------------------YGSGKVE-------GRVIGGNLNTLTGIWGSEW-MPEI-R-NGDILFIE--D--SRKSIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAI--------
17 PsiBlast_PDB 84.1523% -88 - C5 -4IIY MCCF_ECOLX A:[40-353] ---------LAVGDTIGFFS--SSAP-ATVTAKNRFFRGVEFLQRKGFKL---V---SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYADTTALLAGIYAKT-----------G--------------LITF--------YG---------P---ALIPSFGE---H--PP----LVDITYESFIKILTRKQSGIYTYTLPEKWS--DE----SINWNENK------------------------------IL--RPKK-LYKNNCAF----------------------YGSGKVE-------GRVIGGNLNTLTGIWGSEW-MPEI-R-NGDILFIE--D--SRKSIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAI--------
16 PsiBlast_PDB 83.5523% -90 - C5 -4IIX MCCF_ECOLX A:[40-353] ---------LAVGDTIGFFS--SSAP-ATVTAKNRFFRGVEFLQRKGFKL---V---SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYADTTALLAGIYAKT-----------G--------------LITF--------YG---------P---ALIPSFGE---H--PP----LVDITYESFIKILTRKQSGIYTYTLPEKWS--DE----SINWNENK------------------------------IL--RPKK-LYKNNCAF----------------------YGSGKVE-------GRVIGGNLNTLTGIWGSEW-MPEI-R-NGDILFIE--D--SRKSIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAI--------
20 PsiBlast_PDB 83.3124% -65 - C5 -4H1H ? A:[9-300] ---------LKQGDEIRIIA--PSRS-IGIMADNQVEI-AVNRL-TDMGFKVTF---GEHV-AEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENP-KILCGFSDITALATAIYTQT-----------E--------------LIT---------YSGAHFSSFSME---KGLDYVMESFSD--CL----L--------------------------QKE--PFALKESATWSDDE------------------------------WY--LDQE-NR-NFIPN----------------------EGLVVMQPGVAE--GIIIGGNLCTLNLLQGTEY-MPNL-A-G-TILFIE--DDFMTIPET--FDRDLESLLSQPGA-DEIEGMVIGRFQQ-KTAMTAEKLAYIIETKTALQKI---PVISGADF--GHT----------------------
15 PsiBlast_PDB 83.2823% -87 - C5 -3TLC MCCF_ECOLX A:[40-353] ---------LAVGDTIGFFS--SSAP-ATVTAKNRFFRGVEFLQRKGFKL---V---SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANP-KIIIGYADTTALLAGIYAKT-----------G--------------LITF--------YG---------P---ALIPSFGE---H--PP----LVDITYESFIKILTRKQSGIYTYTLPEKWS--DE----SINWNENK------------------------------IL--RPKK-LYKNNCAF----------------------YGSGKVE-------GRVIGGNLNTLTGIWGSEW-MPEI-R-NGDILFIE--D--SRKSIA--TVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQI---PVLDGFDC--SHTHPMLTLPLGVKLAI--------
4 PsiBlast_PDB 83.0624% -72 - C5 -4INJ ? A:[9-300] ---------LKQGDEIRIIA--PSRS-IGIMADNQVEI-AVNRL-TDMGFKVTF---GEHV-AEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENP-KILCGFADITALATAIYTQT-----------ELITYSGAHFSSFSMEKG---------LD---------Y---VMESF--S---D--CL----L--------------------------QKE--PFALKESATWSDDE------------------------------WY--LDQE-NR-NFIPN----------------------EGLVVMQPGVAE--GIIIGGNLCTLNLLQGTEY-MPNL-A-G-TILFIE--DDFMTIPET--FDRDLESLLSQPGA-DEIEGMVIGRFQQ-KTAMTAEKLAYIIETKTALQKI---PVISGADF--GHT----------------------
42 Fugue 79.0718% -86 - C5 -1ZL0 LDC_PSEAE A:[5-310] SRPSSDQTWQPIDGRVALIA--PASAIATDVLEATLRQ-LEV-----HGVDYHL---GRHVEAR-YRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCGQLLPGLDWGRLQAASPRPLIGFSDISVLLSAFHRHG-----------L--------------PAI---------HG---------P---VATGLGLS---PLSAP----R--------------------------EQQ--ER----LASLASVS------------------------------RL--LAGI-DH-ELPVQ----------------------HLGGHKQRVE----GALIGGNLTALACMAGTLGGLHAP-A-G-SILVLE--D--VGEPYY--RLERSLWQLLESIDARQLGAICLGSFTDCPRKEVAHSLERIFGEYAAAIEV---PLYHHLPS--GHGAQNRAWPYGKTAVLEGNRLRWG
5 PsiBlast_PDB 78.9726% -78 - C5 -3T5M ? A:[61-321] ---------------------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNP-KIMIGYADATALLLGIYAKTGIPTFYGPALVP--------------SFGEFEPFVDDTYK---------YFLETLLHDQAL---P--YN----I--------------------------KQP--LF----WSDEFINW------------------------------EE--KTKEKEL-RPNNWISVTNGQ---------------AT------------GRVIGGNLNTIQGIWGSPY-MPCI-QEG-DILFIE--D--SSKDAA--TIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRI---PLLADFDC--CHTHPMITMPIGVQVKM--------
18 PsiBlast_PDB 78.6025% -73 - C5 -4MI1 ? A:[61-328] ---------------------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNP-KIMIGYADATALLLGIYAKTGIPTFYGPALVP--------------SFGEFEPFVDDTYK---------YFLETLLHDQAL---P--YN----I--------------------------KQP--LF----WSDEFINW------------------------------EE--KTKEKEL-RPNNWISVTNGQ---------------AT------------GRVIGGNLNTIQGIWGSPY-MPCI-QEG-DILFIE--D--SSKDAA--TIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRI---PLLADFDCCATHPMITMPIGVQVKMDATNKTI---
3 PsiBlast_PDB 78.4526% -78 - C5 -3U1B ? A:[61-321] ---------------------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNP-KIMIGYSDATALLLGIYAKTGIPTFYGPALVP--------------SFGEFEPFVDDTYK---------YFLETLLHDQAL---P--YN----I--------------------------KQP--LF----WSDEFINW------------------------------EE--KTKEKEL-RPNNWISVTNGQ---------------AT------------GRVIGGNLNTIQGIWGSPY-MPCI-QEG-DILFIE--D--SRKDAA--TIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRI---PLLADFDC--CHTHPMITMPIGVQVKM--------
8 PsiBlast_PDB 78.3225% -71 - C5 -4MJX ? A:[61-328] ---------------------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNP-KIMIGYADATALLLGIYAKTGIPTFYGPALVP--------------SFGEFEPFVDDTYK---------YFLETLLHDQAL---P--YN----I--------------------------KQP--LF----WSDEFINW------------------------------EE--KTKEKEL-RPNNWISVTNGQ---------------AT------------GRVIGGNLNTIQGIWGSPY-MPCI-QEG-DILFIE--D--SSKDAA--TIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRI---PLLADFDCCATHPMITMPIGVQVKMDATNKTI---
6 PsiBlast_PDB 78.1925% -83 - C5 -3TYX ? A:[61-321] ---------------------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNP-KIMIGYSDATALLLGIYAKTGIPTFYGPALVP--------------SFGEFEPFVDDTYK---------Y---FLETLL-H---D--QA----L--------------------------PYN--IK----QPLFWSDE------------------------------SI--NWEE-KT-KEKEL----------------------RPNNWISVTNGQATGRVIGGNLNTIQGIWGSPY-MPCI-QEG-DILFIE--D--SSKDAA--TIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRI---PLLADFDC--CHTHPMITMPIGVQVKM--------
7 PsiBlast_PDB 78.1225% -76 - C5 -4JVO ? A:[61-328] ---------------------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNP-KIMIGYADATALLLGIYAKTGIPTFYGPALVP--------------SFGEFEPFVDDTYK---------YFLETLLHDQAL---P--YN----I--------------------------KQP--LF----WSDEFINW------------------------------EE--KTKEKEL-RPNNWISVTNGQ---------------AT------------GRVIGGNLNTIQGIWGSPY-MPCI-QEG-DILFIE--D--SSKDAA--TIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRI---PLLADFDCCATHPMITMPIGVQVKMDATNKTI---
2 PsiBlast_PDB 77.7126% -78 - C5 -3SR3 - ? A:[58-318] ---------------------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNP-KIMIGYSDATALLLGIYAKTGIPTFYGPALVP--------------SFGEFEPFVDDTYK---------YFLETLLHDQAL---P--YN----I--------------------------KQP--LF----WSDEFINA------------------------------EE--KTKEKEL-RPNNWISVTNGQ---------------AT------------GRVIGGNLNTIQGIWGSPY-MPCI-QEG-DILFIE--D--SSKDAA--TIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRI---PLLADFDC--CHTHPMITMPIGVQVKM--------