@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0103: (2016-03-12 )
MTYLNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSSAMILVFGDLQNFENGEKIYGESVERGLMPAEVKEQQMAKLSQYFASIPRSEAERVVLIDGGIVAMQLMLVARAHGYDTNPIGGFERTEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA

Atome Classification :

(20 SA) .........10........20...-.....30........40........50........60.....-...70.----........80--........90-..-.....--.100........110.....----..120...-.----...130.......140.......150.......160..--.....170......-.-180.......190...--.--...200.......210
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTYLNNDFEDLMKNRRSIREYDET-VKISQEEMKAILEDAVTAPSSVNMQPWRFVVVESDAGKEKLS-SLVR-F----NTRQNESSSA--MILVFGDLQN-FE-NGEKI--YGE-SVERGLMPAEVKEQQM----AKLSQYFA-S----IPRSEAERVVLIDGGIVAMQLMLVARAHGYDTNPIGGF--ERTEVAEAFNMDPE-R-YVPVMIVSIGKAKNSG--Y--QSYRLPITDVTTFA
84 HHSearch 96.0854% -97 - C2 -3GE6 ? A:[5-212] --QTATDFMEIVKGRRSIRNYDTN-VKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSEEGKATLA-P-LAKF----NQVQVETSSA--VIAVFGDMKA-ID-QLENI--YDT-AVEKGLMPQEVRDRQV----PAIQGMYE-N----VPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGY--EKDQIAEAFGME-K-DRYVPVMLLSIGKAVDAG--Y--PSVRLPINDIADWK
1 PsiBlast_PDB 95.1751% -99 - C2 -3GE6 ? A:[4-211] -TQTATDFMEIVKGRRSIRNYDTN-VKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSEEGKATLA-PLAK-F----NQVQVETSSA--VIAVFGDMKA-ID-QLENI--YDT-AVEKGLMPQEVRDRQV----PAIQGMYE-N----VPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGY--EKDQIAEAFGMEKD-R-YVPVMLLSIGKAVDAG--Y--PSVRLPINDIADW-
83 HHSearch 89.3148% -95 * C2 *3GBH ? A:[5-213] -LTRINDFNEVLNSRKSVKVFD-ENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVQSDEMKEKVK-E-SFGF----NSRQLTTSSA--MLIIFGDLQN-YE-KAEQI--YGD-AVEQQLMTEDIKAQLL----DWILPYYK-N----LSREGMKDIVNIDSSLMAMQLMLTAKAHGYDTNPIGGF--DKENIADIIGYD-SDR-YVPVLAIAIGKKAQDA--H--DSVRLPIDDVREFL
2 PsiBlast_PDB 88.0645%-102 - C2 -3GBH ? A:[9-212] -----NDFNEVLNSRKSVKVFDEN-YKIPREEMDEIITKATKAPSSVNMQPWRIAVVQSDEMKEKVK-ESFG-F----NSRQLTTSSA--MLIIFGDLQN-YE-KAEQI--YGD-AVEQQLMTEDIKAQLL----DWILPYYK-N----LSREGMKDIVNIDSSLMAMQLMLTAKAHGYDTNPIGGF--DKENIADIIGYDSD-R-YVPVLAIAIGKKAQDA--H--DSVRLPIDDVREF-
24 PsiBlast_CBE 83.6935% -94 - C3 -4QLX ? B:[11-217] ---VNNDLADVMFNRHSVRQFDPN-VKIGRDELQKMIAEAATAPSACNLQSWHFVVVDTPEAKAKFKQAVMK-F----NYPQVDSASA--IVFIAGDTQS-HY-VYRDV--WNK-VYEDGNITKERLDQIL----GTFLPLYE-N----ATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGI--DFEKMIPTLGLDPK-R-YVPVMGIAIGKAAQEP--L--HTTRYDAKTQTDF-
21 PsiBlast_CBE 82.7435% -91 - C2 -4QLY ? D:[11-217] ---VNNDLADVMFNRHSVRQFDPN-VKIGRDELQKMIAEAATAPSACNLQSWHFVVVDTPEAKAKFKQAVMK-F----NYPQVDSASA--IVFIAGDTQS-HY-VYRDV--WNK-VYEDGNITKERLDQIL----GTFLPLYE-N----ATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGI--DFEKMIPTLGLDPK-R-YVPVMGIAIGKAAQEP--L--HTTRYDAKTQTDF-
3 PsiBlast_PDB 81.4735% -93 * C3 *4QLX ? A:[11-217] ---VNNDLADVMFNRHSVRQFDPN-VKIGRDELQKMIAEAATAPSACNLQSWHFVVVDTPEAKAKFKQAVMK-F----NYPQVDSASA--IVFIAGDTQS-HY-VYRDV--WNK-VYEDGNITKERLDQIL----GTFLPLYE-N----ATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGI--DFEKMIPTLGLDPK-R-YVPVMGIAIGKAAQEP--L--HTTRYDAKTQTDF-
4 PsiBlast_PDB 81.3435% -88 - C2 -4QLY ? A:[11-217] ---VNNDLADVMFNRHSVRQFDPN-VKIGRDELQKMIAEAATAPSACNLQSWHFVVVDTPEAKAKFKQAVMK-F----NYPQVDSASA--IVFIAGDTQS-HY-VYRDV--WNK-VYEDGNITKERLDQIL----GTFLPLYE-N----ATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGI--DFEKMIPTLGLDPK-R-YVPVMGIAIGKAAQEP--L--HTTRYDAKTQTDF-
23 PsiBlast_CBE 80.8035% -87 - C2 -4QLY ? B:[11-217] ---VNNDLADVMFNRHSVRQFDPN-VKIGRDELQKMIAEAATAPSACNLQSWHFVVVDTPEAKAKFKQAVMK-F----NYPQVDSASA--IVFIAGDTQS-HY-VYRDV--WNK-VYEDGNITKERLDQIL----GTFLPLYE-N----ATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGI--DFEKMIPTLGLDPK-R-YVPVMGIAIGKAAQEP--L--HTTRYDAKTQTDF-
22 PsiBlast_CBE 80.5835% -85 - C2 -4QLY ? C:[11-217] ---VNNDLADVMFNRHSVRQFDPN-VKIGRDELQKMIAEAATAPSACNLQSWHFVVVDTPEAKAKFKQAVMK-F----NYPQVDSASA--IVFIAGDTQS-HY-VYRDV--WNK-VYEDGNITKERLDQIL----GTFLPLYE-N----ATPDFLKFDATIDCSVVGMQLLLVARAHGYDANAFSGI--DFEKMIPTLGLDPK-R-YVPVMGIAIGKAAQEP--L--HTTRYDAKTQTDF-
86 HHSearch 78.5827% -86 - C2 -3BEM MHQN_BACSU A:[13-218] ----MAEFTHLVNERRSASNFLSG-HPITKEDLNEMFELVALAPSAFNLQHTKYVTVLDQDVKEKLK-Q-AA-N----GQYKVVSSSA--VLLVLGDKQA-YQ-QAADI--YEG-LKVLGILNKQEYDHMV----QDTVSFYE-N----RGEQFKRDEAIRNASLSAMMFMLSAAAAGWDTCPMIGF--DAEAVKRILNID-D-Q-FEVVMMITIGKEKTESRRP--RGYRKPVNEFVEYM
7 PsiBlast_PDB 76.0626% -79 - C2 -3BEM MHQN_BACSU A:[15-217] ------EFTHLVNERRSASNFLSG-HPITKEDLNEMFELVALAPSAFNLQHTKYVTVLDQDVKEKLK-QAAN------GQYKVVSSSA--VLLVLGDKQA-YQ-QAADI--YEG-LKVLGILNKQEYDHMV----QDTVSFYE-NRGEQFKRDEAIR----NASLSAMMFMLSAAAAGWDTCPMIGF--DAEAVKRILNID-D-Q-FEVVMMITIGKEKTES--RRPRGYRKPVNEFVEY-
11 PsiBlast_PDB 72.4928% -83 - C2 -1NOX NOX_THET8 A:[16-204] -------------KRRSIRRYRKD--PVPEGLLREILEAALRAPSAWNLQPWRIVVVRDPATKRALR-EAA--F----GQAHVEEAPV--VLVLYADL----E-DALAH--LDE-VIHPGVQ-GERREAQK----QAIQRAFA-A----MGQEARKAWASGQSYILLGYLLLLLEAYGLGSVPMLGF--DPERVRAILGLPSR-A-AIPAL-VALGYPAEEG--Y--PSHRLPLERVVLW-
90 HHSearch 72.4727% -83 - C2 -1NOX NOX_THET8 A:[6-205] ---PVLDAKTAALKRRSIRRYR-K-DPVPEGLLREILEAALRAPSAWNLQPWRIVVVRDPATKRALR-E-AA-F----GQAHVEEAPV--VLVLYADLED-ALAHLDEV--IHP-----GVQGE-RREAQK----QAIQRAFA-A----MGQEARKAWASGQSYILLGYLLLLLEAYGLGSVPMLGF--DPERVRAILGLP-S-R-AAIPALVALGYPAEEG--Y--PSHRLPLERVVLWR
87 HHSearch 70.8928% -81 - C2 -3GAG ? A:[2-204] ---MMNDYLNFLDGRVSVRRFDPD-AVLPNDLIKDMLEHASYAPSGNNFQPWRVVVVKNKNKQEDLK-K-LA-A----LQPQVATASA--VFLLFGDENA-YDLTWWQE--F---HVQKGIITKDEAAARA----ERIRQYFD-L----HPEDKETQGLRLDVGLFAMNLMQVVRVYGYDSVPMRGV--DFDAIKTYLDMP-N-G-WEPILMLPVGKALQAG--N--PHVRKSVAEFAEI-
5 PsiBlast_PDB 70.6729% -82 - C2 -3GAG ? A:[4-195] -----NDYLNFLDGRVSVRRFDPD-AVLPNDLIKDMLEHASYAPSGNNFQPWRVVVVKNKNKQEDLK-KLAA-L----QP-QVATASA--VFLLFGD-----E-NAYDLTWWQEFHVQKGIITKDEAAARA----ERIRQYFD-L----HPEDKETQGLRLDVGLFAMNLMQVVRVYGYDSVPMRGV--DFDAIKTYLDM-PN-G-WEPILMLPVGKALQAG--N--PHVR----------
6 PsiBlast_PDB 69.1026% -85 - C2 -2B67 ? A:[6-200] -------FLELNKKRHATKHFTDK-L-VDPKDVRTAIEIATLAPSAHNSQPWKFVVV-----REKNA-ELAK-LAYGSNFEQVSSAPV--TIALFTDTDL-AK-RARKI--------ARVGGANNFSEEQLQYFMKNLPAEFA-R----YSEQQVSDYLALNAGLVAMNLVLALTDQGIGSNIILGF--DKSKVNEVLEIE-D-R-FRPELLITVGYTDEKL--E--PSYRLPVDEI----
17 PsiBlast_PDB 68.3325%-105 - C3 -3GE5 ? A:[31-172] --------EDFFRTRRSVRKFIDR--PVEEEKLMAILEAGRIAPSAHNYQPWHFLVVREEEGRKRLA-PC---------SQQPWFPGAPIYIITLGDHQRAWK-RGA-----GD-SVD------------------------------------------IDTSIAMTYMMLEAHSLGLGCTWVCAF--DQALCSEIFDI-PS-H-MTPVSILALG-------------------------
88 HHSearch 64.5223% -78 - C2 -1ZCH NFRA2_BACSU A:[1-184] ----MNEVIKSLTDHRSIRSYT-D-EPVAQEQLDQIIEAVQSAPSSINGQQVTVITVQDKERKKKIS-E-LA-G----GQPWIDQAPV--FLLFCADFNR-AK-IALED--LH------D---------F-------KMEITN--------GLESVLVGAVDAGIALGTATAAAESLGLGTVPIGAVRGNPQELIELLELP-K-Y-VFPLSGLVIGHPADRS--A--KKPRLPQEAVNHQ-
94 HHSearch 64.1525% -68 - C2 -2B67 ? A:[4-203] -----MKFLELNKKRHATKHFT-D-KLVDPKDVRTAIEIATLAPSAHNSQPWKFVVVREKN--AELA-K-LA-YGS--NFEQVSSAPV--TIALFTDTDL-AK-RARKI--ARV-G-GANNFSEEQLQ-YF----MKNLPAEFAR----YSEQQVSDYLALNAGLVAMNLVLALTDQGIGSNIILGF--DKSKVNEVLEIE-D-R-FRPELLITVGYTDEKL--E--PSYRLPVDEIIEK-