@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Lmo0052: (2016-03-11 )
MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGIILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPFMSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLYDRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHRIYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDLIQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQELITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEIEEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRSEEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLRTGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIATGHEDEEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGGHLSNAATQLKDVTIAEAEKQLISAIDAYWKGET
Atome Classification :
(20 SA)
.........10........20........30........40........50........60........70........80........90..-......100.......110.......120.......130.......140.......150.......160.......170.......180...----....190.......200.......210.......220.......230.......-240.......250....--...260.......270.------......280.......290.......300.......310.......320.......330......----.340.......350......-.360-------.....--...370---------.....-...----.-----380......--.--390-.......400.....-------..410----........420.......430-----....----...440.......450...----....460....-------....470.....-------------..--480------..--.....490..-.....500.....-..510-----------.-------------......-520--------------------..-----------..--.-...----530..-.--.--...---------------.540.-....----.----.550..---.---.------...560..-.---...---.---570.......580.......590----..-.....--.--.600.......610.-......-----620.......630...-....640.......650.....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MS
G
Y
F
Q
K
R
M
L
KY
P
L
Y
G
L
I
A
A
T
I
I
L
S
V
I
T
F
F
F
S
W
W
L
S
A
L
V
V
V
G
G
I
I
L
T
V
A
M
F
Y
F
E
Y
RLNE
D
V
Q
L
Y
VSN
L
T
Y
R
I
KRSE
E
E
A
L
V
EMP
M
G
I
L
L
Y
DE
H
-
Y
K
I
E
WV
N
P
F
M
S
K
Y
F
D
K
A
E
L
I
G
E
S
L
E
E
V
G
P
E
F
L
D
V
ITGNDEK
G
I
M
S
I
A
WRD
H
R
F
D
T
I
V
K
RK
E
R
I
L
Y
L
Y
DR
T
E
Y
YDLNKKFQANK
S
V
F
A
V
I
F
LD----
N
Y
D
E
W
A
Q
G
M
D
D
R
R
R
S
A
L
N
N
L
V
T
S
M
L
T
N
W
A
R
E
H
R
I
Y
L
KRI
S
T
D
R
F
M
A
F
L
T
E
E
M
L
K
-
R
L
E
E
E
K
F
Q
I
L
D
R
I
R
E
R
T--SKQNI
P
L
T
L
S
IGIGYKE------
D
D
L
I
Q
L
A
D
L
A
Q
S
S
L
D
LALGRGG
D
Q
V
V
I
KQPEG
K
V
R
F
YGGKTN
P
M
E
K
R
T
R
V
R
A
R
V
I
S
Q
A
L
Q
E
L
ITQ----S
D
Q
V
F
V
M
GHRYP
D
M
D
V
I
GSS-LG
V
--------
M
R
I
A
E--MNDR-----------
N
A
Y
V
V
-VEP----G-----KM
S
P
D
V
K
R
L
--
M
--
N
E
I
-
E
E
Y
P
N
V
I
K
N
IV
T
P
Q
V
-------
A
L
E
N-----ITEK
S
L
L
V
V
V
DTHKP
S
M
V
I
N
K
-----
E
L
LD----SAT
N
V
V
V
VDHHR
R
S
E
E
FVG----S
P
V
L
V
Y
-IEPY-------AS
S
T
A
E
L
I
T
E
L
F
-------------EY--QP
D
------
L
E
--
Q
VG
K
I
E
A
T
A
L
-
L
S
G
I
V
V
DTK
N
F
T
L
-RTGSR-----------T-------------
F
D
A
A
S
Y
-
L
R
---------------------
S
L-----------GA--
D
-
T
I
L
----
V
Q
-
Q
F
-
L
--
K
--
E
D
I
---------------
T
T
F
T
Q
-
R
S
R
L
----
V
----
E
S
L
E
I
Y---H---D------
G
M
A
I
ATGH-E---DEE---
F
---
G
T
V
I
A
A
Q
A
A
D
T
M
L
SMEGV
Q
A
S
------
F
V
-
I
T
LRP--D--
K
L
I
G
I
S
ARSLG
Q
I
N
V
-
Q
V
I
M
E
K
-----LGGGGHL
S
N
A
A
T
QLK
D
-
V
T
I
A
E
A
E
K
Q
L
I
S
A
I
D
A
Y
WKGET
1
PsiBlast_PDB
94.11
25%
-74
- C2 -
3W5W
3
?
A:
[4-337]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
I
A
Q
A
H
I
D
H
F
T
K
W
F
E
R
A
D
K
I
V
I
V
S
H
V
S
P
D
G
D
A
I
G
S
S
-
L
G
L
--------
Y
H
F
L
D
--
S
Q
D
K
-----------
I
V
N
V
I
-
V
-
P
----
N
-----
A
F
-
P
D
F
L
K
W
--
M
--
P
G
S
-
K
D
---
I
L
L
Y
D
R
Y
Q
E
F
-------
A
D
K
L
-----
I
M
E
A
D
V
I
C
C
L
D
F
N
A
L
K
R
I
--
D
-----
E
M
S
D
I
V
A
A
S
P
G
R
K
I
M
I
D
H
H
L
Y
P
E
D
F
C
R
-------
I
T
I
-
S
H
P
E
-------
I
S
S
T
S
E
L
V
F
R
L
I
-------------
C
R
--
M
G
Y
------
F
S
--
D
I
S
K
E
G
A
E
C
I
-
Y
T
G
M
M
T
D
T
G
G
F
T
Y
-
N
S
N
N
R
E
----------
I
-------------
Y
F
I
I
S
E
-
L
L
---------------------
S
K
-----------
G
I
--
D
-----------------
K
--
D
D
I
Y
R
K
V
Y----------
N
T
Y
S
E
S
R
L
R
L
M
G
Y
V
L
----
S
N
M
K
V
Y
---
K
---
D
YN
S
---
A
L
I
S
L
T
K
E
-
E
---
Q
G
K
---
F
---
D
Y
I
K
G
D
S
E
G
F
V
N
I
P
L
S
I
K
N
V
C
------
F
S
-
C
F
L
R
E
--
D
TE-
M
I
K
I
S
L
R
S
V
G
K
F
P
C
N
R
L
A
A
E
F
-----
F
N
G
G
G
H
L
N
A
S
G
G
E
F
Y
G
--
T
M
E
E
A
V
K
V
F
E
Q
A
L
E
K
Y
-----
2
PsiBlast_PDB
90.68
25%
-64
- C2 -
4PY9
8
?
A:
[4-337]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
I
A
Q
A
H
I
D
H
F
T
K
W
F
E
R
A
D
K
I
V
I
V
S
H
V
S
P
D
G
D
A
I
G
S
S
-
L
G
L
--------
Y
H
F
L
D
--
S
Q
D
K
-----------
I
V
N
V
I
-
V
P
N
----
A
FPDFL
K
W
M
P
G
S
K
D
I
--
L
LY
D
R
Y
-
Q
E
F
A
D
--
K
L
I
M
E
A
D
V
I
C
C
L
DFN
A
L
K
R
-----
I
D
E
M
S
D
I
V
A
A
------------------------
S
P
G
R
K
I
M
I
D
H
H
L
Y
P
E
D
F
C
-------
R
I
T
I
-
S
H
P
E
-------
I
S
S
T
S
E
L
V
F
R
L
I
-------------
C
R
--
M
G
Y
------
F
S
--
D
I
S
K
E
G
A
E
C
I
-
Y
T
G
M
M
T
D
T
G
G
F
T
Y
-
N
S
N
N
R
E
----------
I
-------------
Y
F
I
I
S
E
-
L
L
---------------------
S
K
-----------
G
I
--
D
-----------------
K
--
D
D
I
Y
R
K
V
Y----------
N
T
Y
S
E
S
R
L
R
L
M
G
Y
V
L
----
S
N
M
K
V
Y
---
K
---
D
YN
S
---
A
L
I
S
L
T
K
E
-
E
---
Q
G
K
---
F
---
D
Y
I
K
G
D
S
E
G
F
V
N
I
P
L
S
I
K
N
V
C
------
F
S
-
C
F
L
R
E
--
D
TE-
M
I
K
I
S
L
R
S
V
G
K
F
P
C
N
R
L
A
A
E
F
-----
F
N
G
G
G
H
L
N
A
S
G
G
E
F
Y
G
--
T
M
E
E
A
V
K
V
F
E
Q
A
L
E
K
Y
-----
21
HHSearch
81.93
19%
-68
- C2 -
3DEV
3
?
A:
[5-312]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
N
E
I
M
Q
R
V
K
E
----
A
E
T
I
I
I
H
R
H
V
R
P
D
P
D
A
Y
G
S
Q
-
L
G
L
--------
K
L
Y
L
E
--
R
K
F
P
-----------
E
K
N
I
Y
-
A
T
G
----
E
------
A
E
P
S
L
S
-
F
--
I
--
G
D
L
-
D
-------
E
-------------
I
D
D
S
-----
V
Y
S
D
A
L
V
I
V
C
D
T
A
N
A
P
R
I
D
D
Q
-----
R
-
Y
L
----
N
G
Q
S
L
I
K
I
D
H
H
P
A
T
D
Q
Y
-------
G
D
V
N
F
-
V
N
T
E
-------
A
S
S
T
S
E
I
I
F
D
F
I
-------------
S
H
--
F
N
D
------
L
S
--
I
I
D
E
H
V
A
R
V
L
-
Y
L
G
I
V
G
D
T
G
R
F
L
F
S
N
T
S
P
H
-----------
T
-------------
M
E
V
A
S
Q
-
L
L
---------------------
A
Y
-----------
P
F
--
N
-
H
N
A
----
E
L
N
K
M
-
S
--
E
--
K
D
P
---------------
K
L
M
P
F
-
Q
G
Y
V
----
L
----
Q
N
F
E
L
S
---
D
---
S
H-----
E
Y
C
Q
I
K
I
T
N
D
---
V
L
K
Q
F
D
I
---
Q
P
N
E
A
S
Q
F
V
N
T
V
A
D
I
S
G
L
K
I
W
------
M
F
-
G
V
-
D
E
--
G
--
D
Q
I
R
C
R
I
R
S
K
G
-
I
T
I
-
N
D
V
A
N
Q
-----
F
G
G
G
G
H
P
N
A
S
G
V
S
V
Y
S
W
D
E
F
E
E
L
A
Q
A
L
R
Q
K
L
--------
3
PsiBlast_PDB
74.69
29%
-56
- C2 -
4LS9
1
?
A:
[24-218]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
R
V
D
A
R
G
A
A
D
L
L
T
A
----
A
S
S
V
S
V
I
C
H
V
Y
P
D
A
D
T
I
G
A
G
-
L
A
L
--------
A
Q
V
L
A
--
A
S
G
K
-----------
H
-----
V
E
V
----
S
-----
F
A
T
P
--
A
Q
L
--
P
--
E
S
L
-
Q
S
L
P
G
G
-
H
L
L
V
A
P
E
A
-------
M
R
R
D
--------
A
D
L
V
V
T
V
D
I
--
P
S
--
I
N
R
LGALS
G
L
A
G
----
P
G
R
E
V
L
V
I
D
H
H
A
S
N
Q
L
F
G
T
----
A
---
N
Y
-
I
D
P
S
-------
A
D
S
T
T
M
L
V
A
E
L
L
-------------
D
A
W
G
K
P
I
------
D
E
--
K
V
----
A
H
C
L
-
Y
A
G
L
T
T
D
T
G
S
F
R
W
-
A
T
-
A
R
-----------
A
-------------
H
R
L
A
A
R
-
L
V
---------------------
E
L
-----------
G
V
--
D
-
N
A
S
----
I
S
-
R
T
-
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50
Fugue
71.12
17%
-37
- C2 -
4K70
22
?
A:
[2-483]
-
P
G
S
M
E
A
L
V
R
A
L
E
E
A
D
H
A
V
A
T
V
V
Q
S
R
I
L
E
F
F
M
-------
A
A
G
R
E
T
P
A
G
V
R
G
L
W
A
R
A
L
R
L
A
C
R
A
Y
V
E
T
G
T
-----
C
E
A
A
V
L
A
E
N
L
A
G
L
A
L
W
R
------------
L
R
H
D
W
D
E
G
T
-------
A
P
L
L
E
L
L
G
V
V
N
G
D
D
T
T
A
A
L
T
E
A
------------------------------
G
L
R
T
S
A
E
F
G
P
D
A
M
F
R
----
L
V
S
E
W
C
A
A
F
D
E
A
L
A
G
A
R
S
----------
A
D
D
V
L
A
A
P
R
V
V
P
P
E
Q
T
A
R
A
L
V
Q
P
R
F
A
-
T
L
Y
D
M
D
F
-
V
Q
D
G
L
R
Y
V
A
--
Q
H
T
N
W
A
L
P
L
A
L
A
V
R
Q
M
Q
------
N
E
--
G
L
K
P
L
T
R
A
L
F
A
L
T
I
A
D
E
F
-------------
F
H
D
R
Q
N
P
T
L
R
E
Q
F
A
E
A
A
R
A
V
D
E
A
A
L
V
P
V
G
E
----
V
N
A
T
------------
P
R
T
A
-
V
E
V
--------
R
V
S
A
A
--
L
A
H
G
-----------
D
A
Y
V
R
E
L
R
P
----
G
-----
T
----------------------
V
A
R
R
L
R
T
D
Q
G
-------
V
L
A
L
-----
L
D
P
G
A
Q
A
V
H
V
A
A
A
A
D
-------------
L
D
----
H
-
T
Q
V
D
A
T
G
V
W
E
A
V
Q
A
-------------------------
S
A
S
P
L
Q
V
V
E
A
L
V
-------------
T
A
--
G
F
T
------
R
R
--
H
C
D
L
L
E
R
A
V
L
------------------
D
R
-----------
A
-------------
P
R
L
T
D
A
-
Q
R
---------------------
A
V
-----------
G
C
----
T
A
V
----
V
G
-
G
V
-
V
--
H
--
R
L
L
---------------
D
D
Y
G
P
-
G
L
D
Y
----
V
----
R
A
Y
T
D
V
---
A
---
D
------
T
L
E
P
L
Y
G
D
-
V
---
T
A
A
---
L
---
G
-----------
L
P
E
K
G
V
E
H
V
------
V
R
-
H
C
M
A
P
--
R
--
P
P
T
E
H
V
G
A
A
R
A
A
L
L
R
-
E
V
A
A
A
E
-----
R
R
A
G
L
A
H
S
A
A
R
E
A
L
N
T
-
W
L
A
F
R
A
Q
S
R
W
G
L
----------
22
HHSearch
70.60
17%
-53
- C2 -
2HAW
9
PPAC_BACSU
A:
[2-280]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
K
I
L
I
F
G
H
Q
N
P
D
T
D
T
I
C
S
A
-
I
A
Y
--------
A
D
L
K
N
--
K
L
G
F
-----------
N
A
E
P
V
-
R
L
G
----
Q
------
V
N
G
E
T
Q
Y
A
--
L
--
D
Y
F
-
K
Q
E
S
---
P
R
L
V
E
------------
T
A
-----
A
N
E
V
N
G
V
I
L
V
D
H
N
E
R
Q
Q
S
I
K
-------
D
I
E
----
E
V
Q
V
L
E
V
I
D
H
H
R
I
A
N
F
E
T
A
----
E
P
L
Y
-
Y
-
R
A
E
P
-------
V
G
C
T
A
T
I
L
N
K
M
Y
-------------
K
E
--
N
N
--------
V
--
K
I
E
K
E
I
A
G
L
M
-
L
S
A
I
I
S
D
S
L
L
F
K
S
P
T
C
T
D
Q
-----------
D
-------------
V
A
A
A
K
E
-
L
A
---------------------
E
I
A
----------
G
V
--
D
-
A
E
E
----
Y
G
L
N
M
-
L
--
K
A
G
A
D
L
---------------
S
K
K
T
--
V
E
E
L
----
I
S
---
L
D
A
K
E
F
---
T
L
GS
K
------
K
V
E
I
A
Q
V
N
T
V
---
D
I
E
D
V
K
K
---
R
Q
A
E
L
E
A
V
I
S
K
V
V
A
E
K
N
L
D
L
F
------
L
L
-
V
I
-
T
D
IL
E
--
N
D
S
L
A
L
A
I
G
N
E
---
A
-
A
K
V
E
K
A
-----
F
N
V
------------------------------------
23
HHSearch
67.44
17%
-42
- C2 -
2EB0
2
PPAC_METJA
A:
[2-306]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
Y
V
V
G
H
K
N
P
D
T
D
S
I
A
S
A
-
I
V
L
--------
A
Y
F
L
D
--
C
Y
P
A
-----------
R
------
L
G
----
D
------
I
N
P
E
T
E
F
V
--
L
--
R
K
F
-
G
V
M
E
---
P
E
L
I
E
-------------------
S
A
K
G
K
E
I
I
L
V
D
H
S
E
K
S
Q
S
F
D
D
-------
L
E
----
E
G
K
L
I
A
I
I
D
H
H
K
V
G
L
T
T
-
T
----
E
P
I
L
Y
Y
-
A
K
P
--------
V
G
S
T
A
T
V
I
A
E
L
Y
-------------
F
K
--
D
A
I
DLIGGK
K
K
--
E
L
K
P
D
L
A
G
L
L
-
L
S
A
I
I
S
D
T
V
L
F
K
S
P
T
T
T
D
L
-----------
D
-------------
K
E
M
A
K
K
-
L
A
---------------------
E
I
A
----------
G
I
--
S
N
I
E
E
----
F
G
M
E
I
-
L
--
K
A
K
S
V
V
---------------
G
K
L
K
P
-
E
E
I
I
----
N
----
M
D
F
K
N
F
---
D
F
NG
K
------
K
V
G
I
G
Q
V
E
V
I
---
D
V
S
E
V
E
S
---
K
K
E
D
I
Y
K
L
L
E
E
K
L
K
N
E
G
Y
D
L
I
------
V
F
-
L
I
-
T
D
IM
K
--
E
G
S
E
A
L
V
V
G
N
K
-----
E
M
F
E
K
A
-----
F
---
V
--
E
G
N
S
V
F
L
E
G
--
V
M
S
-
R
K
K
Q
V
V
P
P
L
E
R
A
Y
N
---
4
PsiBlast_PDB
66.81
24%
-65
- C2 -
3DEV
2
?
A:
[4-178]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
F
N
E
I
M
Q
R
V
K
E
----
A
E
T
I
I
I
H
R
H
V
R
P
D
P
D
A
Y
G
S
Q
-
L
G
L
--------
K
L
Y
L
E
R
K
F
P
E
K
-----------
N
I
Y
A
T
--------
G
-----
E
A
E
P
S
L
S
F
I
G
D
L
--
D
E
I
-
D
D
-----------------------
S
-----
V
Y
S
D
A
L
V
I
V
C
D
T
A
N
A
P
R
I
D
D
Q
-----
R
Y
L
N
----
G
Q
S
-
L
I
K
I
D
H
H
P
A
T
D
Q
Y
-
G
----
D
V
N
F
V
N
-
T
E
---------
A
S
S
T
S
E
I
I
F
D
F
I
-------------
S
H
--
F
N
D
------
L
S
--
I
I
D
E
H
V
A
R
V
L
-
Y
L
G
I
V
G
D
T
G
R
F
L
F
S
N
T
S
P
H
-----------
T
-------------
M
E
V
A
S
Q
-
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
66.13
18%
-56
- C2 -
1I74
5
PPAC_STRMU
A:
[1-309]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
I
L
V
F
G
H
Q
N
P
D
S
D
A
I
G
S
S
M
A
-
Y
--------
A
Y
L
K
R
--
Q
L
G
V
-----------
D
A
Q
A
V
-
A
-
L
----
G
-----
N
P
N
E
E
T
A
F
V
--
L
--
D
Y
F
G
I
Q
A
P
P
V
V
K
S
A
Q
A
E
G
A
--------------------
K
Q
V
I
L
T
D
H
N
E
F
Q
Q
S
I
A
D
-------
I
R
----
E
V
E
V
V
E
V
V
D
H
H
R
V
A
N
F
E
T
A
----
N
P
L
--
Y
M
R
L
E
P
-------
V
G
S
A
S
S
I
V
Y
R
L
Y
-------------
K
E
--
N
---------
G
--
V
A
I
P
K
E
I
A
G
V
M
L
S
G
L
I
S
D
T
L
L
L
K
S
P
T
T
H
A
S
-----------
D
-------------
P
A
V
A
E
D
-
L
A
---------------------
K
I
A
GV--------
D
L
--
Q
-
E
Y
G
----
L
A
M
L
K
-
A
--
G
--
T
N
L
---------------
A
S
K
T
A
-
A
Q
L
V
----
D
----
I
D
A
K
T
F
---
E
L--
N
------
G
S
Q
V
R
V
A
Q
-
V
---
N
T
V
---
D
---
I
N
E
V
L
E
R
Q
N
E
I
E
E
A
I
K
A
S
Q
A
A
N
GYS
D
F
V
L
M
I
T
D
I
L
--
N
--
S
N
S
E
I
L
A
L
G
N
N
T
D
K
V
-
E
A
A
F
----------
N
F
T
L
K
N
N
H
A
F
L
A
G
-
A
--
V
S
R
K
K
Q
V
V
P
Q
L
T
E
S
F
N
G
--
48
Fugue
64.46
18%
-48
- C2 -
1K20
5
PPAC_STRGC
A:
[1-310]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
K
I
L
V
F
G
H
Q
N
P
D
S
D
A
I
G
S
S
-
Y
A
F
--------
A
Y
L
A
R
--
E
A
Y
G
-----------
L
D
T
E
A
-
V
A
L
----
G
-----
E
P
N
E
E
T
A
F
V
--
L
--
D
Y
F
-----
G
V
A
A
P
R
V
I
T
S
A
-------
K
A
E
G
-----
A
---
E
Q
V
I
L
T
D
H
N
E
F
Q
Q
S
V
A
D
-------
I
A
----
E
V
E
V
Y
G
V
V
D
H
H
R
V
A
N
F
E
T
A
----
N
P
L
Y
M
R
-
L
E
P
--------
V
G
S
A
S
S
I
V
Y
R
M
F
-------------
K
E
--
H
S
--------
V
--
A
V
S
K
E
I
A
G
L
M
-
L
S
G
L
I
S
D
T
L
L
L
K
S
P
T
T
H
P
T
-----------
D
-------------
K
A
I
A
P
E
-
L
A
---------------------
E
L
A
----------
G
V
--
N
-
L
E
E
----
Y
G
-
L
A
-
M
--
L
--
K
A
G
---------------
T
N
L
A
S
-
K
S
A
E
----
E
L
I
D
I
D
A
K
T
F
E
---
L
---
N
------
G
N
N
V
R
V
A
Q
-
V
---
N
T
V
---
D
---
I
A
E
V
L
E
R
Q
A
E
I
E
A
A
I
E
K
A
I
A
D
N
GYS--
D
F
-
V
L
M
I
T
--
D
--
I
I
N
S
N
S
E
I
L
A
I
G
S
N
M
-
D
K
V
E
A
A
-----
F
N
F
--
V
L
E
N
N
H
A
F
L
A
G
-
A
--
V
S
R
K
K
Q
V
V
P
Q
L
T
E
S
F
N
A
--
26
HHSearch
63.87
14%
-54
- C2 -
2QB7
8
PPX1_YEAST
A:
[26-324]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
----
D
V
L
T
I
C
V
G
N
E
S
A
D
M
D
S
I
A
S
A
-
I
T
Y
--------
S
Y
C
Q
Y
--
I
Y
N
E
G
TYSEE
K
K
K
G
S
F
I
V
P
I
-
I
D
I
PRED
L
-----
S
L
R
R
D
V
M
Y
V
--
L
--
E
K
L
-
K
I
K
E
---
E
E
L
F
F
I
E
D
-------
L
K
S
L
K
Q
NVS
Q
G
T
E
L
N
S
Y
L
V
D
N
N
D
T
P
K
N
L
K
------
N
-
Y
-----
I
D
N
V
V
G
I
I
D
H
H
F
D
L
Q
K
H
L
D
-----
A
E
P
R
I
-
V
K
V
--------
S
G
S
C
S
S
L
V
F
N
Y
W
-------------
Y
E
--
K
L
Q
G-----
D
R
--
E
V
V
M
N
I
A
P
L
L
-
M
G
A
I
L
I
D
T
S
N
M
R
R
-
K
V
E
E
S
-----------
D
-------------
K
L
A
I
E
R
-
C
Q
---------------------
A
V
L
S
GAVNEVSA
Q
G
L
E
-
D
-
S
S
E
----
F
Y
K
E
I
-
K
S
R
K
--
N
D
I
---------------
K
G
F
S
V
-
S
D
I
L
----
K
----
K
D
Y
K
Q
F
---
N
F
Q
-
G
KGHKGL
E
I
G
L
S
S
I
V
-
K
R
M
S
W
L
F
---
N
E
H
G
G
E
A
D
F
V
N
Q
C
R
R
F
Q
A
E
R
G
L
D
V
L
------
V
L
-
L
T
--------------------------------------------------------------------------
20
PsiBlast_PDB
63.37
21%
-22
- C2 -
1K23
2
PPAC_BACSU
A:
[2-219]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
K
I
L
I
F
G
H
Q
N
P
D
T
D
T
I
C
S
A
-
I
A
Y
--------
A
D
L
K
N
--
K
L
G
F
-----------
N
A
-----
E
P
V
R
L-
G
-----
Q
V
N
G
E
T
Q
Y
A
--
L
--
D
Y
F
-
K
Q
E
--------
S
P
R
L
-------
V
E
T
A
-----
A
N
E
V
N
G
V
I
L
V
D
H
N
E
R
Q
Q
S
I
K
D
-------
I
E
----
E
V
Q
V
L
E
V
I
D
H
H
R
I
A
N
F
E
T
A
----
E
P
L
Y
Y
R
-
A
E
P
--------
V
G
C
T
A
T
I
L
N
K
---------------
M
Y
--
K
E
N
------
N
V
--
K
I
E
K
E
I
A
G
L
M
-
L
S
A
I
I
S
D
S
L
L
F
K
S
-
P
T
C
T
D
-----------
Q
D
V
A
A
A
K
E
L
A
E
I
A
G
V
D
A
E
E
Y
G
L
N
---------------------
M
L
-----------
K
A
--
G
-
A
D
L
SKKT
V
E
-
E
L
-
I
--
S
--
L
D
A
---------------
K
E
F
T
L
-
G
S
K
K
----
V
----
E
I
A
Q
V
------------------------------------------------------------------------------------------------------------------------------------------------
24
HHSearch
62.66
21%
-50
- C2 -
1WPN
5
PPAC_BACSU
A:
[2-185]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
K
I
L
I
F
G
H
Q
N
P
D
T
D
T
I
C
S
A
-
I
A
Y
--------
A
D
L
K
N
--
K
L
G
F
-----------
N
A
E
P
V
-
R
L
G
----
Q
------
V
N
G
E
T
Q
Y
A
--
L
--
D
Y
F
-
K
Q
E
S
---
P
R
L
V
E
------------
T
A
-----
A
N
E
V
N
G
V
I
L
V
D
H
N
E
R
Q
Q
S
I
K
-------
D
I
E
----
E
V
Q
V
L
E
V
I
D
H
H
R
I
A
N
F
E
T
A
----
E
P
-
L
Y
Y
-
R
A
E
P
-------
V
G
C
T
A
T
I
L
N
K
M
Y
-------------
K
E
--
N
N
--------
V
--
K
I
E
K
E
I
A
G
L
M
-
L
S
A
I
I
S
D
S
L
L
F
K
S
P
T
C
T
D
Q
-----------
D
-------------
V
A
A
A
K
E
-
L
A
---------------------
E
I
A
----------
G
V
--
D
-
A
E
E
----
Y
G
L
N
M
-
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
59.76
15%
-60
- C2 -
2ZXR
1
RECJ_THET8
A:
[62-422]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
L
L
E
E
A
L
R
Q
----
G
K
R
I
R
V
H
G
D
Y
--
D
A
D
G
L
T
G
T
-
A
I
L
--------
V
R
G
L
A
--
A
L
G
A
-----------
D
V
H
P
F
-
I
P
---------------------------------------------------------------
S
D
L
F
L
T
V
D
C
-----------------------
G
V
E
V
I
V
T
D
H
H
T
---------------
L
V
-
V
H
P
A
LTPDLK
E
K
P
T
G
A
G
V
A
F
L
L
L
-------------
W
A
--
L
H
E
------
R
L
GL
P
P
P
L
E
Y
A
D
L
A
-
A
V
G
T
I
A
D
V
A
P
L
W
G
-
W
N
R
A
L
V
K
E
G
L
A
R
IPAS
S
-------------
W
V
G
L
R
L
-
L
A
E
A
V
GYTGK
A
V
E
V
A
F
R
I
A
P
R
I
N
A
A
-----------
S
R
L
G
E
-
A
E
K
----
A
L
-
R
L
L
L
--
T
--
D
D
A
A
E
A
Q
A
L
V
G
E
L
H
R
L
N
A
R
R
Q
T
L
-
E
E
A
M
----
L
----
R
K
L
L
P
Q
ADP
E
---
A
------
K
A
I
V
-
L
L
D
------
P
E
---
G
---
H
P
G
V
M
G
I
V
A
S
R
I
L
E
A
T
L
R
-
P
V
------
F
L
-
V
A
-
Q
--------
G
K
G
T
V
R
S
L
A
P
I
S
A
-
V
E
A
L
R
S
A
EDLL
L
R
Y
G
G
H
K
E
A
A
G
F
A
M
D
E
-
A
L
F
P
A
F
K
A
R
V
E
A
Y
A
A
R
F
P
----
52
Fugue
58.05
12%
-21
- C2 -
1CWY
-
MALQ_THETH
A:
[1-500]
-----------------------------------
M
E
L
P
R
A
F
G
L
L
L
H
P
T
S
L
P
G
P
Y
G
V
G
-
V
L
G
R
E
A
R
D
F
L
R
F
L
K
E
A
G
G
R
Y
W
Q
V
L
P
L
G
P
T
G
Y
G
D
S
P
Y
Q
S
F
S
A
F
A
G
N
P
Y
L
I
D
L
R
P
L
A
E
R
G
Y
V
R
L
E
D
P
G
F
P
Q
G
R
V
D
Y
G
L
L
Y
A
W
K
W
P
A
L
K
E
A
F
R
G
F
K
E
K
A
S
P
E
E
R
E
A
F
A
A
F
R
E
R
E
A
W
W
L
E
D
Y
A
L
F
M
A
L
K
G
A
H
GGL
P
W
N
R
W
P
L
P
L
R
K
R
E
E
K
A
L
R
E
A
K
S
A
-----------
L
A
E
E
V
A
F
H
A
F
T
Q
W
L
F
F
R
Q
W
G
-
A
L
K
A
E
A
E
A
-------------
L
G
I
R
I
I
G
D
M
P
I
F
V
A
E
------
D
S
A
E
V
W
A
H
P
E
W
F
H
L
D
--------------
E
E
G
R
P
T
V
V
A
G
V
P
P
D
Y
F
S
E
T
G
Q
R
W
G
N
P
L
Y
R
W
D
V
L
E
R
E
----
G
F
S
F
W
I
R
R
L
E
K
A
L
E
L
F
------
H
L
--------
V
R
I
D
H
--
F
R
G
F
-----------
E
A
Y
W
E
-
I
P
A
----
S
-----
C
P
T
A
--------------------------
V
E
G
-------
R
W
V
K
-----
A
P
G
E
K
L
F
Q
K
I
Q
E
V
F
G
E
V
P
V
L
A
-----
E
--
D
----
L
G
V
I
T
P
E
V
E
A
L
R
D
R
F
G
L
P
G
----
M
K
V
L
Q
F
-
A
F
D
D
-------
G
M
E
N
P
F
L
P
H
N
----------------
Y
--
P
A
H
----------------------
G
R
V
V
V
Y
T
G
T
H
D
N
-
D
T
T
L
G
-----------
W
-------------
Y
R
T
A
T
------------------------------------------------------
P
H
-
E
--
K
--
A
F
M
---------------
A
R
Y
L
A
-
D
W
G
I
----
T
----
F
R
---------------------------
E
---
E
E
E
---
V
---
P
W
A
L
M
H
L
G
M
K
S
-----------------------
V
--
A
--
R
L
A
V
Y
P
V
Q
D
V
L
A
L
G
S
-
E
A
R
M
N
Y
-----
P
G
R
P
S
G
N
W
A
W
R
L
L
P
G
E
-
L
S
-
P
E
H
G
A
R
L
R
A
M
A
E
A
T
E
R
L
--
28
HHSearch
57.48
22%
-77
- C2 -
3EZU
-
?
A:
[211-342]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
N
V
G
I
M
L
I
D
L
D
----
Y
F
K
L
V
G
-----
Q
T
G
D
R
I
L
Q
L
V
A
E
T
I
T
S
H
L
R
-
R
S
D
V
V
G
R
Y
D
G
D
E
F
V
V
Y
L
S
P
V
E
P
A
-
S
L
R
T
V
A
E
N
L
R
R
S
I
E
E
E
S
---
A
R
M
V
P
V
T
A
S
I
G
V
A
Q
G
I
L
G
TD
V
D
G
G
I
E
E
L
V
R
L
A
D
E
C
L
M
Q
A
K
Y
T
G
K
N
K
V
V
V
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
56.87
20%
-21
- C2 -
1WPN
5
PPAC_BACSU
A:
[2-166]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
K
I
L
I
F
G
H
Q
N
P
D
T
D
T
I
C
S
A
-
I
A
Y
--------
A
D
L
K
N
--
K
L
G
F
-----------
N
A
-----
E
P
V
R
L-
G
-----
Q
V
N
G
E
T
Q
Y
A
--
L
--
D
Y
F
-
K
Q
E
--------
S
P
R
L
-------
V
E
T
A
-----
A
N
E
V
N
G
V
I
L
V
D
H
N
E
R
Q
Q
S
I
K
D
-------
I
E
----
E
V
Q
V
L
E
V
I
D
H
H
R
I
A
N
F
E
T
A
----
E
P
L
Y
Y
R
-
A
E
P
--------
V
G
C
T
A
T
I
L
N
K
M
---------------
Y
--
K
E
N
------
N
V
--
K
I
E
K
E
I
A
G
L
M
-
L
S
A
I
I
S
D
S
L
L
F
K
S
-
P
T
C
T
D
-----------
Q
-------------
D
V
A
A
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
55.90
24%
-49
- C2 -
2EB0
2
PPAC_METJA
A:
[3-158]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
V
V
G
H
K
N
P
D
T
D
S
I
A
S
A
-
I
V
L
A
Y
F
L
D
C
Y
P
A
R
L
G
D
--
I
N
P
E
-----------
T
E
F
V
L
-
R
K
F
----
G
-----
V
M
E
P
E
L
-----------------------------------
I
E
S
-----
A
K
G
K
E
I
I
L
V
D
H
S
E
K
S
Q
S
F
D
D
--------
L
E
----
E
G
K
L
I
A
I
I
D
H
H
K
-----
V
G
LTTT
E
P
I
L
Y
Y
-
A
K
P
--------
V
G
S
T
A
T
V
I
A
E
L
Y
F
K
DAIDLIGGKK
K
E
L
--
K
P
D
------
L
---------
A
G
L
L
-
L
S
A
I
I
S
D
T
V
L
F
K
S
-
P
T
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
HHSearch
55.61
21%
-60
- C2 -
3ICL
3
?
A:
[28-162]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
N
P
V
V
L
L
F
L
D
V
D
----
N
F
K
S
I
N
D
S
L
G
H
L
V
G
D
R
L
L
R
A
T
A
E
R
I
R
T
A
V
R
-
D
G
D
T
V
A
R
I
G
G
D
K
F
T
I
L
L
N
G
A
K
D
T
L
N
G
A
L
V
A
Q
K
I
L
D
G
L
A
Q
P
F
V
F
G
A
Q
Q
I
V
I
S
V
S
I
G
I
A
V
S
P
ADG---
E
T
M
E
Q
L
L
R
N
A
D
T
A
M
Y
H
A
K
S
R
G
K
N
N
Y
Q
F
F
S
P
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
55.09
20%
-27
- C2 -
2HAW
9
PPAC_BACSU
A:
[2-150]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
K
I
L
I
F
G
H
Q
N
P
D
T
D
T
I
C
S
A
-
I
A
Y
--------
A
D
L
K
N
--
K
L
G
F
-----------
N
A
-----
E
P
V
R
L-
G
-----
Q
V
N
G
E
T
Q
Y
A
--
L
--
D
Y
F
-
K
Q
E
--------
S
P
R
L
-------
V
E
T
A
-----
A
N
E
V
N
G
V
I
L
V
D
H
N
E
R
Q
Q
S
I
K
D
-------
I
E
----
E
V
Q
V
L
E
V
I
D
H
H
R
I
A
N
F
E
T
A
----
E
P
L
Y
Y
R
-
A
E
P
V
-------
G
-
C
T
A
T
I
L
N
K
M
---------------
Y
--
K
E
N
------
N
V
--
K
I
E
K
E
I
A
G
L
M
-
L
S
A
I
I
S
D
S
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------