@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0130: (2016-03-12 )
VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHVPALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQQYLSNQTYFLQISGLKYTFTDTDDLDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKANLVTAIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS

Atome Classification :

(20 SA) ------------------.........10........20........30....----.----...40........50........60-.------.--.-----......70...--.....80........90........100.......110--.--------..-....120.......130......---.140.......150.......160.......170.......180-........190.....-----....----200.......210..-.....220-.....---..230.......240-.......250.--.------------------------..---...260.....-..270......--.280.......290.......300-----------..--..-------------------.--------------...------.310.......320---..------....-...330----------------------....--...-.-.340....---------.---------.-.350--------........360---........370......-.380.......390.......400.......-----410.......420.......430.......440.......450......-.460.......470...---.---------...480-------.-----........-490.......500-----.-----........510..----.-..----..520.......530.......540-.--...--...-550.......560.------......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAA----A----DTVPIQILGINDFHGALETASKDA--S------G--S-----PIGGADYLATN--LDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGL--L--------QD-EPTMKVLQKMNFEVGTLGNHEFD---EGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKG--TNTVAEGFL--PYYVK-----EIDG----VKVGFIGIVTTEIPN-LVLANHIK-DYDFL---DEAETIVKYSAELRG-QGVNAIVVLSH--V------------------------PA---LSTGNPNTGTK-QDVAGEAANMM--TKANELDPNNSVDLVLAGHNHQ-------------YT--NG-------------------L--------------VGK------TRIVQSYNNGKA-----FS------DVTG-ELDK------------------------TTGD--FVS-P-PDAKITYN---------T---------R-SVT---------PNADITAVTE----DAKSRIEGVINETIGLA-NKDVISRDTNPDNKAIDDKESELGNMITDAQ-----RYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGN-ILQVVEMTGADILEALN---Q---------QYLS---------N-----QTYFLQIS-GLKYTFTDTDD-------L-----DHAYKVASVTTED----G-TP----LKTDQKYKVVINDFLFGGGDGFSAF-K--KAN--LVT-AIDPDTETFINYIK------DQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS
42 HHSearch 96.5028% -52 - C1 -2Z1A ? A:[28-534] ----------------------------------------------------------------FTLTLVHTNDTHAHLEPVELTL--SGE----K--T-----PVGGVARRVAL--FDRVWA----RA-----KNPLFLDAGDVFQGTLY-FNQ--Y--------RG-LADRYFMHRLRYRAMALGNHEFD---LGPGPLADFLKG-----------------ARFKVVSANVDASR--EPRLKGLFA--PYAVV-----VVGG----ERVGIIGLTTPDTRE-ISNPG--P-TVAFL---DPYESAQKAVYELLA-KGVNKIVVLSH--L------------------------GY---GED----------------LKLA--RR------LVGVQVIVGGHSHT-------------LL--GSFPHKELSPAGPYPTVVKNPE--------------GKD------VLVVQAWEWGKV-----VG------LLEV-TFDA------------------------KGE----LL-A-YKGEALLM---------T---------PEAAP---------EDFFAKEALL----AYAQPVMALMQQVIAEAKV--DLVGER----AVVRRRESNLGNLITDGM-----LWKTRN--AGTQIALQNGGGIRASIP------KGPITVGKVYEVLPFGN-TLVVMDLKGKEILAALE---N---------GVSQWEN------T-----AGRFLQVS-GLRYAFDLSRP---------------AGSRVVRVEVKTEKGY-VP----LDLEATYRVVVNNFIANGGDGFTVL-K--EAQGYRVD-TGFSDAESFMDYLK------EL----KVVEAGLEGRIEVLNEP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 93.0928% -52 - C1 -2Z1A ? A:[28-527] ----------------------------------------------------------------FTLTLVHTNDTHAHLEPVELTL--S------GEKT-----PVGGVARRVAL--FDRVW---------ARAKNPLFLDAGDVFQGTLYFNQYRGL--------AD-RYFM---HRLRYRAMALGNHEFD---LGPGPLADFLKG-----------------ARFKVVSANVDASR--EPRLKGLFA--PYAVV-----VVGG----ERVGIIGLTTPDTRE-I--SNPGP-TVAFL---DPYESAQKAVYELLA-KGVNKIVVLSH--L------------------------GYGEDLKLARRLVGVQ-VIVGGHSHTLLGSFPHKELSPAGPYPTVV--KNPE-------------GK--DV-------------------L--------------V-----------VQAWEWGKV-----VGLLEVTFDAKG-ELLA------------------------YKGEALLMT-P-EAAPEDFF---------A---------K-EA--------------LLAYAQ----PVMALMQQVIAE----A-KVDLVG-----ERAVVRRRESNLGNLITDGM-----LWKTRNAGTQI--ALQNGGGIRASIP------KGPITVGKVYEVLPFGN-TLVVMDLKGKEILAALENGVS---------QWEN---------T-----AGRFLQVS-GLRYAFDLSRP-------A-----GSRVVRVEVKTEK----GYVP----LDLEATYRVVVNNFIANGGDGFTVL-K--EAQGYRVD-TGFSDAESFMDYLK------EL----KVVEAGLEGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 89.8025% -53 - C1 -4H1S 5NTD_HUMAN A:[4-520] ------------------------------------------------------------------LTILHTNDVHSRLEQTSEDS--S------K--CVNASRCMGGVARLFTK--VQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-V--Y--------KG-AEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANIKAKGPLASQISGLYL--PYKVL-----PVGD----EVVGIVGYTSKETP---FLSNPGT-NLVFE---DEITALQPEVDKLKT-LNVNKIIALGH--SGFEMDKLIAQKVRGVDVVVGGHSNTF---LYTGNP--PSK-EVPAGKYPFIV--TSDDG-----------------------------------------------------------------------RK------VPVVQAYAFGKY-----LG------YLKI-EFDE------------------------R-GN--VIS-S-HGNPILLN---------S-----------SIP---------EDPSIKADIN----KWRIKLDNY--QELG----KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHTDEMFWNHVSMCILNGGGIRSPIDER-NNGT--ITWENLAAVLPFGG-TFDLVQLKGSTLKKAFE---HSVH------RYGQ---------S-----TGEFLQVG-GIHVVY----D-------LSRKPGDRVVKLDVLCTKC----R-VPSYDPLKMDEVYKVILPNFLANGGDGFQMI-K--DEL--LRHDSGDQDINVVSTYIS------KM----KVIYPAVEGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 88.9424% -52 - C1 -4H2I 5NTD_HUMAN A:[4-520] ------------------------------------------------------------------LTILHTNDVHSRLEQTSEDS--S------K--CVDASRCMGGVARLFTK--VQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-V--Y--------KG-AEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANIKAKGPLASQISGLYL--PYKVL-----PVGD----EVVGIVGYTSKETP---FLSNPGT-NLVFE---DEITALQPEVDKLKT-LNVNKIIALGH--SGFEMDKLIAQKVRGVDVVVGGHSNTF---LYTGNPPS--K-EVPAGKYPFIV--TSDDG-----------------------------------------------------------------------RK------VPVVQAYAFGKY-----LG------YLKI-EFDE------------------------R-GN--VIS-S-HGNPILLD---------S-----------SIP---------EDPSIKADIN----KWRIKLDDYSTQELG----KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGG-TFDLVQLKGSTLKKAFE---HSVH------RYGQ---------S-----TGEFLQVG-GIHVVY----D-------LSRKPGDRVVKLDVLCTKC----R-VPSYDPLKMDEVYKVILPNFLANGGDGFQMI-K--DEL--LRHDSGDQDINVVSTYIS------KM----KVIYPAVEGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 88.8024% -53 - C1 -4H1Y 5NTD_HUMAN P:[23-542] ---------------------------------------------------------------PWELTILHTNDVHSRLEQTSEDS--S------K--CVDASRCMGGVARLFTK--VQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-V--Y--------KG-AEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANISASGPLASQISGLYL--PYKVL-----PVGD----EVVGIVGYTSKETP---FLSNPGT-NLVFE---DEITALQPEVDKLKT-LNVNKIIALGH--SGFEMDKLIAQKVRGVDVVVGGHSNTF---LYTGNPPS--K-EVPAGKYPFIV--TSDDG-----------------------------------------------------------------------RK------VPVVQAYAFGKY-----LG------YLKI-EFDE------------------------R-GN--VIS-S-HGNPILLD---------S-----------SIP---------EDPSIKADIN----KWRIKLDDYSTQELG----KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGG-TFDLVQLKGSTLKKAFE---HSVH------RYGQ---------S-----TGEFLQVG-GIHVVYDLSRKPGDRVVKL-----DVLCTSCRVPSYD-------P----LKMDEVYKVILPNFLANGGDGFQMI-K--DEL--LRHDSGDQDINVVSTYIS------KM----KVIYPAVEGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 88.7424% -52 - C1 -4H2B 5NTD_HUMAN A:[27-543] ------------------------------------------------------------------LTILHTNDVHSRLEQTSEDS--S------K--CVDASRCMGGVARLFTK--VQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-V--Y--------KG-AEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANISASGPLASQISGLYL--PYKVL-----PVGD----EVVGIVGYTSKETP---FLSNPGT-NLVFE---DEITALQPEVDKLKT-LNVNKIIALGH--SGFEMDKLIAQKVRGVDVVVGGHSNTF---LYTGNPPS--K-EVPAGKYPFIV--TSDDG-----------------------------------------------------------------------RK------VPVVQAYAFGKY-----LG------YLKI-EFDE------------------------R-GN--VIS-S-HGNPILLD---------S-----------SIP---------EDPSIKADIN----KWRIKLDDYSTQELG----KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGG-TFDLVQLKGSTLKKAFE---HSVH------RYGQ---------S-----TGEFLQVG-GIHVVYDLSRKPGDRVVKL-----DVLCTSCRVPSYD-------P----LKMDEVYKVILPNFLANGGDGFQMI-K--DEL--LRHDSGDQDINVVSTYIS------KM----KVIYPAVEGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 88.6424% -54 - C1 -4H2G 5NTD_HUMAN A:[23-542] ---------------------------------------------------------------PWELTILHTNDVHSRLEQTSEDS--S------K--CVDASRCMGGVARLFTK--VQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-V--Y--------KG-AEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANIKAKGPLASQISGLYL--PYKVL-----PVGD----EVVGIVGYTSKETP---FLSNPGT-NLVFE---DEITALQPEVDKLKT-LNVNKIIALGH--SGFEMDKLIAQKVRGVDVVVGGHSNTF---LYTGNPPS--K-EVPAGKYPFIV--TSDDG-----------------------------------------------------------------------RK------VPVVQAYAFGKY-----LG------YLKI-EFDE------------------------R-GN--VIS-S-HGNPILLD---------S-----------SIP---------EDPSIKADIN----KWRIKLDDYSTQELG----KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGG-TFDLVQLKGSTLKKAFE---HSVH------RYGQ---------S-----TGEFLQVG-GIHVVYDLSRKPGDRVVKL-----DVLCTACAVPSYD-------P----LKMDEVYKVILPNFLANGGDGFQMI-K--DEL--LRHDSGDQDINVVSTYIS------KM----KVIYPAVEGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 88.5924% -50 - C1 -4H2F 5NTD_HUMAN A:[23-542] ---------------------------------------------------------------PWELTILHTNDVHSRLEQTSEDS--S------K--CVDASRCMGGVARLFTK--VQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-V--Y--------KG-AEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANIKAKGPLASQISGLYL--PYKVL-----PVGD----EVVGIVGYTSKETP---FLSNPGT-NLVFE---DEITALQPEVDKLKT-LNVNKIIALGH--SGFEMDKLIAQKVRGVDVVVGGHSNTF---LYTGNPPS--K-EVPAGKYPFIV--TSDDG-----------------------------------------------------------------------RK------VPVVQAYAFGKY-----LG------YLKI-EFDE------------------------R-GN--VIS-S-HGNPILLD---------S-----------SIP---------EDPSIKADIN----KWRIKLDDYSTQELG----KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGG-TFDLVQLKGSTLKKAFE---HSVH------RYGQ---------S-----TGEFLQVG-GIHVVYDLSRKPGDRVVKL-----DVLCTACAVPSYD-------P----LKMDEVYKVILPNFLANGGDGFQMI-K--DEL--LRHDSGDQDINVVSTYIS------KM----KVIYPAVEGR-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 HHSearch 83.6024% -42 * C1 *3IVE ? A:[4-500] ---------------------------------------------------------------AKDVTIIYTNDLHAHVEPYKVPWIADG-----K--R-----DIGGWANITTL--VKQEKA----KN-----KATWFFDAGDYFTGPYI-SSL--T--------KG-KAIIDIMNTMPFDAVTIGNHEFD---HGWDNTLLQLSQ-----------------AKFPIVQGNIFYQN--SSK-SFWDK--PYTII-----EKDG----VKIGVIGLHGVFAFNDTVSAATRV-GIEAR---DEIKWLQRYIDELK--GKVDLTVALIH--E------------------------GV---PARQSSM---DVRRALDKDIQTA--------SQVKGLDILITGHAHV-------------GT--PE-------------------PIK------------VGN------TLILSTDSGGID-----VG------KLVL-DYKE------------------------KPHN--FTV---KNFELKTI---------YA--------D-EWK---------PDQQTKQVID----GWNKKLDEVVQQTVAQSPV--ELKR--------AYGESASLGNLAADAL-----LAAAG---KNTQLALTNSGGIRNEIP------AGAITMGGVISTFPFPN-ELVTMELTGKQLRSLME---H---------GASL---------------SNGVLQVSKGLEMKYDSSKP---------------VGQRVITLTLN----G-KP----IEDATVYHIATQSFLADGGDGFTAF-T--EGKARNIT-GGYYVYHAVVDYFK------AG----NTITDEQLNGMRVKDI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
64 Fugue 79.5220% -34 - C1 -3ZTV 5NTD_HAEIN A:[8-573] ---------------------------------------------------------H----KAVELSILHINDHHSYLEPHETRI--NLNGQQTK--V-----DIGGFSAVNAK--LNKLRKK---------YKNPLVLHAGDAITGTLYFT-L--F--------GG-SADAAVMNAGNFHYFTLGNHEFD---AGNEGLLKLLEPL-----------------KIPVLSANVIPDK--SSILYNKWK--PYDIF-----TVDG----EKIAIIGLDTVNKTV-NS-SSPGK-DVKFY---DEIATAQIMANALKQ-QGINKIILLSH--AGSE---------------------KN---IEIAQKVNDID-VIVTGDSHYLY--GNDELRSLKLP---VIYEYPLE-------------FK--NP-------------------N--------------GEP------VFVMEGWAYSAV-----VG------DLGV-KFSPEGIASITRKIPHVLMSSHKLQVKNSEGK--WAE-L-TGDERKKA---------L---------D-TLKSMKSISLDDHDAKTDKLIA----KYKSEKDRLAQEIVGVI-TGSAMP-GGSANRIPNKAGSNPEGSIATRFI-----AETMYNELKTVDLTIQNAGGVRADIL------PGNVTFNDAYTFLPFGN-TLYTYKMEGSLVKQVLE---D---------AMQF---------ALVDGSTGAFPYGA-GIRYEANETPN-------A-----EGK-RLVSVEVLNKTQQW-EP----IDDNKRYLVGTNAYVAGGKDGYKTF-G--KLF---------------------------------------------------------------------------------------------------------------------------NDPKYEGVDTYLP----DAESFIKFMKKHPHFEAYTSSN------------------------------------------------------------------------------VKFNAST
13 PsiBlast_PDB 79.0121% -53 - C1 -2USH USHA_ECOLI A:[26-531] ----------------------------------------------------------YEQDKTYKITVLHTNDHHGHFWRNEYGE--Y------G---------------LAAQKTLVDGIRKEVAAEGGSV----LLLSGGDINTGVPE-SDL--Q--------DA-EPDFRGMNLVGYDAMAIGNHEFD---NPLTVLRQ------QEKW-----------AKFPLLSANIYQKS--TGERL--FK--PWALF-----KRQD----LKIAVIGLTTDDTAK------YFT-DIEFRKPADEAKLVIQ---ELQQTEKPDIIIAATH--M------------------------GH---YDNGEHGSNAP-GDV--EMARAL---------PAGSLAMIVGGHSQDPVCMAAENKKQVDYV--PG-------------------T--------------PCKPDQQNGIWIVQAHEWGKYVGRADFE------FRNG-EMKM------------------------VNYQ--LIP-VNLKKKV---SERVLY---T---------P-EIA---------ENQQMISLLSPFQNKGKAQLEVKIGETNGRL-EGD---RDK------VRFVQTNMGRLILAAQ--------MDRTGAD--FAVMSGGGIRDSIEA------GDISYKNVLKVQPFGN-VVVYADMTGKEVIDYLTAV-A---------QMKP---------D-----SGAYPQFA-NVSFVAK-------------------KIK------------G-EP----VDPAKTYRMATLNFNATGGDGYPRLDN--KPG--YVN-TGFIDAEVLKAYIQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
43 HHSearch 78.5620% -56 - C1 -1HP1 USHA_ECOLI A:[3-500] ----------------------------------------------------Q----D----KTYKITVLHTNDHHGHFWRNE---------------Y-----GEYGLAAQKTL--VDGIRKEVAAEG-----GSVLLLSGGDINTGVPE-SDL--Q--------DA-EPDFRGMNLVGYDAMAIGNHEFD---NPLTVLRQQEKW-----------------AKFPLLSANIYQKS--TGER--LFK--PWALF-----KRQD----LKIAVIGLTTDDTAK-IGNPEYFT-DIEFR---KPADEAKLVIQELQQTEKPDIIIAATH--M------------------------GH---YDNGEHG------SNAPGDVEMA--RAL----PAGSLAMIVGGHSQD-------------PV--CMAAENKKQVDYVPGTPCKPDQ--------------QNG------IWIVQAHEWGKY-----VG------RADF-EFRN------------------------GEMK---M----VNYQLIPV---------NLKKKRVLYTP-EIA---------ENQQMISLLS----PFQNKGKAQLEVKIGETNG--RLEGD----RDKVRFVQTNMGRLILAAQ-----MDR-----TGADFAVMSGGGIRDSIE------AGDISYKNVLKVQPFGN-VVVYADMTGKEVIDYLT---A---------VAQMKP-------D-----SGAYPQFA-NVSFVAK--------------------DGKLNDLKIK----G-EP----VDPAKTYRMATLNFNATGGDGYPRL-D--NKPG-YVN-TGFIDAEVLKAYIQ------KSS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 77.6921% -50 - C1 -1USH USHA_ECOLI A:[26-531] ----------------------------------------------------------YEQDKTYKITVLHTNDHHGHFWRNEYGE--Y------G---------------LAAQKTLVDGIRKEVAAEGGSV----LLLSGGDINTGVPE-SDL--Q--------DA-EPDFRGMNLVGYDAMAIGNHEFD---NPLTVLRQ------QEKW-----------AKFPLLSANIYQKS--TGERL--FK--PWALF-----KRQD----LKIAVIGLTTDDTAK-IGNPEYFT-DIEFRKPADEAKLVIQ---ELQQTEKPDIIIAATH--M------------------------GH---YDNGEHGSNAP-GDV--EMARAL---------PAGSLAMIVGGHSQDPVCMAAENKKQVDYV--PG-------------------T--------------PCKPDQQNGIWIVQAHEWGKYVGRADFE------FRNG-EMKM------------------------VNYQ--LIP-VNLKK-----RVLY-----T---------P-EIA---------ENQQMISLLSPFQNKGKAQLEVKIGETNGRL-EGD---RDK------VRFVQTNMGRLILAAQ--------MDRTGAD--FAVMSGGGIRDSIEA------GDISYKNVLKVQPFGN-VVVYADMTGKEVIDYLTAV-A---------QMKP---------D-----SGAYPQFA-NVSFVAKDGKL-------N-----DLKIK------------G-EP----VDPAKTYRMATLNFNATGGDGYPRLDN--KPG--YVN-TGFIDAEVLKAYIQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 74.2826% -39 - C1 -3IVD ? A:[59-501] ---------------------------------------------------------------------------------------------------------------------------------------------AGDYF-TGPYISSL--T--------KG-KAIIDIMNTMPFDAVTIGNHEFD---HG---WDNTLLQLSQAKF-PIVQG-------------NIFYQN--S---SKSFWDKPYTII-----EKDG----VKIGVIGLHGVFAFN-DTVSAATRVGIEAR---DEIKWLQRYIDELKG-K-VDLTVALIHEGV------------------------PA---RQSSMGGT-----DVRRALDKDI--QTASQV---KGLDILITGHAH------------------------------------------------------VGT------PEPIKVGNTLIL-----ST------DSGGIDVGK------------------------LVLD--YKE-K-PHNFTVKN---------F---------E-LKT---------IYADEWKPDQ----QTKQVIDG-WNKKLDEV-VQQTVAQSPVELKRAYGESAS-LGNLAADA--------LLAAAGKNTQLALTNSGGIRNEIPA------GAITMGGVISTFPFPN-ELVTMELTGKQ-LRSLM---E---------HGAS---------L-----SNGVLQVSKGLEMKYDSSKP-------V-----GQ--RVITLTL-N----G-KP----IEDATVYHIATQSFLADGGDGFTAF-TEGKAR--NIT-GGYYVYHAVVDYFKAGNTITDEQLNGMRVKDIK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45 HHSearch 71.7418% -44 - C1 -2WDC ? A:[77-554] ----------------------------------------------------E----R----GTPLAYLLSYVDFVELARTF----------------G-----PIGGMGALTAL--IRDQKARVEAEG-----GKALVLDGGDTWTNSGL-SLL--T--------RG-EAVVRWQNLVGVDHMV-SHWEWT---LGRERVEELLGL-----------------FRGEFLSYNIVDDL--FGDP--LFP--AYRIH-----RVGP----YALAVVGASYPYVKV-SHPESFTE-GLSFA---LDERRLQEAVDKARA-EGANAVVLLSH--N------------------------GM---QLD----------------AALA--E------RIRGIDLILSGHTHD-------------LT--PRPW-----------------R--------------VGK------TWIVAGSAAGKA-----LM------RVDL-KLWK------------------------GG-----IA-N-LRVRVLPV---------LA--------E-HLP---------KAEDVEAFLK----AQLAPHQDHLFTPLAVSET--LLYK--------RDTLYSTWDQLVGEAV-----KAIY------PEVEVVFSPAVRWGTTIL---PGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLE---D---------IASNVFTSDPFYQQ-----GGDVSRVF-GLRYVLDPDAP---------------TGERVREVEVG----G-RP----LDPNRRYLAAAYGGRLQ------RV-G--EAK--PGY-EPRPIYEVLAEYLR------SV----GRVRVRPEPNVKVIGRN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
68 Fugue 71.0617% -34 - C1 -2WDC ? A:[21-562] YDLPPYGDATLLYFSDLHGQAFPHYFMEPPNLIAPKPLMGRPGYLTGEAILRYYGVER----GTPLAYLLSYVDFVELARTFGP---------------------IGGMGALTAL--IRDQKARVEAEGG-----KALVLDGGDTWTNS-GLSLL--T--------RG-EAVVRWQNLVGVD-HMVSHWEWT---LGRERVEELLGLF-----------------RGEFLSYNIVDDL--FGD--PLFP--AYRIH-----RVGP----YALAVVGASYPYVKV-SHPESFTE-GLSFA---LDERRLQEAVDKARA-EGANAVVLLSH---------------------------------------------------NGMQ--LDAALAERIRGIDLILSGHTHD-------------LTPRPW-------------------R--------------VGK------TWIVAGSAAGKA-----LM------RVDL-KLWK--------------------------GG--IAN-L-RVRVLPVL---------A---------E-HLP---------KAEDVEAFLK----AQLAPHQDHLFTPLAVS-ETLLYKRDTL---------YSTWDQLVGEAV-----KAI----YPEVEVVFSPAVRWGTTILPG-----QAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLE---DIASNVFTSDPFYQ---------Q-----GGDVSRVF-GLRYVLDPDAP-------T-----GERVREVEV---G----G-RP----LDPNRRYLAAAY-----GGRLQRVG-E--AKP--------------------------------------------------------------------------------------------------------------GYEPRPIYEVLAEYLRSVGRVRVRPEP--------NVKVIGRNYRLPEVTG--------------------------------------------------------------------------------------
47 HHSearch 69.7824% -50 - C1 -3JYF ? A:[4-338] ---------------------------------------------------------A----ATVDLRIMETTDLHSNMMDFDYYK--D------AA-T-----EKFGLVRTASL--IEQARA----EV-----KNSVLVDNGDVIQGSPLG-DY--MAAKGLKEGDV-HPVYKAMNTLNYAVGNLGNHEFN---YGLDFLHKALAG-----------------AKFPYVNANIIDAK--TGKP--MFT--PYLIQDTRVVDSDGQIHTLRIGYIGFVPPQIMT-WDKANLNG-KVTVN---DITETARKYIPEMRA-KGADVVVVVAH--S------------------------GL---SADPYQA-------MAENSVYYL--------SQVPGVDAIMFGHAHA-------------VF--PG-------------------KDFANIKGADIAKGTLNG------VPAVMPGMWGDH-----LG------VVDL-VLNN------------------------DSGK--WQVTQ-SKAEARPI---------YDAVAKK---S-LAA---------EDGKLVSVLK----ADHDATREFVS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 69.5721% -55 - C1 -1HPU USHA_ECOLI A:[69-506] -------------------------------------------------------------------------------------------------------------------------------------------------------------L--------QDAEPDFRGMNLVGYDAMAIGNHEFD---NPLTVLRQ------QEKW-----------AKFPLLSANIYQKS--TGERL--FK--PWALF-----KRQD----LKIAVIGLTTDDTAK-IGNPEYFT-DIEFRKPADEAKLVIQ---ELQQTEKPDIIIAATH--M------------------------GH---YDNGEHGSNAP-GDV--EMARAL---------PAGSLAMIVGGHSQDPVCMAAENKKQVDYV--PG-------------------T--------------PCKPDQQNGIWIVQAHEWGKYVGRADFE------FRNG-EMKM------------------------VNYQ--LIP-VNLKKKVTWEDGKSERVLYT---------P-EIA---------ENQQMISLLSPFQNKGKAQLEVKIGETNGRL-EGD---RDK------VRFVQTNMGRLILAAQ--------MDRTGAD--FAVMSGGGIRDSIEA------GDISYKNVLKVQPFGN-VVVYADMTGKEVIDYLTAV-A---------QMKP---------D-----SGAYPQFA-NVSFVAKDGKL-------N-----DLKIK------------G-EP----VDPAKTYRMATLNFNATGGDGYPRLDN--KPG--YVN-TGFIDAEVLKAYIQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 69.0121% -58 - C1 -1OI8 USHA_ECOLI A:[69-506] -------------------------------------------------------------------------------------------------------------------------------------------------------------L--------QDAEPDFRGMNLVGYDAMAIGNHEFD---NPLTVLRQ------QEKW-----------AKFPLLSANIYQKS--TGERL--FK--PWALF-----KRQD----LKIAVIGLTTDDTAK-IGNPEYFT-DIEFRKPADEAKLVIQ---ELQQTEKPDIIIAATH--M------------------------GH---YDNGEHGSNAP-GDV--EMARAL---------PAGSLAMIVGGHSQDPVCMAAENKKQVDYV--PG-------------------T--------------PCKPDQQNGIWIVQAHEWGKYVGRADFE------FRNG-EMKM------------------------VNYQ--LIP-VNLKKKVTWEDGKSERVLYT---------P-EIA---------ENQQMISLLSPFQNKGKAQLEVKIGETNGRL-EGD---RDK------VRFVQTNMGRLILAAQ--------MDRTGAD--FAVMSGGGIRDSIEA------GDISYKNVCKVQPFGN-VVVYADMTGKEVIDYLTAV-A---------QMKP---------D-----SGAYPQFA-NVSFVAKDGKL-------N-----DLKIK------------G-EP----VDPAKTYRMATLNFNATGGDGYPRLDN--KPG--YVN-TGFIDAEVLKAYIQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 69.0121% -58 - C1 -1OID USHA_ECOLI A:[69-506] -------------------------------------------------------------------------------------------------------------------------------------------------------------L--------QDAEPDFRGMNLVGYDAMAIGNHEFD---NPLTVLRQ------QEKW-----------AKFPLLSANIYQKS--TGERL--FK--PWALF-----KRQD----LKIAVIGLTTDDTAK-IGNPEYFT-DIEFRKPADEAKLVIQ---ELQQTEKPDIIIAATH--M------------------------GH---YDNGEHGCNAP-GDV--EMARAL---------PAGSLAMIVGGHSQDPVCMAAENKKQVDYV--PG-------------------T--------------PCKPDQQNGIWIVQAHEWGKYVGRADFE------FRNG-EMKM------------------------VNYQ--LIP-VNLKKKVTWEDGKSERVLYT---------P-EIA---------ENQQMISLLSPFQNKGKAQLEVKIGETNGRL-EGD---RDK------VRFVQTNMGRLILAAQ--------MDRTGAD--FAVMSGGGIRDSIEA------GDISYKNVLKVQPFGN-VVVYADMTGKEVIDYLTAV-A---------QMKP---------D-----SGAYPQFA-NVSFVAKDGKL-------N-----DLKIK------------G-EP----VDPAKTYRMATLNFNATGGDGYPRLDN--KCG--YVN-TGFIDAEVLKAYIQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------