@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0047: (2016-03-11 )
MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISNDNEYEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVSEQAGDVTSWKIERELDTTYYEVTVKQDNNKYEIKLNAKTLEILQTEQDD

Atome Classification :

(20 SA) ---------------------....-.....10........----20.....----.-..30........40-........50.---.......60....--....70....---------------..----------..80..---.--.-----...-.90-------........----.-100-----------------.......110.......120....-----...130.-....-.--.140-........150---..---------------.-.--..---.-------.-.160...-.----------...-----170--.....----------------------....180--.--.--.-.....--------------------190.-----......200.---------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------------------MYKK-LATVGMTVLLVGALS----ACSFNDD----K-DTSSNNSNNETTSS-KSSNNESSSDS---LQNKSLDMSYEDA--INAFKDKHSD---------------AE----------ISSVEL---E--K-----SLG-KY--------VYKVDGIS----N-DNE-----------------YEMKFNAETKEQLSDETDRLDRED-----AGGVEKE-NEKL-S--LDG--IKSPKEAMD-----KA---------------V-S--EQ---A-------G-DVTSWKI-E----------REL-----D----TTYYE----------------------VTVKQD---N--N--K-YEIKL--------------------NAKT-----LEILQTEQDD---------
1 PsiBlast_PDB 96.0139% -6 - C8 -4EXR ? A:[22-173] ---------------------------------------------------------------------------------NEN---LMEQDFKVPYTDA--INIFKDKYKD---------------AD----------IVDLSL---E--R-----DLN-KF--------VYTVEGVD----D-NNE-----------------YKMKIDANTKDVLEDKTEKLDSED-----LNGVARK--EKL-D--LND--IMTPQQAME-----IA---------------L-K--EQ---N-------G-IVKEWSL-D----------KDL-----D----VTFYK----------------------IRIDKD---K--N--E-YDIKV--------------------DSKK-----GTVLKVEKE----------
55 Fugue 68.1419% 25 - C3 -4RWR - ? A:[55-323] VYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALA----ARTFVVQ----RMLSGGKKNNADVTDT-DQVYK---SKE---ELKKQWGNNYENN--LKKIEEAVSK---------------TAGQVLTYEGKPISASFF---S--T-----SNG-RT--------ENAADYWG----N-DYP-----------------Y-LKSVDSPWDQASPKFTSEQIFT-----VADFQKRLGVKV-L--ADG--KVGDIKGRTEGKRVKD---------------V-A--FQ---G-------K-TLTGRDV-R----------DKL-----E----LRSSD----------------------FTWKQE---G--D--K-IVVTTKGFGHGVGMSQYGANGMAAEGKKY-----TDIVAHYYKGVEIKTMNDY
52 Fugue 67.8816% 14 - C4 -4XGC ORC2_DROME B:[62-352] -----EGSINAIMEEYRSYFPKWMC-ILNEGFNILLYGLGSKHQLLQSFHREVLHKQ-TVLVVNGFFPSLTI-KDMLDSITSDI---LDAGISPANPHEA--VDMIEEEFALIPETHLFLIVHNLDGAM----------LRNVKA---Q--A-----ILS-RLARIPNIHLLASIDHIN----T-PLL-----------------WDQGKLCSFNFSWWDCTTMLPYTN-----ETAFENS-LLVL-A--LSS--MRSVFSSLT-----TN---------------S-R--GI---Y-------M-LIVKYQL-KNKGNATGMPFRDL-----Y----SSCREAFLVSSDLALRAQLTEFLDHKLVKSKRS---S--E--Q-LTIPI--------------------DGAL-----LQQFLEEQE----------
12 HHSearch 61.7918% -20 - C8 -3ELG ? A:[14-127] ------------------------------------------------------------------------------------------------PVAA--REMIGKHFSQ---------------TK----------VAYIKI---E--K-----DLFQTT--------SYDVKLAD----G---------------------IELEFNS-KGEWLEIDCKNKS-------------------V-P---S----TFIPQAIS-----KY---------------MKA--NY---N-------GHKTVKIER-N-----------------------RKGYE----------------------LTLEN----------G-LEVDF--------------------DQ-F-----GGFLKLS------------
8 HHSearch 61.0818% 5 - C8 -3U1W ? A:[9-128] -----------------------------------------------------------------------------------------------PLPPV--ENAFQEKYPD---------------AK----------NPVFEI---E---------GN-----------YYVVDFNN----G-GSE-----------------TTAWFTD-QGIWMMEKIDISF------------------------------AQLPAAVS-----TA---------------F-KQSFY---S-------NWTVDDTYAIN----------RLN-----M----GIVYK----------------------IEAEQS---N--S--E-VDLYY--------------------SQY------GNLIKAVD-----------
6 HHSearch 60.0118% -2 - C8 -2GU3 YPMB_BACSU A:[12-133] -----------------------------------------------------------------------------------------------GHEAA--AAEAKKETDL---------------AH----------VDQVET---F--V-----GK--EK--------YYVVKGTD----KKGTA-----------------LYVWVPADKKAKIL-------------------------SK-E--AKE--GISEDKAAK-----II---------------K-D--EG---L-------VSKQKEVHL-A----------REG-----N----VLLWE----------------------VTYLDK---E--G--QYSLSYV--------------------DFTT-----GKILKN-------------
7 HHSearch 58.4715% 2 - C8 -3U1W ? A:[137-253] ---------------------------------------------------------------------------------------------IVIPKEV--SNLMEITFAN---------------AE----------LLDIQQ---N---------SL-----------GYELDMID----N-QIY-----------------KVAQLNK-DYRWQSTTWAMSE------------------------------QEVPQIVM-----QG---------------F-ESSAY---A-------SDKVQSIYT-L----------LNA-----N----GTFYL----------------------FKVSHN---G--Q--D-KTITF--------------------DV-F-----GNIV---------------
17 HHSearch 57.6726% -34 - C8 -3ELG ? A:[13-69] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LPVAAR-----EM---------------IGK--HF---S-------QTKVAYIKI-E----------KDLF----Q----TTSYD----------------------VKLADG-----------IELEF--------------------NS-K-----GEWLEIDCK----------
14 HHSearch 56.8116% 12 - C8 -3NQZ - ? A:[68-175] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDT-----------------VSLTFN--NGMLKKAHGAAVYNID--------------EDLSD--VSA--KLTKKDAIL-----KG---------------S-K--TG---IAAKSVGLKKHNEQSRL-AIWVDD-----QNK-----A----HLVYE----------------------VSYVTYGKSP--S--R-PYLII--------------------DANT-----GEVLLSY------------
11 HHSearch 56.6315% -17 - C8 -3DB7 ? A:[14-126] ------------------------------------------------------------------------------------------------PQLA--QQFIKQHFSD---------------SK----------VALAKM---E--S-----DFL-YK--------SYEVIFTN----G---------------------NKVEFDK-KGNWEEVDCKHTS-------------------V-P---VA----IIPAAIQ-----KY---------------VTT--NY---P-------DAKVLKIER-D----------K-------------KDYE----------------------VKLSNR-----------TELKF--------------------DL-K-----FNLIDID------------
48 Fugue 54.3317% 30 - C7 -4O8U - ? A:[1-227] ------SRIVAADTGGAVLDETFEP-IGLIATVAVLVE-------------------------KPYRSAKEVMVKYANPYDYDL---TGRQAIRDEVLLA--IELARKVKPD-----------------------------VIHL---D--S-----TLG-GIE-------LRKLDEPTIDALG-ISD-----------------KGKEVWKELSKDLQPLARKFWEETNIEIVAIGKSSV-PVRI-AEIYAG--IYSAKWGIE-----NVEKEGHLIIGLPRYMEV-N--IK---D-------G-KIIGRSL-D----------PRE-----G----GLYGS----------------------AEVSVP---E--GV-K-WEIYP--------------------NPVARRFMIFEIFS--------------
20 HHSearch 52.2417% 19 * C8 *2O3O YYCI_BACSU A:[143-252] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQ-----------------VVLHLNG-KNEVVSYDQTTLETFK---------------QI-Q--KES--LITEMDAVE-----LL---------------Y-Y--QNQLKE-------YSTVKSCKF-G----------YVAQYPLTSTQVLAPVWR----------------------ITVEYE---KEKKTVQ-EYFTV--------------------NALE-----STILDT-------------
13 HHSearch 51.1515% 9 - C8 -2GU3 - YPMB_BACSU A:[70-132] -----------------------------------------------------------------------------------------EAKEGISEDKA--AKIIKDEGLV---------------SK----------QKEVHL---A--R-----EGN-VL--------LWEVTYLD----KEGQY-----------------SLSYVDFTTGKILK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 HHSearch 50.2713% -7 - C8 -3DB7 ? A:[15-68] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLAQQ-----FI---------------K-Q--HF---S-------DSKVALAKM-E----------SDF-----L----YKSYE----------------------VIFTNG-----------NKVEF--------------------DK-K-----GNWEEVDCK----------
18 HHSearch 49.9319% 7 - C8 -3NQZ - ? A:[98-175] ------------------------------------------------------------------------------------------VSAKLTKKDA--ILKGSKTGIAAKSVGLK--------KH----------NEQSRLAIWVDDQ-----NKA-HL--------VYEVSYVTYGK-S-PSR-----------------PYLIIDANTGEVLLSY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 46.3325% 52 - C8 -1SI8 ? A:[329-435] ----------------------------------LLQGRLF----AYGDAHR----H-RVGANSHQLPINQA-KAPVNNYQKDGNMRFNNGNSEINYEP----NSYTETPKEDPT------------AK----------ISSFEV---E--G-----NVG-NY--------SYNQDHFT----Q-ANA-----------------LYNLLPSEEKENL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51 Fugue 45.6421% 50 - C7 -1EFN NEF_HV1BR B:[18-150] -----------------------------------------------------------------------------------R---PQVPLRPMTYKAAVDLSHFLKEKGG---------------LEGL--------IHSQRR---Q--D-----ILD-LW--------IYHTQGYF----P-DWQNYTPGPGVRYPLTFGWCYKLVPVREVLEWRFD--SRLAFHH-----VARELHP-EYF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 44.1034% 45 - C8 -2KJP - A:[16-70] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKIEVG-DKII-S--ADGKNYQSAEKLID-----YI---------------S-S--KK---A-------G-DKVTLKI-E----------REE-----K----EKRVT----------------------LTLKQ-----------------------------------------------------------------
22 HHSearch 43.4111% 19 - C8 -2LYX - YQZG_BACSU A:[19-83] ---------------------------------------------------------------------------------------------------A--VKEAKKRYPL---------------AQ----------VLFKQK---V--WDRKRKDEA-VK--------QYHLTLRE----G-SKEFGVF-------------VTISFDPYSQKVNKIAIL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49 Fugue 39.3421% 58 - C7 -2IFO - ? ?:[1-46] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SG-----GGGVDVG-DVVS-A--IQG--AAGPIAAIG-----GA---------------V-L--TV---M-------V-GIKVYKW-V----------RRA-----M-----------------------------------------------------------------------------------------------------