@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0085: (2016-03-12 )
MKYIDYHDYMHKDAIIYAYLQNNFPYIRKRIKAWESFTLDREDILLVKSGAIFEEVNGKKKGIARCFFSKSLIFPTRDPIVLKAFETSEICFINAERAFGKLEEDQILSNFFLQIAEKNEEDMRRQAFLGTENSKNKIISTLNFLLENNKSNSKTPIFPIWLQINVLAKLANCSISTISSTVNELHAEGILDIKSSPWKLKGKEKKIEILENENQKMKLNERKHKSNVF

Atome Classification :

(20 SA) ------.........10.......--.20.----..--.....30........40-----.---...-....50....---.---.-..60.....----...70....------.--------.---..80....-....-90........100...-----...-.-110..-.....-----120......-.130......-.140....-...150-.......160........170...-....180.......190..-...--..200.......210.......220...-....-----
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------MKYIDYHDYMHKDAIIYA--YLQN----NF--PYIRKRIKAWESFTLDR-----E---DIL-LVKSGAIFEE---V---N-GKKKGIARC----FFSKSLIFP------T--------R---DPIVLKAF-ETSE-ICFINAERAFGKLEED-----QIL-S-NFFLQ-IAEKN-----EEDMRRQAF-LGTENSKNKI-ISTLNFLL-ENNKSN-SKTPIFPI-WLQINVLAKLANCSI-STISSTVNELHAEGILDIK-SSP--WKLKGKEKKIEILENENQKMKLNERKHK-SNVF-----
26 HHSearch 82.3317% -87 - C5 -2GAU - ? A:[32-230] --------------------------------------EIQPFPCKKASTVFSEGDIP--N---NLF-YLYEGKIKIL---R-------RFHISRI----VKPGQFFGM------RPYFAEE--T---CSSTAIAV-ENSK-VLAIPVEAIEALLKGN-----TSFCR-YFLKA-LAKEL-----GYAERRTVT-LTQKHVRGRL-AETLLILK-ENFGFE-NDGATLSI-YLSREELATLSNMTV-SNAIRTLSTFVSERMLALD-GKR--IKIIDCDRLQKTAR------------------------
25 HHSearch 79.8417% -97 - C5 -3IWZ - CLP_XANCP A:[33-228] --------------------------------------HSHRRRYPTRTDVFRPGDPA--G---TLY-YVISGSVSII---AEE-D-DDRELVLGY----FGSGEFVGEMGLFI-ESD------T---REVILRTR-TQCE-LAEISYERLQQLFQTSLSPDAPRILY-AIGVQ-LSKRL-----LDTTRKASR-LAFLDVTDRI-VRTLHDLS-KEPEAM-SHPQGTQL-RVSRQELARLVGCSR-EMAGRVLKKLQADGLLHAR-GKT--VVLYG---------------------------------
27 HHSearch 78.4315% -77 - C5 -3E6C ? C:[9-230] ----------DFCGAIIPDNFFPI--EKLR----NYTQMGLIRDFAKGSAVIMPGEEI--T---SMI-FLVEGKIKLD---IIF-E-DGSEKLLYY----AGGNSLIGK------LYPT-----G---NNIYATAM-EPTR-TCWFSEKSLRTVFRTD-----EDMIF-EIFKN-YLTKV-----AYYARQVAE-MNTYNPTIRI-LRLFYELC-SSQGKRVGDTYEITM-PLSQKSIGEITGVHH-VTVSRVLASLKRENILDKK-KNK--IIVYNLGELKHLSEQTS---------------------
24 HHSearch 74.9613% -91 - C5 -2OZ6 VFR_PSEAE A:[12-205] --------------------------------------HCHRRRYTAKSTIIYAG-----DRCETLF-FIIKGSVTIL---IED-D-DGREMIIGY----LNSGDFFGE------LGLFEQ---E---RSAWVRAK-VECE-VAEISYAKFRELSQQD-----SEILY-TLGSQ-MADRL-----RKTTRKVGD-LAFLDVTGRV-ARTLLDLC-QQPDAM-THPDGMQI-KITRQEIGRIVGCSR-EMVGRVLKSLEEQGLVHVK-GKT--MVVFG---------------------------------
49 Fugue 72.8915% -75 - C5 -1O3T CRP_ECOLI A:[2-200] PTLEWFLSHCHIHKYPSKSTLIHQGEKAET----LY--YIVKGSVAVLIKDEEGK-----E---MILSYLNQGDFIGE---L---G-LFEEGQER----------------------------------SAWVRAK-TACE-VAEISYKKFRQLIQVNP----DIL-M-RLSAQ-MARRL-----QVTSEKVGN-LAFLDVTGRI-AQTLLNLA-KQPDAM-THPDGMQI-KITRQEIGQIVGCSR-ETVGRILKMLEDQNLISAH-GKT--IVVYG---------------------------------
38 HHSearch 72.5312% -95 * C5 *3KCC CRP_ECOLI A:[68-257] --------------------------------------HCHIHKYPSKSTLIHQGEKA--E---TLY-YIVKGSVAVL---IKD-E-EGKEMILSY----LNQGDFIGELGLFEEGQ-------E---RSAWVRAK-TACE-VAEISYKKFRQLIQVN-----PDI-LMRLSAQ-MARRL-----QVTSEKVGN-LAFLLVTGRI-AQTLLNLA-KQPDAM-THPDGMQI-KITRQEIGQIVGCSR-ETVGRILKMLEDQNLISAH-GKT--IVVY----------------------------------
36 HHSearch 72.1116% -72 - C5 -2ZCW ? A:[6-199] ----------------------------------------ETVSFKAGDVILYPGVPGPRD---RAY-RVLEGLVRLE---AVD-E-EGNALTLRL----VRPGGFFGEEALFG-Q--------E---RIYFAEAA-TDVR-LEPLPEN-------PD-----PELLK-DLAQH-LSQGL-----AEAYRRIER-LATQRLKNRM-AAALLELS-ETPLAH-EEEGKVVL-KATHDELAAAVGSVR-ETVTKVIGELAREGYIRSG-YGK--IQLLDLKGLKELAESRG---------------------
33 HHSearch 68.7913% -77 - C5 -3B02 - ? A:[2-190] ------------------------------------------KRFARKETIYLRGEEA--R---TLY-RLEEGLVRVV---ELL-P-DGRLITLRH----VLPGDYFGEEALEG-K--------A---YRYTAEAM-TEAV-VQGLEPRAM------D-----HEALH-RVARN-LARQM-----RRVQAYEAH-LQTGELRARI-ARYLLFLA-DTPLSA-RDRQGIYV-TVSHEEIADATASIR-ESVSKVLADLRREGLIATA-YRR--VYLLDLAALEREAGS-----------------------
22 HHSearch 68.1812% -90 - C5 -3E97 ? A:[29-224] ---------------------------------------VTERNFQPDELVVEQD-----AEGEALH-LVTTGVVRVS---RVS-L---RERVLGD----IYAPGVVGETAVLAHQ--------E---RSASVRAL-TPVR-TLMLHREHFELILRRH-----PRVLW-NLAEM-LARRV-----TFLNDELIA-FG-QNTEAAL-THVFANLY-RQRLAA-GVPQPEVL-PLGTQDIMARTSSSR-ETVSRVLKRLEAHNILEVS-PRS--VTLLDLAALEALS-------------------------
47 Fugue 67.3618% -18 - C2 -3BGY MCE_MIMIV A:[12-237] ------ITIFSENEYNEIVEMLRD--YSNG----DN--LEFEVSFKN-----INY-----P---NFM-RIT--EHYIN---I---T-PENKIESNN----YLDISLIFP------D--------K---NVYRVSLF-NQEQ-IGEFITKFS---KASS-----NDI-S-RYIVS-LDPSDDIEIVYKNRGSGKL-IGIDNWAITI-KSTEEIPL-VAGKSK-ISKP-------KITGSERIMYRYK-TRYSFTINKNSRIDITDVK-SSPIIWKLMTVPSNYELELELINKIDINTLESELLNVFMIIQD
44 Fugue 66.9712% -75 - C5 -1FT9 ? A:[2-213] ------PPRFNIANVLLSPDGETF--FRGF----RS--KIHAKGSLVCTGEG-DE-----N---GVF-VVVDGRLRVY---L---V-GEEREISLF----YLTSGDMFC------M--------H---SGCLVEAT-ERTE-VRFADIRTFEQKLQTC-----PSM-A-WGLIA-ILGRA-----LTSCMRTIE-DLMFHDIKQR-IAGFFIDH-ANTTGR-QTGVIVSV-DFTVEEIANLIGSSR-QTTSTALNSLIKEGYISRQ-GRG--HYTIPNLVRLKAAA------------------------
32 HHSearch 66.5617% -78 - C5 -1ZYB ? A:[44-232] ----------------------------------------HFIKHKAGETIIKSGNPC--T---QLC-FLLKGEISIV---TNA-K-ENIYTVIEQ----IEAPYLIEPQSLFGMNT-------N---YASSYVAH-TEVH-TVCISKAFVLSDLFRY-----DIFRL-NYMNI-VSNRA-----QNLYSRLWD-EPTLDLKSKI-IRFFLSHC-EKPQ------GEKTF-KVKMDDLARCLDDTR-LNISKTLNELQDNGLIELH-RKE--ILIPDAQKLL----------------------------
1 PsiBlast_PDB 66.2926%-102 - C5 -1O5L - ? A:[29-129] ------------------------------------------------------------E---DVL-ILLEGTLKTEHVSE---N-GKTLEIDEIKPVQIIASGFIFS------SEP------R---FPVNVVAG-ENSK-ILSIPKEVFLDLLMKD-----REL-L-LFFLKDVSEHF-----RVVSEKLFF-LTTK---------------------------------------------------------------------------------------------------------------
28 HHSearch 65.7813% -83 - C5 -1FT9 ? A:[22-213] --------------------------------------GFRSKIHAKGSLVCTGEGDE--N---GVF-VVVDGRLRVY---L---VGEEREISLFY----LTSGDMFCM---------------H---SGCLVEAT-ERTE-VRFADIRTFEQKLQTC-----PSMAW-GLIAI-LGRAL-----TSCMRTIED-LMFHDIKQRI-AGFFIDHA-NTTGRQT--GVIVSV-DFTVEEIANLIGSSR-QTTSTALNSLIKEGYISRQGRGH--YTIPNLVRLKAAA-------------------------
43 Fugue 65.7414% -57 - C5 -4RFA - ? A:[10-225] ------EKLDTVLGYLKEFPDYYK--YVTK----KT--YTLNEKIIFEDE---KA-----K---SIF-FIVEGYAAVE---LEDNL-RKTNYISIF----VLPYNVLGI------D--------AFSSYPKHSITVMSESLMLYKIDADFLLNILSIK-----PDV-N-DFLLT-SIADV-----FARHYALLGMIAKTPKERIYMALENLAVEMGTEDEE-RNEIVLPN-FINQSVLARYCRTTQ-PNISNLLTELVEEEFLINK-KSP--YRIDKDSLD-----------------------------
34 HHSearch 64.8612% -80 - C5 -2BGC PRFA_LISMO A:[18-220] ---------------------------------------IKPKQFHKKELIFNQWDPQ--E---YCI-FLYDGITKLT---SIS-E-NGTIMNLQY----Y-KGAFVIMSGFID-TE-------TSV-GYYNLEVISEQAT-AYVIKINELKELLSKN-----LTHFF-YVFQT-LQKQV-----SYSLAKFND-FSINGKLGSI-CSQLLILT-YVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYK-NSC--FYVQNLDYLKRYAPK-----------------------
23 HHSearch 63.2711% -87 - C5 -3LA7 NTCA_NOSS1 A:[26-234] ------------------DKALAN--VFRQMATGAF--PPVVETFERNKTIFFPG-----DPAERVY-FLLKGAVKLS---RVY-E-AGEEITVAL----LRENSVFGV------LSLLTGNKSD---RFYHAVAF-TPVE-LLSAPIEQVEQALKEN-----PELSM-LMLRG-LSSRI-----LQTEMMIET-LAHRDMGSRL-VSFLLILC-RDFGVPCADGITIDL-KLSHQAIAEAIGSTR-VTVTRLLGDLREKKMISIH-KKK--ITVHK---------------------------------
21 HHSearch 63.2112% -89 - C5 -3DKW - ? A:[32-226] ---------------------------------------SDLVNLDKGAYVFRQG-----EPAHAFY-YLISGCVKIY---RLT-P-EGQEKILEV----TNERNTFAEAMMFM-DT-------PN--YVATAQAV-VPSQ-LFRFSNKAYLRQLQDN-----TPLAL-ALLAK-LSTRL-----HQRIDEIET-LSLKNATHRV-VRYLLTLA-AHAPG---ENCRVEI-PVAKQLVAGHLSIQP-ETFSRIMHRLGDEGIIHLD-GRE--ISILDRERLECF--------------------------
30 HHSearch 62.2514% -62 - C5 -2FMY ? A:[27-218] ---------------------------------------FREQRYSKKAILYTPNTER--N---LVF-LVKSGRVRVY---L---AYEDKEFTLAI----LEAGDIFCT---------------H---TRAFIQAM-EDTT-ILYTDIRNFQNIVVEF-----PAFSL-NMVKV-LGDLL-----KNSLTIING-LVFKDARLRL-AEFLVQAA-MDTGLKVPQGIKLEL-GLNTEEIALMLGTTR-QTVSVLLNDFKKMGILERVNQRT--LLLKDLQKLKEFSS------------------------
35 HHSearch 61.4219% -81 - C5 -1O5L - ? A:[9-129] --------------------------------------CGKVIVFRKGEIVKHQDDPI--E---DVL-ILLEGTLKTE---HVS-E-NGKTLEIDE----IKPVQIIASGFIFS-SE-------PR--FPVNVVAG-ENSK-ILSIPKEVFLDLLMKD-----RELLL-FFLKD-VSEHF-----RVVSEKLFF-LTTK---------------------------------------------------------------------------------------------------------------