@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0084: (2016-03-12 )
MKKRQLGNAGLVTSELGFGCMGLNYHRGPAKDRNEMIEVVRTAMDAGITMFDTAEVYGPYTNEELVGEALVGKRNHVQIATKGGFKINGLNNEVDSRPESIKAAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLSEASAKTIRRAHKVEPLAAVESEYSIWWREAEKEVFPVLEELGIGLVAYSPLGRGYLTGKLDINADFNANDNRGGLPRFQKEAMEANQVLLDFMKEIADEQNVTTAQLALAWILDQKPWIVPIPGTTRPSRIEENIASTEIHFDDGARQKIADALSQIEIVGDRYSAAENKRIGK

Atome Classification :

(27 SA) .........10...--.....20....-.--.-..30........40........50........-------60-...------.----.....70-..----...---.---...80...--...-..90---..-.-----.--...---..100.......110.......120.......-----------------130.......140.......150..------...----..160....------.-----..170.......180..-..-...190.......200.......210.-......220...---------.----...230.......240..-......250..--.---.....260.......270---.........280.......290-.--......300.......310.......320.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKKRQLGNAGLVTS--ELGFGCMGLNY-H--R-GPAKDRNEMIEVVRTAMDAGITMFDTAEVYGP-------Y--TNE------E----LVGEAL--VG----KRN---H---VQIATKGG--FKI-NGL----NN-E-----V--DSR---PESIKAAVEGSLKRLKTDYIDLYYIHRIDPSI-----------------PIEEVAGTIQNLKQEGKILHWGLSE------ASA----KTIRRAHKV------E-----PLAAVESEYSIWWREAE-KE-VFPVLEELGIGLVAYSPLGRGYLTGKL-DINADFNANDNR---------G----GLPRFQKEAMEANQV-LL-DFMKEIAD-EQ--N---VTTAQLALAWILDQKP-----WIVPIPGTTRPSRIEENIASTE-I--HFDDGARQKIADALSQIEIVGDRYSAAENKRIGK
106 HHSearch 90.7834% -81 - C6 -1PYF IOLS_BACSU A:[2-310] -KKAKLGKSDLQVF--PIGLGTNAVGG-HNLY-PN-LNEETGKELVREAIRNGVTMLDTAYIYGI-------G--RSE------E----LIGEVL--REF---NRE---D---VVIATKAA--HRK-QGN----DF-V-----F--DNS---PDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT-----------------PKDEAVNALNEMKKAGKIRSIGVSN------FSL----EQLKEANKD------G-----LVDVLQGEYNLLNREAE-KT-FFPYTKEHNISFIPYFPLVSGLLAGKY-TEDTTFPEGDLR---------N----EQEHFKGERFKENIR-KV-NKLAPIAE-KH--N---VDIPHIVLAWYLARPE-----IDILIPGAKRADQLIDNIKTAD-V--TLSQEDISFIDKLFA-------------------
1 PsiBlast_PDB 89.0841% -89 - C6 -3UYI - PERR_RAUSE A:[1-317] MPRVKLGTQGLEVS--KLGFGCMGLSG---------LPEEQGIAVIKEAFNCGITFFDTSDIYGE-------NG-SNE------E----LLGKAL--KQL---PRE---K---IQVGTKFG--IHE-IGF----SGVK-----A--KGT---PDYVRSCCEASLKRLDVDYIDLFYIHRIDTTV-----------------PIEITMGEL-KLVEEGKIKYVGLSE------ASP----DTIRRAHAV------H-----PVTALQIEYSLWTRDIE-DE-IVPLCRQLGIGIVPYSPIGRGLFAGKA--IKES--------------------------------KNKQ-IY-YRIEALSQ-KH--G---CTPVQLALAWVLHQGE-----DVVPIPGTTKIKNLHNNVGALK-V--KLTKEDLKEISDAVPLDEVAGE------------
105 HHSearch 88.0432% -77 - C6 -1PZ1 GS69_BACSU A:[1-314] MEYTSIADTGIEAS--RIGLGTWAIGGTM--W-GG-TDEKTSIETIRAALDQGITLIDTAPAYGF-------G--QSE------E----IVGKAI--KEYM--KRD---Q---VILATKTA--LDW-KNN----QL-F-----R--HAN---RARIVEEVENSLKRLQTDYIDLYQVHWPDPLV-----------------PIEETAEVMKELYDAGKIRAIGVSN------FSI----EQMDTFRAV------A-----PLHTIQPPYNLFEREME-ES-VLPYAKDNKITTLLYGSLCRGLLTGKM-TEEYTFEGDDLR---------N----HDPKFQKPRFKEYLS-AV-NQLDKLAKTRY--G---KSVIHLAVRWILDQPG-----ADIALWGARKPGQLEALSEITG-W--TLNSEDQKDINTILENTI----------------
2 PsiBlast_PDB 87.7034% -78 - C6 -1PYF IOLS_BACSU A:[2-295] -KKAKLGKSDLQVF--PIGLGTNAVGG-H--NLYPNLNEETGKELVREAIRNGVTMLDTAYIYGI-------G--RSE------E----LIGEVL--REF---NRE---D---VVIATKAA--HRK-QGN----DF-V-----F--DNS---PDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT-----------------PKDEAVNALNEMKKAGKIRSIGVSN------FSL----EQLKEANKD------G-----LVDVLQGEYNLLNREAE-KT-FFPYTKEHNISFIPYFPLVSGLLAGKY-TEDTTFPEGDLR---------N----EQEHFKGERFKENIR-KV-NKLAPIAE-KH--N---VDIPHIVLAWYLARPE-----IDILIPGAKRADQLIDNIKTAD-V------------------------------------
5 PsiBlast_PDB 85.1334% -85 - C6 -1PZ1 GS69_BACSU A:[6-288] -----IADTGIEAS--RIGLGTWAIGG-T--M-WGGTDEKTSIETIRAALDQGITLIDTAPAYGF-------G--QSE------E----IVGKAIKEYM----KRD---Q---VILATKTA----L-DWK----NN-Q-----LFRHAN---RARIVEEVENSLKRLQTDYIDLYQVHWPDPLV-----------------PIEETAEVMKELYDAGKIRAIGVSN------FSI----EQMDTFRAV------A-----PLHTIQPPYNLFEREME-ES-VLPYAKDNKITTLLYGSLCRGLLTGKM-TEEYTFEGDDLR---------N----HDPKFQKPRFKEYLS-AV-NQLDKLAK-TRY-G---KSVIHLAVRWILDQPG-----ADIALWGARKPGQLE---------------------------------------------
3 PsiBlast_PDB 84.8834% -77 - C6 -1PZ0 IOLS_BACSU A:[2-295] -KKAKLGKSDLQVF--PIGLGTNAVGG-H--NLYPNLNEETGKELVREAIRNGVTMLDTAYIYGI-------G--RSE------E----LIGEVL--REF---NRE---D---VVIATKAA--HRK-QGN----DF-V-----F--DNS---PDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT-----------------PKDEAVNALNEMKKAGKIRSIGVSN------FSL----EQLKEANKD------G-----LVDVLQGEYNLLNREAE-KT-FFPYTKEHNISFIPYFPLVSGLLAGKY-TEDTTFPEGDLR---------N----EQEHFKGERFKENIR-KV-NKLAPIAE-KH--N---VDIPHIVLAWYLARPE-----IDILIPGAKRADQLIDNIKTAD-V------------------------------------
111 HHSearch 82.6929% -80 - C6 -3N6Q GPR_ECOLI A:[13-336] MQYRYCGKSGLRLP--ALSLGLWHNFG-------HVNALESQRAILRKAFDLGITHFDLANNYGPPP-----G--SAE------E----NFGRLL--REDFAAYRD---E---LIISTKAG--YDM-WPG----PY-G-----S--GGS---RKYLLASLDQSLKRMGLEYVDIFYSHRVDENT-----------------PMEETASALAHAVQSGKALYVGISS------YSP----ERTQKMVELLREWK-I-----PLLIHQPSYNLLNRWVDKSG-LLDTLQNNGVGCIAFTPLAQGLLTGKY-L---------------------------------LTEANLN-SL-RLLNEMAQ-QR--G---QSMAQMALSWLLKDDR-----VTSVLIGASRAEQLEENVQALNNL--TFSTKELAQIDQHIADGE----------------
112 HHSearch 81.0726% -77 - C6 -3ERP ? A:[34-351] MEYRRCGRSGVKLP--AISLGLWHNFG-------DTTRVENSRALLQRAFDLGITHFDLANNYGPPP-----G--SAE------C----NFGRIL--QEDFLPWRD---E---LIISTKAG--YTM-WDG----PY-G-----D--WGS---RKYLIASLDQSLKRMGLEYVDIFYHHRPDPET-----------------PLKETMKALDHLVRHGKALYVGISN------YPA----DLARQAIDILEDLG-T-----PCLIHQPKYSLFERWVE-DG-LLALLQEKGVGSIAFSPLAGGQLTDRY-LN--------------------------------ITADKLE-KV-RRLNELAA-RR--G---QKLSQMALAWVLRNDN-----VTSVLIGASKPSQIEDAVGMLANR--RFSAAECAEIDAILEG------------------
12 PsiBlast_PDB 81.0627% -81 - C6 -3ERP ? A:[34-330] MEYRRCGRSGVKLP--AIS---LGLWH-N--F-GDTTRVENSRALLQRAFDLGITHFDLANNYGP-------P--PGSAECNFGR----ILQEDF--LP----WRD---E---LIISTKAG--YTMWDGP----YG-D-----W--GSR---KYLI-ASLDQSLKRMGLEYVDIFYHHRPDPET-----------------PLKETMKALDHLVRHGKALYVGISN------YPA----DLARQAIDILEDLG-T-----PCLIHQPKYSLFERWVE-DG-LLALLQEKGVGSIAFSPLAGGQLTDRY--LN--------------------------------ITADKLEKV-RRLNELAA-RR--G---QKLSQMALAWVLRNDN-----VTSVLIGASKPSQIEDAVG-----------------------------------------
108 HHSearch 80.6826% -68 - C6 -1LQA TAS_ECOLI A:[1-342] MQYHRIPHSSLEVS--TLGLGTMTFGE-------Q-NSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQG--LTE------T----YVGNWL--AKHG--SRE---K---LIIASKVS--GPS-RNNDKGIRP-D-----Q--ALD---RKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSN------ETA----FGVMRYLHLADKHDLP-----RIVTIQNPYSLLNRSFE-VG-LAEVSQYEGVELLAYSCLGFGTLTGKY-LNGAKPAG--AR---------NT---LFSRFTRYSGEQTQK-AV-AAYVDIAR-RH--G---LDPAQMALAFVRRQPF-----VASTLLGATTMDQLKTNIESLH-L--ELSEDVLAEIEAVHQVYT----------------
10 PsiBlast_PDB 80.6230% -84 - C6 -3N6Q GPR_ECOLI A:[13-312] MQYRYCGKSGLRLP--AL---SLGLWH-N--F-GHVNALESQRAILRKAFDLGITHFDLANNYGP-------PPGSAE------ENFGRLLREDF--AA----YRD---E---LIISTKAG--YDMWPGP----YG-S-----G--GSR----KYLLASLDQSLKRMGLEYVDIFYSHRVDENT-----------------PMEETASALAHAVQSGKALYVGISS------YSP----ERTQKMVEL------LREWKIPLLIHQPSYNLLNRWVD-KSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL----------------------------------LTEANLN-SL-RLLNEMAQ-QR--G---QSMAQMALSWLLKDDR-----VTSVLIGASRAEQLEENV------------------------------------------
9 PsiBlast_PDB 78.7930% -76 - C6 -4AUB GPR_ECOLI A:[33-332] MQYRYCGKSGLRLP--AL---SLGLWH-N--F-GHVNALESQRAILRKAFDLGITHFDLANNYGP-------PPGSAE------ENFGRLLREDF--AA----YRD---E---LIISTKAG--YDMWPGP----YG-S-----G--GSR----KYLLASLDQSLKRMGLEYVDIFYSHRVDENT-----------------PMEETASALAHAVQSGKALYVGISS------YSP----ERTQKMVEL------LREWKIPLLIHQPSYNLLNRWVD-KSGLLDTLQNNGVGCIAFTPLAQGLLTGK------------------------------------LTEANLN-SL-RLLNEMAQ-QR--G---QSMAQMALSWLLKDDR-----VTSVLIGASRAEQLEENV------------------------------------------
11 PsiBlast_PDB 77.8930% -79 - C6 -4AST - GPR_ECOLI A:[13-312] MQYRYCGKSGLRLP--AL---SLGLWH-N--F-GHVNALESQRAILRKAFDLGITHFDLANNYGP-------PPGSAE------ENFGRLLREDF--AA----YRD---E---LIISTKAG--YDMWPGP----YG-S-----G--GSR----KYLLASLDQSLKRMGLEYVDIFYSHRVDENT-----------------PMEETASALAHAVQSGKALYVGISS------YSP----ERTQKMVEL------LREWKIPLLIHQPSYNLLNRWVD-KSGLLDTLQNNGVGCIAFTPLAQGLLT-----------------------------------------ANLN-SL-RLLNEMAQ-QR--G---QSMAQMALSWLLKDDR-----VTSVLIGASRAEQLEENV------------------------------------------
4 PsiBlast_PDB 77.1234% -86 - C6 -3N2T - ? A:[20-290] -----------------LGTWAIGGWM-W--G-GP--DDDNGVRTIHAALDEGINLIDTAPVYGF-------G--HSE------E----IVGRAL--AE----KPN---K---AHVATKLG--LHW-VGE----DE-KNMKVFR--DSR---PARIRKEVEDSLRRLRVETIDLEQIHWPDDKT-----------------PIDESARELQKLHQDGKIRALGVSN------FSP----EQMDIFREV------A-----PLATIQPPLNLFERTIE-KD-ILPYAEKHNAVVLAYGALCRGLLTGKM-NRDTTFPKDDLR---------S----NDPKFQKPNFEKYLA-AM-DEFEKLAE-KR--G---KSVMAFAVRWVLDQGP------VIALWGARKPGQV----------------------------------------------
110 HHSearch 76.2133% -84 - C6 -1YNP ? A:[21-311] MKKRQLGTSDLHVS--ELGFGCMSLG----------TDETKARRIMDEVLELGINYLDTADLYNQ-------G--LNE------Q----FVGKAL--KG----RRQ---D---IILATKV----------------------------S---KAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD-----------------PIDETIEAFEELKQEGVIRYYGISS------IRP----NVIKEYLKR------S-----NIVSIMMQYSILDRRPE--E-WFPLIQEHGVSVVVRGPVARGLLSRRP-LPEGEGY-------------------------------LNY-RY-DELKLLRE-SLPTD---RPLHELALQYCLAHDV-----VATVAAGASSIDQVKANVQAVEAT--PLTAEERQHIQKLAKAAV----------------
113 HHSearch 74.9126% -68 - C6 -2BP1 ARK72_HUMAN A:[38-359] --------------RVASVLGTMEMGR-R-------MDAPASAAAVRAFLERGHTELDTAFMYSD-------G--QSE------T----ILGGLG--LGLGG-GDC---R---VKIATKAN--PWD-----------G-----K--SLK---PDSVRSQLETSLKRLQCPQVDLFYLHAPDHGT-----------------PVEETLHACQRLHQEGKFVELGLSN------YAS----WEVAEICTLCKSNGWI-----LPTVYQGMYNATTRQVE-TE-LFPCLRHFGLRFYAYNPLAGGLLTGKY-KYEDKDGKQPVGRFFGNSWAET----YRNRFWK---EHHFE-AIALVEKALQA-AY--GASAPSVTSAALRWMYHHSQLQGAHGDAVILGMSSLEQLEQNLAATEEG--PLEPAVVDAFNQAWHLVAHECPNYF---------
109 HHSearch 73.8826% -63 - C6 -3EAU KCAB2_RAT A:[3-324] QFYRNLGKSGLRVS--CLGLGTWVTFG-------GQITDEMAEHLMTLAYDNGINLFDTAEVYAA-------G--KAE------V----VLGNII--KKKGW-RRS---S---LVITTKIF--WGG-KA-----ET-E-----R--GLS---RKHIIEGLKASLERLQLEYVDVVFANRPDPNT-----------------PMEETVRAMTHVINQGMAMYWGTSR------WSS----MEIMEAYSVARQFNLI-----PPICEQAEYHMFQREKVEVQ-LPELFHKIGVGAMTWSPLACGIVSGKY-DSGIPPYSRASL---------KGYQWLKDKILSEEGRRQQA-KL-KELQAIAE-RL--G---CTLPQLAIAWCLRNEG-----VSSVLLGASNAEQLMENIGAIQ-VLPKLSSSIVHEIDSILGNK-----------------
123 HHSearch 73.6131% -79 - C6 -3O0K ? A:[26-282] VPTVKL-NDGNHIP--QLGYGVWQI------------SNDEAVSAVSEALKAGYRHIDTATIYG------------NE------E----GVGKAI--NGSGI-ARA---D---IFLTTKLW--NS---------------------DQG---YESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKD----------------LFMETWRAFIKLKEEGRVKSIGVSN------FRT----ADLERLIKESG----V-----TPVLNQIELHPQFQQD---E-LRLFHGKHDIATEAWSPLGQG-LLED-----------------------------------------------PTLKSIAE-KH--A---KSVAQIILRWHIETG-------NIVIPKSITPARIKENFDIFD-F--TLNGTDHDAITKL---------------------
122 HHSearch 73.1426% -81 - C6 -3UP8 ? A:[24-284] --MHAVSSNGANIP--ALGFGTFRMS------------GAEVLRILPQALKLGFRHVDTAQIYG------------NE------A----EVGEAI--QKSGI-PRA---D---VFLTTKVW--VDN---------------------YR---HDAFIASVDESLRKLRTDHVDLLLLHWPGSDV-----------------PMAERIGALNEVRNAGKVRHIGISN------FNT----TQMEEAARLSD----A-----PIATNQVEYHPYLDQT---K-VLQTARRLGMSLTSYYAMANGKVPAD-----------------------------------------------PLLTEIGG-RH--G---KTAAQVALRWLVQQQD-----V-IVLSKTATEARLKENFAIFD-F--ALTREEMAAVRELARPNG----------------
24 PsiBlast_CBE 72.9733% -98 - C6 -4XK2 ? B:[45-287] --------------------------------------------IIDICLDAGVNLFDTADVYSN-------G--ASE------S----ILGAAL--KG----RRD---K---AIVSTKLS--LRI-GEG----PN-D-----V--GSS---RHHLIAATNAALQRLDTDYIDILQLHAFDAMT-----------------PVEQVLGTLDDLVRAGKVRYIGLSN------FSGWQLMKSLAAADRLGL----Q-----RYVANQTYYSLIGRDYE-WE-LMPLGIDQGVGAIVWSPLGWGRLTGK-------------------------------PVDDERLYR----VV-DAMDEVAL-ET--G---KTLPQIALNWLL-QRP-----TVASV-------------------------------------------------------
21 PsiBlast_CBE 70.5738% -74 - C6 -1YNQ ? B:[21-225] MKKRQLGTSDLHVS--ELGFGCMSL----------GTDETKARRIMDEVLELGINYLDTADLYNQ-------G--LNE------Q----FVGKAL--KG----RRQ---D---IILATKVGNRFEQ-GKE----GW-W-----W--DPS---KAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD-----------------PIDETIEAFEELKQEGVIRYYGISS------IRP----NVIKEYLKR------S-----NIVSIMMQYSILDRRPE--E-WFPLIQEHGVSVVVRGPVARGLLS---------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 69.2338% -87 - C6 -1YNP ? A:[21-225] MKKRQLGTSDLHVS--ELGFGCMSL----------GTDETKARRIMDEVLELGINYLDTADLYNQ-------G--LNE------Q----FVGKAL--KG----RRQ---D---IILATKV----------------------------S---KAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD-----------------PIDETIEAFEELKQEGVIRYYGISS------IRP----NVIKEYLKR------S-----NIVSIMMQYSILDRRPE--E-WFPLIQEHGVSVVVRGPVARGLLS---------------------------------------------------------------------------------------------------------------------------------------------------
37 PsiBlast_CBE 49.5133% -58 - C6 -2BP1 ARK72_HUMAN C:[65-237] -------------------------------------------------LERGHTELDTAFMYSD-------G--QSE------T----ILGGLG--LG----LG-C--R---VKIATKA---------------N-P-----W--DGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGT-----------------PVEETLHACQRLHQEGKFVELGLSNYASWEVAEI----CTLCKSNGW------I-----LPTVYQGMYNATTRQVE-TE-LFPCLRHFGLRFYAYNPLAGGLLTGK-------------------------------------------------------------------------------------------------------------------------------------------------
51 PsiBlast_CBE 49.4631% -61 - C6 -1GVE ARK73_RAT A:[28-204] ---------------------------------------------VRAFLQRGHTEIDTAFVYAN-------G--QSE------T----ILGDLG--LG----LGR---SGCKVKIATKAA--PMF-GK-----------------TLK---PADVRFQLETSLKRLQCPRVDLFYLHFPDHGT-----------------PIEETLQACHQLHQEGKFVELGLSNYVSWEVAEI----CTLCKKNGW------I-----MPTVYQGMYNAITRQVE-TE-LFPCLRHFGLRFYAFNPLAGGLLTGR-------------------------------------------------------------------------------------------------------------------------------------------------
36 PsiBlast_CBE 49.4533% -56 - C6 -2BP1 ARK72_HUMAN D:[65-237] -------------------------------------------------LERGHTELDTAFMYSD-------G--QSE------T----ILGGLG--LG----LGGGDCR---VKIATKA---------------N-P-----W--DGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGT-----------------PVEETLHACQRLHQEGKFVELGLSNYASWEVAEI----CTLCKSNGW------I-----LPTVYQGMYNATTRQVE-TE-LFPCLRHFGLRFYAYNPLAGGLLTGK-------------------------------------------------------------------------------------------------------------------------------------------------
39 PsiBlast_CBE 48.4833% -56 - C6 -2BP1 ARK72_HUMAN A:[65-237] -------------------------------------------------LERGHTELDTAFMYSD-------G--QSE------T----ILGGLG--LG----LGGGDCR---VKIATKA---------------N-P-----W--DGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGT-----------------PVEETLHACQRLHQEGKFVELGLSNYASWEVAEI----CTLCKSNGW------I-----LPTVYQGMYNATTRQVE-TE-LFPCLRHFGLRFYAYNPLAGGLLTGK-------------------------------------------------------------------------------------------------------------------------------------------------
38 PsiBlast_CBE 48.0733% -58 - C6 -2BP1 ARK72_HUMAN B:[65-237] -------------------------------------------------LERGHTELDTAFMYSD-------G--QSE------T----ILGGLG--LG----LG-C--R---VKIATKA---------------N-P-----W--DGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGT-----------------PVEETLHACQRLHQEGKFVELGLSNYASWEVAEI----CTLCKSNGW------I-----LPTVYQGMYNATTRQVE-TE-LFPCLRHFGLRFYAYNPLAGGLLTGK-------------------------------------------------------------------------------------------------------------------------------------------------